EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016262 (Gene tree)
Gene ID: 110330007
Gene Symbol: Mrpl40
Alias: Nlvcf
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 4337 bases
Position: chr12:14621418-14625754
Accession: 110330007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0028240	MRP-L28	PF09812.9	7e-63	1	1
MGP_PahariEiJ_P0028239	MRP-L28	PF09812.9	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0028239	-	1099	-	MGP_PahariEiJ_P0028239	206 (aa)	XP_021065601	UPI000A30C979
MGP_PahariEiJ_T0028240	-	773	-	MGP_PahariEiJ_P0028240	162 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0016262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSG00000185608	MRPL40	100	77.184	Homo_sapiens
MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	ENSAPOG00000021291	mrpl40	82	61.905	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016262	Mrpl40	100	79.012	ENSAMEG00000011421	MRPL40	100	75.728	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016262	Mrpl40	75	56.198	ENSACIG00000006717	MRPL40	74	52.703	Amphilophus_citrinellus
MGP_PahariEiJ_G0016262	Mrpl40	97	63.694	ENSACIG00000006672	mrpl40	99	53.883	Amphilophus_citrinellus
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSAOCG00000003216	mrpl40	82	59.524	Amphiprion_ocellaris
MGP_PahariEiJ_G0016262	Mrpl40	97	61.783	ENSAPEG00000017401	mrpl40	82	58.929	Amphiprion_percula
MGP_PahariEiJ_G0016262	Mrpl40	96	62.581	ENSATEG00000020753	mrpl40	91	62.581	Anabas_testudineus
MGP_PahariEiJ_G0016262	Mrpl40	98	54.455	ENSAPLG00000004002	MRPL40	100	55.446	Anas_platyrhynchos
MGP_PahariEiJ_G0016262	Mrpl40	97	63.694	ENSACAG00000001053	MRPL40	88	60.795	Anolis_carolinensis
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSANAG00000026579	MRPL40	100	77.184	Aotus_nancymaae
MGP_PahariEiJ_G0016262	Mrpl40	97	63.057	ENSACLG00000011106	mrpl40	100	52.451	Astatotilapia_calliptera
MGP_PahariEiJ_G0016262	Mrpl40	97	59.236	ENSAMXG00000029691	mrpl40	97	52.764	Astyanax_mexicanus
MGP_PahariEiJ_G0016262	Mrpl40	99	78.261	ENSBTAG00000019891	MRPL40	100	71.359	Bos_taurus
MGP_PahariEiJ_G0016262	Mrpl40	93	31.410	WBGene00018793	mrpl-40	83	31.410	Caenorhabditis_elegans
MGP_PahariEiJ_G0016262	Mrpl40	100	82.716	ENSCJAG00000001584	MRPL40	100	77.778	Callithrix_jacchus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSCAFG00020007995	MRPL40	100	76.214	Canis_lupus_dingo
MGP_PahariEiJ_G0016262	Mrpl40	100	77.778	ENSCHIG00000000131	-	100	71.845	Capra_hircus
MGP_PahariEiJ_G0016262	Mrpl40	78	70.635	ENSCHIG00000026872	-	100	64.706	Capra_hircus
MGP_PahariEiJ_G0016262	Mrpl40	100	84.568	ENSTSYG00000014747	MRPL40	100	77.184	Carlito_syrichta
MGP_PahariEiJ_G0016262	Mrpl40	88	84.615	ENSCAPG00000012876	MRPL40	100	84.615	Cavia_aperea
MGP_PahariEiJ_G0016262	Mrpl40	99	85.093	ENSCPOG00000026802	MRPL40	100	80.488	Cavia_porcellus
MGP_PahariEiJ_G0016262	Mrpl40	96	81.410	ENSCCAG00000037694	MRPL40	100	77.000	Cebus_capucinus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSCATG00000031418	-	100	75.728	Cercocebus_atys
MGP_PahariEiJ_G0016262	Mrpl40	100	79.630	ENSCATG00000043592	-	96	78.462	Cercocebus_atys
MGP_PahariEiJ_G0016262	Mrpl40	100	86.420	ENSCLAG00000016629	MRPL40	100	82.039	Chinchilla_lanigera
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSCSAG00000011593	MRPL40	100	76.214	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016262	Mrpl40	90	69.178	ENSCHOG00000008751	MRPL40	98	71.264	Choloepus_hoffmanni
MGP_PahariEiJ_G0016262	Mrpl40	97	66.879	ENSCPBG00000010618	MRPL40	92	63.636	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016262	Mrpl40	78	35.433	ENSCSAVG00000001505	-	63	35.433	Ciona_savignyi
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSCANG00000038600	MRPL40	99	81.183	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016262	Mrpl40	100	89.506	ENSCGRG00001019957	Mrpl40	100	88.835	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016262	Mrpl40	100	89.506	ENSCGRG00000001245	Mrpl40	100	88.835	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016262	Mrpl40	80	39.231	ENSCSEG00000012296	-	67	40.800	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	ENSCSEG00000019750	mrpl40	100	49.758	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSCVAG00000018229	mrpl40	77	62.658	Cyprinodon_variegatus
MGP_PahariEiJ_G0016262	Mrpl40	97	57.325	ENSDARG00000043554	mrpl40	88	56.000	Danio_rerio
MGP_PahariEiJ_G0016262	Mrpl40	100	69.417	ENSDNOG00000038360	-	100	69.417	Dasypus_novemcinctus
MGP_PahariEiJ_G0016262	Mrpl40	100	83.951	ENSDORG00000002949	Mrpl40	100	81.553	Dipodomys_ordii
MGP_PahariEiJ_G0016262	Mrpl40	91	40.909	FBgn0037892	mRpL40	79	40.909	Drosophila_melanogaster
MGP_PahariEiJ_G0016262	Mrpl40	90	50.000	ENSETEG00000006816	-	99	50.000	Echinops_telfairi
MGP_PahariEiJ_G0016262	Mrpl40	100	79.630	ENSEASG00005010493	MRPL40	99	74.510	Equus_asinus_asinus
MGP_PahariEiJ_G0016262	Mrpl40	100	79.012	ENSECAG00000009876	MRPL40	97	79.012	Equus_caballus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSEEUG00000009268	MRPL40	99	75.728	Erinaceus_europaeus
MGP_PahariEiJ_G0016262	Mrpl40	97	59.236	ENSELUG00000009281	mrpl40	82	57.738	Esox_lucius
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSFCAG00000002752	MRPL40	100	76.699	Felis_catus
MGP_PahariEiJ_G0016262	Mrpl40	90	53.514	ENSFALG00000007981	MRPL40	98	54.822	Ficedula_albicollis
MGP_PahariEiJ_G0016262	Mrpl40	100	84.568	ENSFDAG00000020940	MRPL40	100	84.568	Fukomys_damarensis
MGP_PahariEiJ_G0016262	Mrpl40	97	61.146	ENSGALG00000053063	MRPL40	59	56.345	Gallus_gallus
MGP_PahariEiJ_G0016262	Mrpl40	97	61.146	ENSGAFG00000000522	mrpl40	77	61.392	Gambusia_affinis
MGP_PahariEiJ_G0016262	Mrpl40	97	68.790	ENSGAGG00000020728	MRPL40	85	64.773	Gopherus_agassizii
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSGGOG00000012336	MRPL40	100	77.184	Gorilla_gorilla
MGP_PahariEiJ_G0016262	Mrpl40	97	63.057	ENSHBUG00000000404	mrpl40	100	53.431	Haplochromis_burtoni
MGP_PahariEiJ_G0016262	Mrpl40	100	82.716	ENSHGLG00000018525	MRPL40	100	82.716	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016262	Mrpl40	100	82.716	ENSHGLG00100009563	MRPL40	100	77.184	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016262	Mrpl40	97	57.962	ENSHCOG00000005731	mrpl40	100	48.768	Hippocampus_comes
MGP_PahariEiJ_G0016262	Mrpl40	97	59.236	ENSIPUG00000020288	Mrpl40	83	56.497	Ictalurus_punctatus
MGP_PahariEiJ_G0016262	Mrpl40	100	87.037	ENSSTOG00000002887	MRPL40	100	81.553	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016262	Mrpl40	100	85.802	ENSJJAG00000017905	Mrpl40	100	83.010	Jaculus_jaculus
MGP_PahariEiJ_G0016262	Mrpl40	97	65.605	ENSKMAG00000003717	mrpl40	88	60.894	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016262	Mrpl40	97	59.236	ENSLBEG00000025203	mrpl40	96	54.945	Labrus_bergylta
MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	ENSLACG00000015070	MRPL40	98	56.000	Latimeria_chalumnae
MGP_PahariEiJ_G0016262	Mrpl40	96	65.385	ENSLOCG00000001879	mrpl40	87	61.582	Lepisosteus_oculatus
MGP_PahariEiJ_G0016262	Mrpl40	100	82.099	ENSLAFG00000011061	MRPL40	100	78.155	Loxodonta_africana
MGP_PahariEiJ_G0016262	Mrpl40	100	78.395	ENSMFAG00000001495	-	98	76.382	Macaca_fascicularis
MGP_PahariEiJ_G0016262	Mrpl40	100	78.395	ENSMFAG00000039890	-	92	79.191	Macaca_fascicularis
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSMFAG00000032018	-	100	75.728	Macaca_fascicularis
MGP_PahariEiJ_G0016262	Mrpl40	100	77.778	ENSMMUG00000006218	-	96	78.613	Macaca_mulatta
MGP_PahariEiJ_G0016262	Mrpl40	100	76.543	ENSMMUG00000030886	-	95	75.897	Macaca_mulatta
MGP_PahariEiJ_G0016262	Mrpl40	100	79.012	ENSMNEG00000041171	-	98	76.884	Macaca_nemestrina
MGP_PahariEiJ_G0016262	Mrpl40	100	78.395	ENSMNEG00000034050	-	100	74.272	Macaca_nemestrina
MGP_PahariEiJ_G0016262	Mrpl40	92	78.523	ENSMNEG00000040492	-	98	63.682	Macaca_nemestrina
MGP_PahariEiJ_G0016262	Mrpl40	100	79.630	ENSMLEG00000032552	-	96	77.949	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSMLEG00000030926	-	99	80.645	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016262	Mrpl40	100	78.395	ENSMLEG00000009022	-	92	79.191	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSMAMG00000014249	mrpl40	100	53.398	Mastacembelus_armatus
MGP_PahariEiJ_G0016262	Mrpl40	97	63.057	ENSMZEG00005009853	mrpl40	100	52.451	Maylandia_zebra
MGP_PahariEiJ_G0016262	Mrpl40	96	61.538	ENSMGAG00000001177	MRPL40	100	61.538	Meleagris_gallopavo
MGP_PahariEiJ_G0016262	Mrpl40	100	90.123	ENSMAUG00000015350	Mrpl40	100	88.835	Mesocricetus_auratus
MGP_PahariEiJ_G0016262	Mrpl40	100	83.951	ENSMICG00000046066	MRPL40	100	79.126	Microcebus_murinus
MGP_PahariEiJ_G0016262	Mrpl40	100	89.506	ENSMOCG00000016970	Mrpl40	100	89.320	Microtus_ochrogaster
MGP_PahariEiJ_G0016262	Mrpl40	96	63.226	ENSMMOG00000012861	mrpl40	84	63.226	Mola_mola
MGP_PahariEiJ_G0016262	Mrpl40	97	71.338	ENSMODG00000010070	MRPL40	98	67.416	Monodelphis_domestica
MGP_PahariEiJ_G0016262	Mrpl40	97	59.236	ENSMALG00000020778	mrpl40	100	49.756	Monopterus_albus
MGP_PahariEiJ_G0016262	Mrpl40	100	96.914	MGP_CAROLIEiJ_G0020557	Mrpl40	100	96.914	Mus_caroli
MGP_PahariEiJ_G0016262	Mrpl40	100	95.679	ENSMUSG00000022706	Mrpl40	100	95.679	Mus_musculus
MGP_PahariEiJ_G0016262	Mrpl40	100	95.679	MGP_SPRETEiJ_G0021452	Mrpl40	100	95.679	Mus_spretus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSMPUG00000003865	MRPL40	100	78.155	Mustela_putorius_furo
MGP_PahariEiJ_G0016262	Mrpl40	99	81.366	ENSMLUG00000002456	-	100	78.641	Myotis_lucifugus
MGP_PahariEiJ_G0016262	Mrpl40	99	81.366	ENSMLUG00000024620	-	100	78.641	Myotis_lucifugus
MGP_PahariEiJ_G0016262	Mrpl40	100	86.420	ENSNGAG00000000304	Mrpl40	93	86.170	Nannospalax_galili
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSNLEG00000005372	MRPL40	100	76.699	Nomascus_leucogenys
MGP_PahariEiJ_G0016262	Mrpl40	91	52.381	ENSMEUG00000003868	-	91	52.381	Notamacropus_eugenii
MGP_PahariEiJ_G0016262	Mrpl40	100	53.398	ENSOPRG00000002606	MRPL40	100	53.398	Ochotona_princeps
MGP_PahariEiJ_G0016262	Mrpl40	100	84.568	ENSODEG00000017051	MRPL40	100	80.583	Octodon_degus
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSONIG00000014393	mrpl40	100	51.961	Oreochromis_niloticus
MGP_PahariEiJ_G0016262	Mrpl40	99	83.230	ENSOCUG00000009859	MRPL40	67	80.645	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	ENSORLG00000002574	mrpl40	85	64.968	Oryzias_latipes
MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	ENSORLG00020005727	mrpl40	77	65.190	Oryzias_latipes_hni
MGP_PahariEiJ_G0016262	Mrpl40	97	63.694	ENSORLG00015015422	mrpl40	77	63.924	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016262	Mrpl40	97	65.605	ENSOMEG00000017632	mrpl40	86	61.364	Oryzias_melastigma
MGP_PahariEiJ_G0016262	Mrpl40	100	83.333	ENSOGAG00000030071	MRPL40	99	81.720	Otolemur_garnettii
MGP_PahariEiJ_G0016262	Mrpl40	99	75.776	ENSOARG00000017561	MRPL40	96	68.342	Ovis_aries
MGP_PahariEiJ_G0016262	Mrpl40	100	82.099	ENSPPAG00000030349	MRPL40	100	77.670	Pan_paniscus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSPPRG00000004672	MRPL40	100	77.184	Panthera_pardus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSPTIG00000003393	MRPL40	90	80.645	Panthera_tigris_altaica
MGP_PahariEiJ_G0016262	Mrpl40	100	82.099	ENSPTRG00000014061	MRPL40	100	77.670	Pan_troglodytes
MGP_PahariEiJ_G0016262	Mrpl40	100	79.012	ENSPANG00000007370	-	100	74.757	Papio_anubis
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSPANG00000000595	-	96	78.974	Papio_anubis
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSPKIG00000024494	mrpl40	87	59.322	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016262	Mrpl40	97	64.331	ENSPSIG00000003055	MRPL40	100	62.651	Pelodiscus_sinensis
MGP_PahariEiJ_G0016262	Mrpl40	97	59.873	ENSPMGG00000018388	mrpl40	95	54.190	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016262	Mrpl40	100	92.593	ENSPEMG00000017933	Mrpl40	100	90.291	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016262	Mrpl40	99	69.565	ENSPCIG00000025479	MRPL40	100	60.577	Phascolarctos_cinereus
MGP_PahariEiJ_G0016262	Mrpl40	97	60.625	ENSPFOG00000012506	mrpl40	75	60.870	Poecilia_formosa
MGP_PahariEiJ_G0016262	Mrpl40	97	61.783	ENSPLAG00000017335	mrpl40	77	62.025	Poecilia_latipinna
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSPMEG00000003881	mrpl40	77	62.658	Poecilia_mexicana
MGP_PahariEiJ_G0016262	Mrpl40	97	63.057	ENSPREG00000011448	mrpl40	77	63.291	Poecilia_reticulata
MGP_PahariEiJ_G0016262	Mrpl40	100	81.481	ENSPPYG00000011578	MRPL40	99	81.720	Pongo_abelii
MGP_PahariEiJ_G0016262	Mrpl40	100	62.621	ENSPCAG00000007834	MRPL40	100	62.621	Procavia_capensis
MGP_PahariEiJ_G0016262	Mrpl40	100	83.951	ENSPCOG00000014413	MRPL40	100	80.097	Propithecus_coquereli
MGP_PahariEiJ_G0016262	Mrpl40	52	73.832	ENSPVAG00000006414	-	50	74.757	Pteropus_vampyrus
MGP_PahariEiJ_G0016262	Mrpl40	97	63.057	ENSPNYG00000008216	mrpl40	100	52.451	Pundamilia_nyererei
MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	ENSPNAG00000000310	mrpl40	99	60.645	Pygocentrus_nattereri
MGP_PahariEiJ_G0016262	Mrpl40	100	94.660	ENSRNOG00000049686	Mrpl40	100	94.660	Rattus_norvegicus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSRBIG00000023060	MRPL40	95	79.487	Rhinopithecus_bieti
MGP_PahariEiJ_G0016262	Mrpl40	100	79.630	ENSRROG00000043837	MRPL40	95	78.462	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSSBOG00000031050	MRPL40	100	76.699	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016262	Mrpl40	96	70.513	ENSSHAG00000010239	MRPL40	99	69.811	Sarcophilus_harrisii
MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	ENSSFOG00015014220	mrpl40	97	60.209	Scleropages_formosus
MGP_PahariEiJ_G0016262	Mrpl40	97	56.688	ENSSMAG00000006340	mrpl40	100	47.368	Scophthalmus_maximus
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSSDUG00000022994	mrpl40	100	53.171	Seriola_dumerili
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSSLDG00000009671	mrpl40	96	55.330	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016262	Mrpl40	100	80.864	ENSSARG00000003051	MRPL40	100	78.155	Sorex_araneus
MGP_PahariEiJ_G0016262	Mrpl40	97	61.146	ENSSPUG00000015559	MRPL40	90	57.778	Sphenodon_punctatus
MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	ENSSPAG00000015481	mrpl40	100	52.683	Stegastes_partitus
MGP_PahariEiJ_G0016262	Mrpl40	100	80.247	ENSSSCG00000034014	MRPL40	100	72.816	Sus_scrofa
MGP_PahariEiJ_G0016262	Mrpl40	77	60.484	ENSTGUG00000008534	MRPL40	98	60.927	Taeniopygia_guttata
MGP_PahariEiJ_G0016262	Mrpl40	97	65.605	ENSTRUG00000025904	mrpl40	78	65.605	Takifugu_rubripes
MGP_PahariEiJ_G0016262	Mrpl40	100	77.160	ENSTTRG00000014932	MRPL40	96	74.359	Tursiops_truncatus
MGP_PahariEiJ_G0016262	Mrpl40	100	79.012	ENSUAMG00000007667	MRPL40	100	76.699	Ursus_americanus
MGP_PahariEiJ_G0016262	Mrpl40	90	77.931	ENSUMAG00000006804	MRPL40	99	75.661	Ursus_maritimus
MGP_PahariEiJ_G0016262	Mrpl40	100	65.031	ENSVVUG00000020719	-	94	61.576	Vulpes_vulpes
MGP_PahariEiJ_G0016262	Mrpl40	100	78.395	ENSVVUG00000025360	-	100	74.272	Vulpes_vulpes
MGP_PahariEiJ_G0016262	Mrpl40	97	58.599	ENSXETG00000018600	mrpl40	87	56.897	Xenopus_tropicalis
MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	ENSXCOG00000002135	mrpl40	77	60.759	Xiphophorus_couchianus
MGP_PahariEiJ_G0016262	Mrpl40	97	60.510	ENSXMAG00000014595	mrpl40	77	60.759	Xiphophorus_maculatus