EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016352 (Gene tree)
Gene ID: 110329655
Gene Symbol: Lsg1
Alias: D16Bwg1547e
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 28844 bases
Position: chr12:25664499-25693342
Accession: 110329655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0028578	MMR_HSR1	PF01926.23	6.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0028585	-	613	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028584	-	704	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028579	-	2278	-	MGP_PahariEiJ_P0028579	36 (aa)	-	-
MGP_PahariEiJ_T0028578	-	3206	-	MGP_PahariEiJ_P0028578	649 (aa)	XP_021065078	UPI000A308C7B
MGP_PahariEiJ_T0028582	-	2735	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028583	-	709	-	MGP_PahariEiJ_P0028583	236 (aa)	-	-
MGP_PahariEiJ_T0028580	-	2277	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028581	-	772	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0016352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016352	Lsg1	100	81.639	ENSG00000041802	LSG1	92	92.683	Homo_sapiens
MGP_PahariEiJ_G0016352	Lsg1	100	64.832	ENSAPOG00000009694	lsg1	99	65.421	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016352	Lsg1	100	79.576	ENSAMEG00000009343	LSG1	98	79.692	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016352	Lsg1	98	63.889	ENSACIG00000012406	lsg1	98	63.777	Amphilophus_citrinellus
MGP_PahariEiJ_G0016352	Lsg1	100	64.319	ENSAOCG00000016066	lsg1	99	64.899	Amphiprion_ocellaris
MGP_PahariEiJ_G0016352	Lsg1	100	65.237	ENSAPEG00000003252	lsg1	99	65.211	Amphiprion_percula
MGP_PahariEiJ_G0016352	Lsg1	98	65.777	ENSATEG00000011794	lsg1	98	65.781	Anabas_testudineus
MGP_PahariEiJ_G0016352	Lsg1	94	64.207	ENSACAG00000004222	LSG1	99	64.331	Anolis_carolinensis
MGP_PahariEiJ_G0016352	Lsg1	100	83.005	ENSANAG00000021153	LSG1	98	83.025	Aotus_nancymaae
MGP_PahariEiJ_G0016352	Lsg1	100	64.036	ENSACLG00000000520	lsg1	98	64.441	Astatotilapia_calliptera
MGP_PahariEiJ_G0016352	Lsg1	99	64.145	ENSAMXG00000008271	lsg1	99	64.407	Astyanax_mexicanus
MGP_PahariEiJ_G0016352	Lsg1	100	81.317	ENSBTAG00000008461	LSG1	98	80.871	Bos_taurus
MGP_PahariEiJ_G0016352	Lsg1	69	49.505	WBGene00016907	C53H9.2	80	54.815	Caenorhabditis_elegans
MGP_PahariEiJ_G0016352	Lsg1	100	82.853	ENSCJAG00000013962	LSG1	98	82.998	Callithrix_jacchus
MGP_PahariEiJ_G0016352	Lsg1	95	80.192	ENSCAFG00000013445	LSG1	100	80.192	Canis_familiaris
MGP_PahariEiJ_G0016352	Lsg1	100	78.884	ENSCAFG00020002216	LSG1	99	79.647	Canis_lupus_dingo
MGP_PahariEiJ_G0016352	Lsg1	100	81.957	ENSCHIG00000015769	LSG1	98	81.406	Capra_hircus
MGP_PahariEiJ_G0016352	Lsg1	100	83.030	ENSTSYG00000001447	LSG1	98	82.897	Carlito_syrichta
MGP_PahariEiJ_G0016352	Lsg1	95	77.670	ENSCAPG00000009856	LSG1	100	76.748	Cavia_aperea
MGP_PahariEiJ_G0016352	Lsg1	100	82.094	ENSCCAG00000035744	LSG1	98	82.099	Cebus_capucinus
MGP_PahariEiJ_G0016352	Lsg1	100	82.576	ENSCATG00000042060	LSG1	98	81.019	Cercocebus_atys
MGP_PahariEiJ_G0016352	Lsg1	100	82.727	ENSCSAG00000008796	LSG1	90	82.562	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016352	Lsg1	100	69.729	ENSCPBG00000015941	LSG1	82	70.200	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016352	Lsg1	73	63.158	ENSCING00000007079	-	91	63.158	Ciona_intestinalis
MGP_PahariEiJ_G0016352	Lsg1	68	63.542	ENSCSAVG00000002514	-	87	62.245	Ciona_savignyi
MGP_PahariEiJ_G0016352	Lsg1	100	82.121	ENSCANG00000030709	LSG1	98	82.253	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016352	Lsg1	100	88.515	ENSCGRG00001019846	Lsg1	98	88.785	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016352	Lsg1	100	88.515	ENSCGRG00000014617	Lsg1	98	88.785	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016352	Lsg1	98	64.330	ENSCSEG00000008522	lsg1	98	63.411	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016352	Lsg1	97	66.351	ENSCVAG00000002484	lsg1	98	66.301	Cyprinodon_variegatus
MGP_PahariEiJ_G0016352	Lsg1	100	67.025	ENSDARG00000015352	lsg1	98	67.344	Danio_rerio
MGP_PahariEiJ_G0016352	Lsg1	100	79.787	ENSDNOG00000006224	LSG1	98	79.444	Dasypus_novemcinctus
MGP_PahariEiJ_G0016352	Lsg1	99	48.476	FBgn0266284	Ns3	93	57.371	Drosophila_melanogaster
MGP_PahariEiJ_G0016352	Lsg1	88	84.211	ENSETEG00000003888	LSG1	88	87.692	Echinops_telfairi
MGP_PahariEiJ_G0016352	Lsg1	88	56.324	ENSEBUG00000003119	lsg1	85	55.932	Eptatretus_burgeri
MGP_PahariEiJ_G0016352	Lsg1	100	82.121	ENSEASG00005000678	LSG1	98	81.664	Equus_asinus_asinus
MGP_PahariEiJ_G0016352	Lsg1	100	82.576	ENSECAG00000017659	LSG1	98	82.126	Equus_caballus
MGP_PahariEiJ_G0016352	Lsg1	87	79.487	ENSEEUG00000015217	LSG1	85	79.487	Erinaceus_europaeus
MGP_PahariEiJ_G0016352	Lsg1	100	63.093	ENSELUG00000023973	lsg1	99	63.142	Esox_lucius
MGP_PahariEiJ_G0016352	Lsg1	100	81.515	ENSFCAG00000024957	LSG1	98	81.664	Felis_catus
MGP_PahariEiJ_G0016352	Lsg1	99	64.448	ENSFALG00000007210	LSG1	94	67.154	Ficedula_albicollis
MGP_PahariEiJ_G0016352	Lsg1	100	79.601	ENSFDAG00000017373	LSG1	98	79.563	Fukomys_damarensis
MGP_PahariEiJ_G0016352	Lsg1	97	64.330	ENSFHEG00000003680	lsg1	98	64.451	Fundulus_heteroclitus
MGP_PahariEiJ_G0016352	Lsg1	82	71.429	ENSGMOG00000015834	lsg1	89	69.435	Gadus_morhua
MGP_PahariEiJ_G0016352	Lsg1	99	65.120	ENSGALG00000007058	LSG1	86	65.854	Gallus_gallus
MGP_PahariEiJ_G0016352	Lsg1	97	66.244	ENSGAFG00000015831	lsg1	98	65.881	Gambusia_affinis
MGP_PahariEiJ_G0016352	Lsg1	98	63.509	ENSGACG00000009323	lsg1	98	63.060	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016352	Lsg1	100	81.818	ENSGGOG00000000520	LSG1	98	81.636	Gorilla_gorilla
MGP_PahariEiJ_G0016352	Lsg1	100	63.927	ENSHBUG00000005659	lsg1	98	62.614	Haplochromis_burtoni
MGP_PahariEiJ_G0016352	Lsg1	100	77.829	ENSHGLG00000017390	LSG1	98	78.383	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016352	Lsg1	100	77.676	ENSHGLG00100018587	LSG1	98	78.227	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016352	Lsg1	97	64.319	ENSHCOG00000016848	lsg1	98	63.850	Hippocampus_comes
MGP_PahariEiJ_G0016352	Lsg1	100	65.846	ENSIPUG00000008631	lsg1	98	65.361	Ictalurus_punctatus
MGP_PahariEiJ_G0016352	Lsg1	81	79.412	ENSSTOG00000010234	LSG1	93	76.846	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016352	Lsg1	99	82.615	ENSJJAG00000015513	Lsg1	98	82.399	Jaculus_jaculus
MGP_PahariEiJ_G0016352	Lsg1	98	65.409	ENSKMAG00000009681	lsg1	98	63.950	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016352	Lsg1	98	63.780	ENSLBEG00000024261	lsg1	98	63.438	Labrus_bergylta
MGP_PahariEiJ_G0016352	Lsg1	100	65.327	ENSLACG00000013399	LSG1	99	66.769	Latimeria_chalumnae
MGP_PahariEiJ_G0016352	Lsg1	98	65.356	ENSLOCG00000004918	lsg1	98	66.204	Lepisosteus_oculatus
MGP_PahariEiJ_G0016352	Lsg1	100	81.385	ENSLAFG00000012919	-	98	81.847	Loxodonta_africana
MGP_PahariEiJ_G0016352	Lsg1	100	82.727	ENSMFAG00000039903	LSG1	98	81.173	Macaca_fascicularis
MGP_PahariEiJ_G0016352	Lsg1	100	82.879	ENSMMUG00000010708	LSG1	98	82.716	Macaca_mulatta
MGP_PahariEiJ_G0016352	Lsg1	100	82.879	ENSMNEG00000031538	LSG1	98	81.327	Macaca_nemestrina
MGP_PahariEiJ_G0016352	Lsg1	100	82.549	ENSMLEG00000041184	LSG1	98	82.562	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016352	Lsg1	100	63.872	ENSMAMG00000000470	lsg1	99	63.509	Mastacembelus_armatus
MGP_PahariEiJ_G0016352	Lsg1	100	64.079	ENSMZEG00005017865	lsg1	98	62.766	Maylandia_zebra
MGP_PahariEiJ_G0016352	Lsg1	88	67.973	ENSMGAG00000007050	LSG1	99	67.632	Meleagris_gallopavo
MGP_PahariEiJ_G0016352	Lsg1	96	84.102	ENSMAUG00000016976	Lsg1	95	84.117	Mesocricetus_auratus
MGP_PahariEiJ_G0016352	Lsg1	100	81.279	ENSMICG00000049087	LSG1	98	81.579	Microcebus_murinus
MGP_PahariEiJ_G0016352	Lsg1	100	86.565	ENSMOCG00000022136	Lsg1	98	85.913	Microtus_ochrogaster
MGP_PahariEiJ_G0016352	Lsg1	84	73.333	ENSMMOG00000008884	lsg1	97	72.177	Mola_mola
MGP_PahariEiJ_G0016352	Lsg1	99	60.698	ENSMODG00000019828	LSG1	98	60.000	Monodelphis_domestica
MGP_PahariEiJ_G0016352	Lsg1	100	94.299	MGP_CAROLIEiJ_G0020648	Lsg1	98	94.984	Mus_caroli
MGP_PahariEiJ_G0016352	Lsg1	100	94.915	ENSMUSG00000022538	Lsg1	98	95.455	Mus_musculus
MGP_PahariEiJ_G0016352	Lsg1	100	95.532	MGP_SPRETEiJ_G0021544	Lsg1	100	95.532	Mus_spretus
MGP_PahariEiJ_G0016352	Lsg1	100	79.697	ENSMPUG00000003734	LSG1	98	79.969	Mustela_putorius_furo
MGP_PahariEiJ_G0016352	Lsg1	100	82.569	ENSMLUG00000012548	LSG1	98	82.893	Myotis_lucifugus
MGP_PahariEiJ_G0016352	Lsg1	100	84.356	ENSNGAG00000021872	Lsg1	98	84.399	Nannospalax_galili
MGP_PahariEiJ_G0016352	Lsg1	100	83.030	ENSNLEG00000008293	LSG1	98	82.407	Nomascus_leucogenys
MGP_PahariEiJ_G0016352	Lsg1	70	72.165	ENSMEUG00000009041	-	82	72.165	Notamacropus_eugenii
MGP_PahariEiJ_G0016352	Lsg1	100	63.348	ENSONIG00000002635	lsg1	98	63.538	Oreochromis_niloticus
MGP_PahariEiJ_G0016352	Lsg1	95	73.065	ENSOANG00000012742	LSG1	99	72.419	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016352	Lsg1	100	82.727	ENSOCUG00000004817	LSG1	98	82.695	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016352	Lsg1	98	64.151	ENSORLG00000007695	lsg1	98	64.050	Oryzias_latipes
MGP_PahariEiJ_G0016352	Lsg1	98	63.994	ENSORLG00020016286	lsg1	98	63.183	Oryzias_latipes_hni
MGP_PahariEiJ_G0016352	Lsg1	98	64.409	ENSORLG00015012025	lsg1	98	64.207	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016352	Lsg1	98	63.836	ENSOMEG00000022379	lsg1	98	63.793	Oryzias_melastigma
MGP_PahariEiJ_G0016352	Lsg1	100	80.422	ENSOGAG00000003475	LSG1	98	80.215	Otolemur_garnettii
MGP_PahariEiJ_G0016352	Lsg1	100	81.069	ENSOARG00000020403	LSG1	98	79.814	Ovis_aries
MGP_PahariEiJ_G0016352	Lsg1	100	81.639	ENSPPAG00000029271	LSG1	98	81.636	Pan_paniscus
MGP_PahariEiJ_G0016352	Lsg1	100	80.660	ENSPPRG00000010281	LSG1	98	80.793	Panthera_pardus
MGP_PahariEiJ_G0016352	Lsg1	100	81.667	ENSPTIG00000010789	LSG1	98	81.818	Panthera_tigris_altaica
MGP_PahariEiJ_G0016352	Lsg1	100	81.487	ENSPTRG00000015760	LSG1	98	81.481	Pan_troglodytes
MGP_PahariEiJ_G0016352	Lsg1	100	83.030	ENSPANG00000018249	LSG1	98	81.481	Papio_anubis
MGP_PahariEiJ_G0016352	Lsg1	100	63.804	ENSPKIG00000002895	lsg1	98	63.467	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016352	Lsg1	96	66.304	ENSPSIG00000009821	LSG1	100	66.509	Pelodiscus_sinensis
MGP_PahariEiJ_G0016352	Lsg1	95	65.590	ENSPMGG00000000931	lsg1	100	65.000	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016352	Lsg1	100	86.718	ENSPEMG00000012082	-	98	86.335	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016352	Lsg1	99	59.791	ENSPMAG00000007451	lsg1	99	59.607	Petromyzon_marinus
MGP_PahariEiJ_G0016352	Lsg1	100	67.358	ENSPCIG00000013890	LSG1	80	67.358	Phascolarctos_cinereus
MGP_PahariEiJ_G0016352	Lsg1	97	66.877	ENSPFOG00000021882	lsg1	98	67.136	Poecilia_formosa
MGP_PahariEiJ_G0016352	Lsg1	97	65.931	ENSPLAG00000019536	lsg1	98	66.197	Poecilia_latipinna
MGP_PahariEiJ_G0016352	Lsg1	97	66.195	ENSPMEG00000017281	lsg1	98	66.459	Poecilia_mexicana
MGP_PahariEiJ_G0016352	Lsg1	97	56.000	ENSPREG00000006048	lsg1	98	55.878	Poecilia_reticulata
MGP_PahariEiJ_G0016352	Lsg1	92	80.757	ENSPPYG00000014425	LSG1	98	79.866	Pongo_abelii
MGP_PahariEiJ_G0016352	Lsg1	90	84.211	ENSPCAG00000005511	LSG1	88	89.231	Procavia_capensis
MGP_PahariEiJ_G0016352	Lsg1	100	81.364	ENSPCOG00000012360	LSG1	98	81.202	Propithecus_coquereli
MGP_PahariEiJ_G0016352	Lsg1	100	63.885	ENSPNYG00000021994	lsg1	98	64.286	Pundamilia_nyererei
MGP_PahariEiJ_G0016352	Lsg1	100	65.204	ENSPNAG00000015533	lsg1	99	64.915	Pygocentrus_nattereri
MGP_PahariEiJ_G0016352	Lsg1	100	91.020	ENSRNOG00000001727	Lsg1	98	90.712	Rattus_norvegicus
MGP_PahariEiJ_G0016352	Lsg1	100	81.515	ENSRBIG00000029053	LSG1	98	81.453	Rhinopithecus_bieti
MGP_PahariEiJ_G0016352	Lsg1	100	81.515	ENSRROG00000037702	LSG1	98	81.453	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016352	Lsg1	66	58.084	YGL099W	LSG1	68	58.084	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0016352	Lsg1	100	83.156	ENSSBOG00000034938	LSG1	98	83.333	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016352	Lsg1	78	67.366	ENSSHAG00000003487	LSG1	100	67.108	Sarcophilus_harrisii
MGP_PahariEiJ_G0016352	Lsg1	98	64.688	ENSSFOG00015008955	lsg1	98	64.743	Scleropages_formosus
MGP_PahariEiJ_G0016352	Lsg1	98	65.116	ENSSDUG00000004622	lsg1	98	64.715	Seriola_dumerili
MGP_PahariEiJ_G0016352	Lsg1	98	65.566	ENSSLDG00000010869	lsg1	98	65.367	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016352	Lsg1	82	79.532	ENSSARG00000012981	LSG1	80	77.713	Sorex_araneus
MGP_PahariEiJ_G0016352	Lsg1	100	68.872	ENSSPUG00000016347	LSG1	98	68.043	Sphenodon_punctatus
MGP_PahariEiJ_G0016352	Lsg1	100	63.344	ENSSPAG00000005508	lsg1	99	64.062	Stegastes_partitus
MGP_PahariEiJ_G0016352	Lsg1	100	81.413	ENSSSCG00000011827	LSG1	98	80.560	Sus_scrofa
MGP_PahariEiJ_G0016352	Lsg1	89	65.436	ENSTGUG00000009068	LSG1	100	65.268	Taeniopygia_guttata
MGP_PahariEiJ_G0016352	Lsg1	97	61.417	ENSTRUG00000017380	lsg1	98	61.562	Takifugu_rubripes
MGP_PahariEiJ_G0016352	Lsg1	97	64.945	ENSTNIG00000015570	lsg1	98	64.587	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016352	Lsg1	100	74.656	ENSTTRG00000000559	LSG1	98	73.602	Tursiops_truncatus
MGP_PahariEiJ_G0016352	Lsg1	100	80.606	ENSUAMG00000012454	LSG1	98	80.586	Ursus_americanus
MGP_PahariEiJ_G0016352	Lsg1	100	80.606	ENSUMAG00000000855	LSG1	98	80.586	Ursus_maritimus
MGP_PahariEiJ_G0016352	Lsg1	95	76.198	ENSVPAG00000012400	LSG1	100	75.879	Vicugna_pacos
MGP_PahariEiJ_G0016352	Lsg1	95	79.073	ENSVVUG00000008956	LSG1	97	79.073	Vulpes_vulpes
MGP_PahariEiJ_G0016352	Lsg1	100	65.408	ENSXETG00000003451	lsg1	99	66.000	Xenopus_tropicalis
MGP_PahariEiJ_G0016352	Lsg1	97	65.409	ENSXCOG00000003239	lsg1	98	64.396	Xiphophorus_couchianus
MGP_PahariEiJ_G0016352	Lsg1	97	64.472	ENSXMAG00000005536	lsg1	98	64.091	Xiphophorus_maculatus