EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016512 (Gene tree)
Gene ID: 110329898
Gene Symbol: Trmt10c
Alias: 1300018J16Rik|D16Ertd454e|Rg9mtd1
Full Name: tRNA methyltransferase 10C%2C mitochondrial RNase P subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 5095 bases
Position: chr12:49706234-49711328
Accession: 110329898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0029241	tRNA_m1G_MT	PF01746.21	4.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0029241	-	3384	-	MGP_PahariEiJ_P0029241	412 (aa)	XP_021065495	UPI000A311C37

Gene Model

Click here to download MGP_PahariEiJ_G0016512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016512	Trmt10c	96	76.692	ENSG00000174173	TRMT10C	99	76.692	Homo_sapiens
MGP_PahariEiJ_G0016512	Trmt10c	57	55.833	ENSAPOG00000003883	trmt10c	67	56.710	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016512	Trmt10c	98	75.248	ENSAMEG00000019657	TRMT10C	98	75.248	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0016512	Trmt10c	63	50.575	ENSACIG00000022244	trmt10c	58	61.538	Amphilophus_citrinellus
MGP_PahariEiJ_G0016512	Trmt10c	50	61.650	ENSAOCG00000005855	trmt10c	60	61.650	Amphiprion_ocellaris
MGP_PahariEiJ_G0016512	Trmt10c	61	31.783	ENSAOCG00000001205	trmt10b	76	31.799	Amphiprion_ocellaris
MGP_PahariEiJ_G0016512	Trmt10c	65	31.095	ENSAPEG00000003675	trmt10b	67	33.796	Amphiprion_percula
MGP_PahariEiJ_G0016512	Trmt10c	50	62.136	ENSAPEG00000021992	trmt10c	60	62.136	Amphiprion_percula
MGP_PahariEiJ_G0016512	Trmt10c	89	48.800	ENSATEG00000012576	trmt10c	81	54.426	Anabas_testudineus
MGP_PahariEiJ_G0016512	Trmt10c	81	54.464	ENSAPLG00000011561	TRMT10C	84	53.846	Anas_platyrhynchos
MGP_PahariEiJ_G0016512	Trmt10c	91	50.390	ENSACAG00000011903	TRMT10C	87	50.390	Anolis_carolinensis
MGP_PahariEiJ_G0016512	Trmt10c	97	44.903	ENSACLG00000024269	trmt10c	97	45.631	Astatotilapia_calliptera
MGP_PahariEiJ_G0016512	Trmt10c	83	49.858	ENSAMXG00000014749	trmt10c	83	49.003	Astyanax_mexicanus
MGP_PahariEiJ_G0016512	Trmt10c	99	74.817	ENSBTAG00000024027	TRMT10C	97	74.817	Bos_taurus
MGP_PahariEiJ_G0016512	Trmt10c	99	70.905	ENSCAFG00000031607	TRMT10C	97	70.905	Canis_familiaris
MGP_PahariEiJ_G0016512	Trmt10c	99	70.905	ENSCAFG00020008862	TRMT10C	97	70.905	Canis_lupus_dingo
MGP_PahariEiJ_G0016512	Trmt10c	99	74.817	ENSCHIG00000021446	TRMT10C	96	74.817	Capra_hircus
MGP_PahariEiJ_G0016512	Trmt10c	99	73.123	ENSCLAG00000017738	TRMT10C	98	73.123	Chinchilla_lanigera
MGP_PahariEiJ_G0016512	Trmt10c	96	78.195	ENSCSAG00000018722	TRMT10C	99	78.195	Chlorocebus_sabaeus
MGP_PahariEiJ_G0016512	Trmt10c	92	74.607	ENSCHOG00000010108	TRMT10C	98	75.654	Choloepus_hoffmanni
MGP_PahariEiJ_G0016512	Trmt10c	100	78.744	ENSCGRG00001006603	Trmt10c	100	78.744	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016512	Trmt10c	100	78.744	ENSCGRG00000019728	Trmt10c	100	78.744	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016512	Trmt10c	92	44.417	ENSCSEG00000006163	trmt10c	81	45.185	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016512	Trmt10c	61	31.907	ENSCVAG00000014204	trmt10b	76	32.016	Cyprinodon_variegatus
MGP_PahariEiJ_G0016512	Trmt10c	87	47.704	ENSCVAG00000013751	trmt10c	77	46.530	Cyprinodon_variegatus
MGP_PahariEiJ_G0016512	Trmt10c	82	49.425	ENSDARG00000041575	trmt10c	78	57.021	Danio_rerio
MGP_PahariEiJ_G0016512	Trmt10c	100	71.981	ENSDNOG00000012650	TRMT10C	99	71.981	Dasypus_novemcinctus
MGP_PahariEiJ_G0016512	Trmt10c	99	73.529	ENSDORG00000027529	Trmt10c	100	72.881	Dipodomys_ordii
MGP_PahariEiJ_G0016512	Trmt10c	74	36.449	FBgn0034351	rswl	71	35.202	Drosophila_melanogaster
MGP_PahariEiJ_G0016512	Trmt10c	77	35.331	ENSEBUG00000015332	trmt10c	75	34.385	Eptatretus_burgeri
MGP_PahariEiJ_G0016512	Trmt10c	100	78.313	ENSEASG00005011186	TRMT10C	99	78.313	Equus_asinus_asinus
MGP_PahariEiJ_G0016512	Trmt10c	100	78.554	ENSECAG00000001533	TRMT10C	99	78.554	Equus_caballus
MGP_PahariEiJ_G0016512	Trmt10c	96	71.250	ENSEEUG00000004696	TRMT10C	99	71.250	Erinaceus_europaeus
MGP_PahariEiJ_G0016512	Trmt10c	85	50.138	ENSELUG00000002553	trmt10c	80	53.079	Esox_lucius
MGP_PahariEiJ_G0016512	Trmt10c	98	75.245	ENSFCAG00000003430	TRMT10C	96	75.245	Felis_catus
MGP_PahariEiJ_G0016512	Trmt10c	87	53.889	ENSFALG00000014236	TRMT10C	85	52.329	Ficedula_albicollis
MGP_PahariEiJ_G0016512	Trmt10c	99	72.816	ENSFDAG00000001576	TRMT10C	96	72.816	Fukomys_damarensis
MGP_PahariEiJ_G0016512	Trmt10c	82	49.587	ENSFHEG00000015379	trmt10c	72	49.587	Fundulus_heteroclitus
MGP_PahariEiJ_G0016512	Trmt10c	80	49.850	ENSGMOG00000008573	trmt10c	97	49.850	Gadus_morhua
MGP_PahariEiJ_G0016512	Trmt10c	86	52.877	ENSGALG00000015328	TRMT10C	87	50.949	Gallus_gallus
MGP_PahariEiJ_G0016512	Trmt10c	52	60.930	ENSGAFG00000012256	trmt10c	69	60.930	Gambusia_affinis
MGP_PahariEiJ_G0016512	Trmt10c	61	30.888	ENSGAFG00000002611	trmt10b	67	33.168	Gambusia_affinis
MGP_PahariEiJ_G0016512	Trmt10c	92	48.454	ENSGACG00000015281	trmt10c	95	48.196	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016512	Trmt10c	84	56.034	ENSGAGG00000022825	TRMT10C	94	52.736	Gopherus_agassizii
MGP_PahariEiJ_G0016512	Trmt10c	96	75.940	ENSGGOG00000006484	TRMT10C	99	75.940	Gorilla_gorilla
MGP_PahariEiJ_G0016512	Trmt10c	52	56.279	ENSHBUG00000000010	trmt10c	72	53.390	Haplochromis_burtoni
MGP_PahariEiJ_G0016512	Trmt10c	98	73.039	ENSHGLG00000019767	TRMT10C	98	74.020	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016512	Trmt10c	98	73.039	ENSHGLG00100020191	TRMT10C	98	74.020	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016512	Trmt10c	52	57.477	ENSHCOG00000003493	trmt10c	78	57.477	Hippocampus_comes
MGP_PahariEiJ_G0016512	Trmt10c	92	49.495	ENSIPUG00000010010	trmt10c	81	48.232	Ictalurus_punctatus
MGP_PahariEiJ_G0016512	Trmt10c	98	78.378	ENSSTOG00000012199	TRMT10C	97	78.378	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016512	Trmt10c	79	50.595	ENSKMAG00000022027	trmt10c	78	49.852	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016512	Trmt10c	78	50.147	ENSLBEG00000013143	trmt10c	69	50.147	Labrus_bergylta
MGP_PahariEiJ_G0016512	Trmt10c	84	51.955	ENSLACG00000002036	TRMT10C	92	54.261	Latimeria_chalumnae
MGP_PahariEiJ_G0016512	Trmt10c	88	50.398	ENSLOCG00000017802	trmt10c	85	50.398	Lepisosteus_oculatus
MGP_PahariEiJ_G0016512	Trmt10c	100	75.000	ENSLAFG00000009677	TRMT10C	100	75.000	Loxodonta_africana
MGP_PahariEiJ_G0016512	Trmt10c	99	77.561	ENSMMUG00000017780	TRMT10C	97	77.561	Macaca_mulatta
MGP_PahariEiJ_G0016512	Trmt10c	54	55.856	ENSMAMG00000003124	trmt10c	66	55.856	Mastacembelus_armatus
MGP_PahariEiJ_G0016512	Trmt10c	52	56.279	ENSMZEG00005000671	trmt10c	65	56.279	Maylandia_zebra
MGP_PahariEiJ_G0016512	Trmt10c	60	55.645	ENSMGAG00000014375	TRMT10C	89	57.642	Meleagris_gallopavo
MGP_PahariEiJ_G0016512	Trmt10c	100	81.356	ENSMAUG00000009904	Trmt10c	100	81.356	Mesocricetus_auratus
MGP_PahariEiJ_G0016512	Trmt10c	100	80.723	ENSMOCG00000020572	Trmt10c	100	80.723	Microtus_ochrogaster
MGP_PahariEiJ_G0016512	Trmt10c	59	52.675	ENSMMOG00000018106	trmt10c	59	60.606	Mola_mola
MGP_PahariEiJ_G0016512	Trmt10c	99	55.556	ENSMODG00000025175	TRMT10C	98	54.106	Monodelphis_domestica
MGP_PahariEiJ_G0016512	Trmt10c	86	47.105	ENSMALG00000016236	trmt10c	77	47.493	Monopterus_albus
MGP_PahariEiJ_G0016512	Trmt10c	100	94.686	MGP_CAROLIEiJ_G0020812	Trmt10c	100	94.686	Mus_caroli
MGP_PahariEiJ_G0016512	Trmt10c	100	94.686	ENSMUSG00000044763	Trmt10c	100	94.686	Mus_musculus
MGP_PahariEiJ_G0016512	Trmt10c	100	95.169	MGP_SPRETEiJ_G0021712	Trmt10c	100	95.169	Mus_spretus
MGP_PahariEiJ_G0016512	Trmt10c	98	75.676	ENSMPUG00000019979	TRMT10C	96	75.676	Mustela_putorius_furo
MGP_PahariEiJ_G0016512	Trmt10c	100	74.879	ENSMLUG00000028638	-	100	74.879	Myotis_lucifugus
MGP_PahariEiJ_G0016512	Trmt10c	99	74.453	ENSMLUG00000030097	-	98	74.453	Myotis_lucifugus
MGP_PahariEiJ_G0016512	Trmt10c	100	79.518	ENSNGAG00000022215	Trmt10c	100	79.518	Nannospalax_galili
MGP_PahariEiJ_G0016512	Trmt10c	50	58.173	ENSNBRG00000017903	trmt10c	79	58.173	Neolamprologus_brichardi
MGP_PahariEiJ_G0016512	Trmt10c	96	75.689	ENSOPRG00000007388	TRMT10C	99	75.689	Ochotona_princeps
MGP_PahariEiJ_G0016512	Trmt10c	80	48.991	ENSONIG00000003128	trmt10c	91	49.854	Oreochromis_niloticus
MGP_PahariEiJ_G0016512	Trmt10c	59	31.349	ENSONIG00000012990	TRMT10B	70	33.495	Oreochromis_niloticus
MGP_PahariEiJ_G0016512	Trmt10c	88	54.960	ENSOANG00000007508	TRMT10C	99	55.645	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016512	Trmt10c	61	30.233	ENSOANG00000000887	TRMT10B	57	31.053	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0016512	Trmt10c	99	74.817	ENSOCUG00000011103	TRMT10C	96	74.817	Oryctolagus_cuniculus
MGP_PahariEiJ_G0016512	Trmt10c	80	50.425	ENSORLG00000004992	trmt10c	71	49.860	Oryzias_latipes
MGP_PahariEiJ_G0016512	Trmt10c	82	48.404	ENSORLG00020016083	trmt10c	71	49.860	Oryzias_latipes_hni
MGP_PahariEiJ_G0016512	Trmt10c	80	50.142	ENSORLG00015014590	trmt10c	71	49.580	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016512	Trmt10c	51	59.624	ENSOMEG00000016820	trmt10c	77	59.624	Oryzias_melastigma
MGP_PahariEiJ_G0016512	Trmt10c	100	72.771	ENSOGAG00000001819	TRMT10C	100	72.771	Otolemur_garnettii
MGP_PahariEiJ_G0016512	Trmt10c	99	76.039	ENSOARG00000001677	TRMT10C	96	76.039	Ovis_aries
MGP_PahariEiJ_G0016512	Trmt10c	99	74.817	ENSPTIG00000002271	TRMT10C	97	74.817	Panthera_tigris_altaica
MGP_PahariEiJ_G0016512	Trmt10c	96	75.940	ENSPTRG00000015171	TRMT10C	99	75.940	Pan_troglodytes
MGP_PahariEiJ_G0016512	Trmt10c	96	75.940	ENSPTRG00000051763	-	99	75.940	Pan_troglodytes
MGP_PahariEiJ_G0016512	Trmt10c	94	47.880	ENSPKIG00000010307	trmt10c	84	47.132	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0016512	Trmt10c	82	58.651	ENSPSIG00000004052	TRMT10C	84	58.721	Pelodiscus_sinensis
MGP_PahariEiJ_G0016512	Trmt10c	51	56.808	ENSPMGG00000001599	trmt10c	74	56.808	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016512	Trmt10c	100	83.575	ENSPEMG00000006986	Trmt10c	100	83.575	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0016512	Trmt10c	99	55.635	ENSPCIG00000016080	TRMT10C	98	55.635	Phascolarctos_cinereus
MGP_PahariEiJ_G0016512	Trmt10c	61	30.859	ENSPFOG00000005390	trmt10b	70	31.081	Poecilia_formosa
MGP_PahariEiJ_G0016512	Trmt10c	92	48.111	ENSPFOG00000009282	trmt10c	97	47.487	Poecilia_formosa
MGP_PahariEiJ_G0016512	Trmt10c	63	50.769	ENSPLAG00000010774	trmt10c	77	58.140	Poecilia_latipinna
MGP_PahariEiJ_G0016512	Trmt10c	61	30.859	ENSPLAG00000004405	trmt10b	70	31.081	Poecilia_latipinna
MGP_PahariEiJ_G0016512	Trmt10c	61	30.859	ENSPMEG00000012573	trmt10b	70	31.081	Poecilia_mexicana
MGP_PahariEiJ_G0016512	Trmt10c	52	58.447	ENSPMEG00000023060	trmt10c	77	58.447	Poecilia_mexicana
MGP_PahariEiJ_G0016512	Trmt10c	93	46.890	ENSPREG00000021808	trmt10c	82	46.172	Poecilia_reticulata
MGP_PahariEiJ_G0016512	Trmt10c	99	75.854	ENSPPYG00000013592	TRMT10C	96	75.854	Pongo_abelii
MGP_PahariEiJ_G0016512	Trmt10c	96	75.188	ENSPCAG00000001290	TRMT10C	99	75.188	Procavia_capensis
MGP_PahariEiJ_G0016512	Trmt10c	96	75.628	ENSPVAG00000009885	TRMT10C	99	75.628	Pteropus_vampyrus
MGP_PahariEiJ_G0016512	Trmt10c	84	47.606	ENSPNYG00000003607	trmt10c	81	48.451	Pundamilia_nyererei
MGP_PahariEiJ_G0016512	Trmt10c	50	62.319	ENSPNAG00000010519	trmt10c	66	62.319	Pygocentrus_nattereri
MGP_PahariEiJ_G0016512	Trmt10c	100	87.681	ENSRNOG00000039567	Trmt10c	100	87.681	Rattus_norvegicus
MGP_PahariEiJ_G0016512	Trmt10c	93	76.104	ENSSBOG00000023326	TRMT10C	100	76.104	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016512	Trmt10c	99	54.436	ENSSHAG00000008854	TRMT10C	97	54.436	Sarcophilus_harrisii
MGP_PahariEiJ_G0016512	Trmt10c	83	50.000	ENSSFOG00015008704	trmt10c	84	48.108	Scleropages_formosus
MGP_PahariEiJ_G0016512	Trmt10c	88	47.315	ENSSMAG00000021322	trmt10c	74	48.303	Scophthalmus_maximus
MGP_PahariEiJ_G0016512	Trmt10c	90	45.477	ENSSDUG00000006430	trmt10c	86	44.153	Seriola_dumerili
MGP_PahariEiJ_G0016512	Trmt10c	62	52.529	ENSSLDG00000001023	trmt10c	73	55.365	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016512	Trmt10c	96	74.937	ENSSARG00000014342	TRMT10C	99	74.937	Sorex_araneus
MGP_PahariEiJ_G0016512	Trmt10c	80	51.343	ENSSPUG00000018495	TRMT10C	81	53.433	Sphenodon_punctatus
MGP_PahariEiJ_G0016512	Trmt10c	92	47.150	ENSSPAG00000016082	trmt10c	90	47.150	Stegastes_partitus
MGP_PahariEiJ_G0016512	Trmt10c	99	76.087	ENSSSCG00000011956	TRMT10C	99	76.087	Sus_scrofa
MGP_PahariEiJ_G0016512	Trmt10c	80	56.928	ENSTGUG00000013621	TRMT10C	99	56.928	Taeniopygia_guttata
MGP_PahariEiJ_G0016512	Trmt10c	69	50.171	ENSTRUG00000024252	trmt10c	88	50.171	Takifugu_rubripes
MGP_PahariEiJ_G0016512	Trmt10c	87	47.554	ENSTNIG00000009440	trmt10c	98	47.011	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016512	Trmt10c	96	75.940	ENSTBEG00000013894	TRMT10C	99	75.940	Tupaia_belangeri
MGP_PahariEiJ_G0016512	Trmt10c	95	76.962	ENSTTRG00000015004	TRMT10C	98	76.962	Tursiops_truncatus
MGP_PahariEiJ_G0016512	Trmt10c	99	75.122	ENSUAMG00000017378	TRMT10C	99	75.122	Ursus_americanus
MGP_PahariEiJ_G0016512	Trmt10c	99	75.122	ENSUMAG00000003252	TRMT10C	99	75.122	Ursus_maritimus
MGP_PahariEiJ_G0016512	Trmt10c	99	72.549	ENSVVUG00000021735	TRMT10C	93	72.549	Vulpes_vulpes
MGP_PahariEiJ_G0016512	Trmt10c	84	52.691	ENSXETG00000029921	trmt10c	86	61.161	Xenopus_tropicalis
MGP_PahariEiJ_G0016512	Trmt10c	68	53.633	ENSXCOG00000002876	trmt10c	94	52.595	Xiphophorus_couchianus
MGP_PahariEiJ_G0016512	Trmt10c	84	49.606	ENSXMAG00000019205	trmt10c	75	49.344	Xiphophorus_maculatus
MGP_PahariEiJ_G0016512	Trmt10c	54	31.416	ENSXMAG00000001869	trmt10b	67	31.532	Xiphophorus_maculatus