EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016426 (Gene tree)
Gene ID: 110329509
Gene Symbol: Polq
Alias: A430110D14Rik
Full Name: DNA polymerase theta
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 88025 bases
Position: chr12:32007809-32095833
Accession: 110329509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0028903	DEAD	PF00270.29	2e-16	1	1
MGP_PahariEiJ_P0028906	DEAD	PF00270.29	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0028908	-	2977	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028909	-	2174	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028903	-	8593	XM_021209138	MGP_PahariEiJ_P0028903	2555 (aa)	XP_021064797	UPI000A307101
MGP_PahariEiJ_T0028906	-	7323	XM_021209139	MGP_PahariEiJ_P0028906	2276 (aa)	XP_021064798	UPI000A313068
MGP_PahariEiJ_T0028907	-	967	-	-	- (aa)	-	-
MGP_PahariEiJ_T0028904	-	7414	-	MGP_PahariEiJ_P0028904	175 (aa)	-	-
MGP_PahariEiJ_T0028905	-	8663	-	MGP_PahariEiJ_P0028905	175 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0016426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016426	Polq	100	80.930	ENSG00000051341	POLQ	99	72.501	Homo_sapiens
MGP_PahariEiJ_G0016426	Polq	65	66.627	ENSAPOG00000008650	polq	60	66.946	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016426	Polq	100	79.630	ENSAMEG00000014870	POLQ	98	71.773	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016426	Polq	63	68.421	ENSAOCG00000005817	polq	73	66.627	Amphiprion_ocellaris
MGP_PahariEiJ_G0016426	Polq	63	68.421	ENSAPEG00000020432	polq	74	66.392	Amphiprion_percula
MGP_PahariEiJ_G0016426	Polq	97	80.645	ENSAPLG00000014869	POLQ	89	82.781	Anas_platyrhynchos
MGP_PahariEiJ_G0016426	Polq	84	68.601	ENSACAG00000011574	POLQ	90	69.116	Anolis_carolinensis
MGP_PahariEiJ_G0016426	Polq	97	77.027	ENSANAG00000024407	POLQ	90	77.027	Aotus_nancymaae
MGP_PahariEiJ_G0016426	Polq	64	66.469	ENSACLG00000013865	polq	57	66.469	Astatotilapia_calliptera
MGP_PahariEiJ_G0016426	Polq	73	65.635	ENSAMXG00000004839	polq	64	66.897	Astyanax_mexicanus
MGP_PahariEiJ_G0016426	Polq	98	88.050	ENSBTAG00000001920	POLQ	99	81.818	Bos_taurus
MGP_PahariEiJ_G0016426	Polq	53	33.068	WBGene00020964	polq-1	71	33.777	Caenorhabditis_elegans
MGP_PahariEiJ_G0016426	Polq	100	79.186	ENSCJAG00000008508	POLQ	99	71.412	Callithrix_jacchus
MGP_PahariEiJ_G0016426	Polq	67	89.516	ENSCAFG00000011479	POLQ	85	89.516	Canis_familiaris
MGP_PahariEiJ_G0016426	Polq	100	79.535	ENSCAFG00020005928	POLQ	88	83.240	Canis_lupus_dingo
MGP_PahariEiJ_G0016426	Polq	100	78.605	ENSCHIG00000013841	POLQ	88	82.796	Capra_hircus
MGP_PahariEiJ_G0016426	Polq	90	77.848	ENSTSYG00000009550	POLQ	84	82.353	Carlito_syrichta
MGP_PahariEiJ_G0016426	Polq	91	85.263	ENSCCAG00000026574	POLQ	99	89.062	Cebus_capucinus
MGP_PahariEiJ_G0016426	Polq	100	79.909	ENSCATG00000014007	POLQ	94	72.028	Cercocebus_atys
MGP_PahariEiJ_G0016426	Polq	100	80.465	ENSCLAG00000008388	POLQ	91	82.258	Chinchilla_lanigera
MGP_PahariEiJ_G0016426	Polq	100	79.638	ENSCSAG00000007239	POLQ	85	80.729	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016426	Polq	90	81.013	ENSCHOG00000005999	POLQ	76	91.803	Choloepus_hoffmanni
MGP_PahariEiJ_G0016426	Polq	97	80.645	ENSCPBG00000001827	POLQ	89	80.645	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016426	Polq	51	56.180	ENSCSAVG00000007277	-	100	46.433	Ciona_savignyi
MGP_PahariEiJ_G0016426	Polq	98	82.967	ENSCANG00000032946	POLQ	98	72.123	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016426	Polq	100	87.383	ENSCGRG00001013184	Polq	99	87.166	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016426	Polq	100	87.383	ENSCGRG00000001328	Polq	99	87.166	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016426	Polq	64	64.628	ENSCSEG00000005068	polq	62	58.214	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016426	Polq	60	69.281	ENSCVAG00000019651	polq	76	65.119	Cyprinodon_variegatus
MGP_PahariEiJ_G0016426	Polq	69	65.079	ENSDARG00000044622	polq	63	66.819	Danio_rerio
MGP_PahariEiJ_G0016426	Polq	100	70.173	ENSDNOG00000009810	POLQ	99	70.198	Dasypus_novemcinctus
MGP_PahariEiJ_G0016426	Polq	100	81.395	ENSDORG00000002416	Polq	99	83.957	Dipodomys_ordii
MGP_PahariEiJ_G0016426	Polq	61	49.068	FBgn0002905	mus308	71	44.844	Drosophila_melanogaster
MGP_PahariEiJ_G0016426	Polq	95	79.618	ENSETEG00000002958	POLQ	95	79.618	Echinops_telfairi
MGP_PahariEiJ_G0016426	Polq	61	55.862	ENSEBUG00000007484	POLQ	53	55.862	Eptatretus_burgeri
MGP_PahariEiJ_G0016426	Polq	96	87.632	ENSEASG00005014326	POLQ	95	88.646	Equus_asinus_asinus
MGP_PahariEiJ_G0016426	Polq	100	78.924	ENSECAG00000014314	POLQ	99	72.231	Equus_caballus
MGP_PahariEiJ_G0016426	Polq	83	91.803	ENSEEUG00000001047	POLQ	81	91.803	Erinaceus_europaeus
MGP_PahariEiJ_G0016426	Polq	54	70.543	ENSELUG00000018460	polq	84	69.366	Esox_lucius
MGP_PahariEiJ_G0016426	Polq	100	80.734	ENSFCAG00000023397	POLQ	89	81.481	Felis_catus
MGP_PahariEiJ_G0016426	Polq	82	85.000	ENSFALG00000005269	POLQ	86	75.031	Ficedula_albicollis
MGP_PahariEiJ_G0016426	Polq	100	81.991	ENSFDAG00000013705	POLQ	89	84.153	Fukomys_damarensis
MGP_PahariEiJ_G0016426	Polq	67	62.712	ENSFHEG00000009685	polq	60	64.162	Fundulus_heteroclitus
MGP_PahariEiJ_G0016426	Polq	76	67.089	ENSGMOG00000003509	polq	85	63.287	Gadus_morhua
MGP_PahariEiJ_G0016426	Polq	80	72.727	ENSGALG00000014924	POLQ	79	73.288	Gallus_gallus
MGP_PahariEiJ_G0016426	Polq	67	63.559	ENSGAFG00000004642	polq	60	62.457	Gambusia_affinis
MGP_PahariEiJ_G0016426	Polq	58	70.068	ENSGACG00000016100	polq	91	67.064	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016426	Polq	88	77.778	ENSGAGG00000013573	POLQ	87	77.778	Gopherus_agassizii
MGP_PahariEiJ_G0016426	Polq	91	84.670	ENSGGOG00000011565	POLQ	93	85.823	Gorilla_gorilla
MGP_PahariEiJ_G0016426	Polq	64	66.587	ENSHBUG00000002672	polq	75	66.587	Haplochromis_burtoni
MGP_PahariEiJ_G0016426	Polq	93	85.168	ENSHGLG00000012935	POLQ	99	78.947	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016426	Polq	100	79.070	ENSHGLG00100013873	POLQ	89	81.283	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016426	Polq	69	64.800	ENSIPUG00000001045	polq	67	66.170	Ictalurus_punctatus
MGP_PahariEiJ_G0016426	Polq	100	81.776	ENSSTOG00000009954	POLQ	89	85.484	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016426	Polq	64	66.667	ENSKMAG00000000050	polq	73	66.667	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016426	Polq	53	76.087	ENSLBEG00000003287	-	59	76.087	Labrus_bergylta
MGP_PahariEiJ_G0016426	Polq	53	76.087	ENSLBEG00000011610	-	59	76.087	Labrus_bergylta
MGP_PahariEiJ_G0016426	Polq	83	68.946	ENSLOCG00000005709	polq	80	68.946	Lepisosteus_oculatus
MGP_PahariEiJ_G0016426	Polq	83	85.955	ENSLAFG00000011574	POLQ	88	83.871	Loxodonta_africana
MGP_PahariEiJ_G0016426	Polq	100	80.090	ENSMFAG00000001627	POLQ	99	72.516	Macaca_fascicularis
MGP_PahariEiJ_G0016426	Polq	100	80.090	ENSMMUG00000007973	POLQ	99	72.544	Macaca_mulatta
MGP_PahariEiJ_G0016426	Polq	100	80.543	ENSMNEG00000035186	POLQ	88	82.292	Macaca_nemestrina
MGP_PahariEiJ_G0016426	Polq	91	82.398	ENSMLEG00000032728	POLQ	92	79.225	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016426	Polq	64	66.945	ENSMAMG00000000877	polq	57	66.945	Mastacembelus_armatus
MGP_PahariEiJ_G0016426	Polq	65	64.692	ENSMZEG00005021576	polq	74	64.692	Maylandia_zebra
MGP_PahariEiJ_G0016426	Polq	56	85.714	ENSMGAG00000014264	POLQ	83	72.512	Meleagris_gallopavo
MGP_PahariEiJ_G0016426	Polq	90	89.172	ENSMAUG00000015080	-	84	85.401	Mesocricetus_auratus
MGP_PahariEiJ_G0016426	Polq	100	79.638	ENSMICG00000049493	POLQ	88	83.696	Microcebus_murinus
MGP_PahariEiJ_G0016426	Polq	100	85.981	ENSMOCG00000016969	Polq	99	85.638	Microtus_ochrogaster
MGP_PahariEiJ_G0016426	Polq	65	65.955	ENSMMOG00000007373	polq	73	65.955	Mola_mola
MGP_PahariEiJ_G0016426	Polq	98	81.481	ENSMODG00000018252	POLQ	89	81.481	Monodelphis_domestica
MGP_PahariEiJ_G0016426	Polq	66	68.421	ENSMALG00000007491	polq	61	59.018	Monopterus_albus
MGP_PahariEiJ_G0016426	Polq	100	94.523	MGP_CAROLIEiJ_G0020725	Polq	99	94.545	Mus_caroli
MGP_PahariEiJ_G0016426	Polq	99	93.578	ENSMUSG00000034206	Polq	99	93.676	Mus_musculus
MGP_PahariEiJ_G0016426	Polq	100	94.210	MGP_SPRETEiJ_G0021625	Polq	100	94.210	Mus_spretus
MGP_PahariEiJ_G0016426	Polq	96	88.710	ENSMPUG00000004980	POLQ	90	88.710	Mustela_putorius_furo
MGP_PahariEiJ_G0016426	Polq	95	91.753	ENSMLUG00000007687	POLQ	90	91.753	Myotis_lucifugus
MGP_PahariEiJ_G0016426	Polq	100	86.449	ENSNGAG00000024216	Polq	99	87.166	Nannospalax_galili
MGP_PahariEiJ_G0016426	Polq	54	74.737	ENSNBRG00000016646	-	65	74.737	Neolamprologus_brichardi
MGP_PahariEiJ_G0016426	Polq	95	84.211	ENSNLEG00000005179	POLQ	90	84.211	Nomascus_leucogenys
MGP_PahariEiJ_G0016426	Polq	75	77.273	ENSMEUG00000005314	-	68	80.734	Notamacropus_eugenii
MGP_PahariEiJ_G0016426	Polq	82	90.984	ENSOPRG00000006048	POLQ	79	90.984	Ochotona_princeps
MGP_PahariEiJ_G0016426	Polq	94	85.821	ENSODEG00000007851	POLQ	95	85.821	Octodon_degus
MGP_PahariEiJ_G0016426	Polq	70	66.746	ENSONIG00000008937	polq	85	66.746	Oreochromis_niloticus
MGP_PahariEiJ_G0016426	Polq	60	77.419	ENSOANG00000004437	-	81	76.269	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016426	Polq	100	77.626	ENSOCUG00000008077	POLQ	99	70.691	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016426	Polq	58	74.194	ENSORLG00015004392	polq	67	66.914	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016426	Polq	64	66.308	ENSOMEG00000012947	polq	60	66.308	Oryzias_melastigma
MGP_PahariEiJ_G0016426	Polq	100	79.817	ENSOGAG00000015795	POLQ	89	81.579	Otolemur_garnettii
MGP_PahariEiJ_G0016426	Polq	100	78.378	ENSOARG00000020009	POLQ	85	81.865	Ovis_aries
MGP_PahariEiJ_G0016426	Polq	100	80.090	ENSPPAG00000027313	POLQ	99	72.565	Pan_paniscus
MGP_PahariEiJ_G0016426	Polq	100	82.326	ENSPPRG00000007014	POLQ	89	83.333	Panthera_pardus
MGP_PahariEiJ_G0016426	Polq	100	80.734	ENSPTIG00000017074	POLQ	89	81.481	Panthera_tigris_altaica
MGP_PahariEiJ_G0016426	Polq	100	80.090	ENSPTRG00000015276	POLQ	99	72.565	Pan_troglodytes
MGP_PahariEiJ_G0016426	Polq	100	79.909	ENSPANG00000000759	POLQ	94	72.416	Papio_anubis
MGP_PahariEiJ_G0016426	Polq	70	67.742	ENSPKIG00000015375	polq	70	65.336	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016426	Polq	69	77.778	ENSPSIG00000013657	POLQ	90	76.087	Pelodiscus_sinensis
MGP_PahariEiJ_G0016426	Polq	63	66.364	ENSPMGG00000024163	-	64	66.364	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016426	Polq	100	87.383	ENSPEMG00000017429	Polq	99	80.220	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016426	Polq	67	63.559	ENSPFOG00000019624	polq	64	64.460	Poecilia_formosa
MGP_PahariEiJ_G0016426	Polq	67	62.712	ENSPLAG00000022900	polq	54	64.228	Poecilia_latipinna
MGP_PahariEiJ_G0016426	Polq	65	64.460	ENSPREG00000006445	polq	60	64.460	Poecilia_reticulata
MGP_PahariEiJ_G0016426	Polq	100	81.860	ENSPPYG00000013498	POLQ	88	83.871	Pongo_abelii
MGP_PahariEiJ_G0016426	Polq	91	85.512	ENSPCOG00000024680	POLQ	99	85.512	Propithecus_coquereli
MGP_PahariEiJ_G0016426	Polq	98	78.095	ENSPVAG00000003165	POLQ	82	82.873	Pteropus_vampyrus
MGP_PahariEiJ_G0016426	Polq	82	69.663	ENSPNAG00000003089	polq	76	67.775	Pygocentrus_nattereri
MGP_PahariEiJ_G0016426	Polq	99	91.444	ENSRNOG00000002471	Polq	99	87.564	Rattus_norvegicus
MGP_PahariEiJ_G0016426	Polq	97	85.176	ENSRBIG00000023391	POLQ	99	86.616	Rhinopithecus_bieti
MGP_PahariEiJ_G0016426	Polq	100	80.090	ENSRROG00000045280	POLQ	99	72.244	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016426	Polq	97	83.226	ENSSHAG00000006984	POLQ	89	83.226	Sarcophilus_harrisii
MGP_PahariEiJ_G0016426	Polq	90	59.259	ENSSFOG00015013674	polq	68	67.723	Scleropages_formosus
MGP_PahariEiJ_G0016426	Polq	64	65.950	ENSSMAG00000011427	polq	58	65.950	Scophthalmus_maximus
MGP_PahariEiJ_G0016426	Polq	64	66.308	ENSSDUG00000022307	polq	74	66.308	Seriola_dumerili
MGP_PahariEiJ_G0016426	Polq	64	66.587	ENSSLDG00000024994	polq	74	66.587	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016426	Polq	91	88.750	ENSSARG00000001970	POLQ	90	90.678	Sorex_araneus
MGP_PahariEiJ_G0016426	Polq	98	81.481	ENSSPUG00000004529	POLQ	89	81.481	Sphenodon_punctatus
MGP_PahariEiJ_G0016426	Polq	65	66.547	ENSSPAG00000021010	polq	73	66.547	Stegastes_partitus
MGP_PahariEiJ_G0016426	Polq	100	77.376	ENSSSCG00000036613	POLQ	99	70.959	Sus_scrofa
MGP_PahariEiJ_G0016426	Polq	57	83.838	ENSTGUG00000015582	-	100	83.838	Taeniopygia_guttata
MGP_PahariEiJ_G0016426	Polq	90	80.263	ENSTGUG00000013371	-	89	71.038	Taeniopygia_guttata
MGP_PahariEiJ_G0016426	Polq	53	76.087	ENSTRUG00000023027	-	81	76.087	Takifugu_rubripes
MGP_PahariEiJ_G0016426	Polq	53	75.000	ENSTNIG00000017816	-	99	66.369	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016426	Polq	80	89.000	ENSTTRG00000001348	POLQ	69	89.000	Tursiops_truncatus
MGP_PahariEiJ_G0016426	Polq	90	80.380	ENSUAMG00000012910	-	78	81.203	Ursus_americanus
MGP_PahariEiJ_G0016426	Polq	90	80.380	ENSUAMG00000009373	-	81	81.818	Ursus_americanus
MGP_PahariEiJ_G0016426	Polq	100	74.222	ENSUMAG00000025251	POLQ	88	81.720	Ursus_maritimus
MGP_PahariEiJ_G0016426	Polq	95	88.793	ENSVVUG00000022390	POLQ	99	88.338	Vulpes_vulpes
MGP_PahariEiJ_G0016426	Polq	83	71.950	ENSXETG00000009913	polq	83	71.888	Xenopus_tropicalis
MGP_PahariEiJ_G0016426	Polq	61	63.793	ENSXCOG00000013713	-	64	63.793	Xiphophorus_couchianus
MGP_PahariEiJ_G0016426	Polq	67	63.559	ENSXMAG00000012597	polq	61	64.460	Xiphophorus_maculatus