EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016561 (Gene tree)
Gene ID: 110329747
Gene Symbol: Arl13b
Alias: A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 56512 bases
Position: chr12:55669109-55725620
Accession: 110329747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0029367	MMR_HSR1	PF01926.23	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0029368	-	474	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029370	-	2176	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029367	-	3508	-	MGP_PahariEiJ_P0029367	427 (aa)	XP_021065251	UPI000A3041D9

Gene Model

Click here to download MGP_PahariEiJ_G0016561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016561	Arl13b	99	60.829	ENSAPOG00000013256	arl13b	99	62.704	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0016561	Arl13b	100	65.340	ENSACIG00000017582	arl13b	91	81.364	Amphilophus_citrinellus
MGP_PahariEiJ_G0016561	Arl13b	99	60.829	ENSAOCG00000002828	arl13b	99	62.937	Amphiprion_ocellaris
MGP_PahariEiJ_G0016561	Arl13b	94	60.000	ENSAPEG00000014654	arl13b	99	62.469	Amphiprion_percula
MGP_PahariEiJ_G0016561	Arl13b	95	61.836	ENSATEG00000017586	arl13b	97	60.922	Anabas_testudineus
MGP_PahariEiJ_G0016561	Arl13b	94	72.182	ENSACAG00000000523	ARL13B	99	71.703	Anolis_carolinensis
MGP_PahariEiJ_G0016561	Arl13b	100	57.674	ENSACLG00000024227	arl13b	87	80.488	Astatotilapia_calliptera
MGP_PahariEiJ_G0016561	Arl13b	100	61.751	ENSAMXG00000042824	arl13b	100	61.806	Astyanax_mexicanus
MGP_PahariEiJ_G0016561	Arl13b	99	68.941	ENSCAPG00000006764	ARL13B	84	91.284	Cavia_aperea
MGP_PahariEiJ_G0016561	Arl13b	99	74.824	ENSCPOG00000002558	ARL13B	99	74.588	Cavia_porcellus
MGP_PahariEiJ_G0016561	Arl13b	95	82.108	ENSCLAG00000006379	ARL13B	100	82.108	Chinchilla_lanigera
MGP_PahariEiJ_G0016561	Arl13b	100	72.979	ENSCPBG00000005599	ARL13B	100	72.979	Chrysemys_picta_bellii
MGP_PahariEiJ_G0016561	Arl13b	99	61.628	ENSCSEG00000005258	arl13b	99	62.704	Cynoglossus_semilaevis
MGP_PahariEiJ_G0016561	Arl13b	100	60.880	ENSCVAG00000001545	arl13b	87	79.091	Cyprinodon_variegatus
MGP_PahariEiJ_G0016561	Arl13b	100	63.510	ENSDARG00000012763	arl13b	84	80.455	Danio_rerio
MGP_PahariEiJ_G0016561	Arl13b	62	49.259	ENSEBUG00000006528	arl13b	90	46.667	Eptatretus_burgeri
MGP_PahariEiJ_G0016561	Arl13b	100	74.186	ENSEEUG00000010823	ARL13B	100	74.186	Erinaceus_europaeus
MGP_PahariEiJ_G0016561	Arl13b	94	65.261	ENSFALG00000001654	ARL13B	99	66.998	Ficedula_albicollis
MGP_PahariEiJ_G0016561	Arl13b	100	85.151	ENSFDAG00000006556	ARL13B	100	85.383	Fukomys_damarensis
MGP_PahariEiJ_G0016561	Arl13b	94	58.765	ENSFHEG00000016049	arl13b	99	57.882	Fundulus_heteroclitus
MGP_PahariEiJ_G0016561	Arl13b	82	68.797	ENSGMOG00000018628	arl13b	100	71.888	Gadus_morhua
MGP_PahariEiJ_G0016561	Arl13b	99	60.142	ENSGAFG00000000025	arl13b	82	79.545	Gambusia_affinis
MGP_PahariEiJ_G0016561	Arl13b	99	60.789	ENSGACG00000014228	arl13b	99	60.839	Gasterosteus_aculeatus
MGP_PahariEiJ_G0016561	Arl13b	100	72.979	ENSGAGG00000019336	ARL13B	100	72.748	Gopherus_agassizii
MGP_PahariEiJ_G0016561	Arl13b	100	62.558	ENSHBUG00000020619	arl13b	92	73.507	Haplochromis_burtoni
MGP_PahariEiJ_G0016561	Arl13b	94	62.035	ENSHCOG00000006106	arl13b	98	61.139	Hippocampus_comes
MGP_PahariEiJ_G0016561	Arl13b	99	62.937	ENSKMAG00000001122	arl13b	99	62.471	Kryptolebias_marmoratus
MGP_PahariEiJ_G0016561	Arl13b	99	60.780	ENSLBEG00000014612	arl13b	99	59.907	Labrus_bergylta
MGP_PahariEiJ_G0016561	Arl13b	100	65.079	ENSLOCG00000010465	arl13b	100	66.364	Lepisosteus_oculatus
MGP_PahariEiJ_G0016561	Arl13b	99	63.170	ENSMAMG00000021452	arl13b	99	61.239	Mastacembelus_armatus
MGP_PahariEiJ_G0016561	Arl13b	100	62.326	ENSMZEG00005017827	arl13b	100	61.628	Maylandia_zebra
MGP_PahariEiJ_G0016561	Arl13b	85	70.290	ENSMALG00000014655	arl13b	99	71.642	Monopterus_albus
MGP_PahariEiJ_G0016561	Arl13b	100	95.082	MGP_CAROLIEiJ_G0020856	Arl13b	100	95.082	Mus_caroli
MGP_PahariEiJ_G0016561	Arl13b	100	95.316	ENSMUSG00000022911	Arl13b	100	95.316	Mus_musculus
MGP_PahariEiJ_G0016561	Arl13b	100	95.316	MGP_SPRETEiJ_G0021763	Arl13b	100	95.316	Mus_spretus
MGP_PahariEiJ_G0016561	Arl13b	96	82.567	ENSMLUG00000017473	ARL13B	96	82.324	Myotis_lucifugus
MGP_PahariEiJ_G0016561	Arl13b	73	81.106	ENSNBRG00000004078	arl13b	97	72.862	Neolamprologus_brichardi
MGP_PahariEiJ_G0016561	Arl13b	100	79.118	ENSNLEG00000001772	ARL13B	100	78.190	Nomascus_leucogenys
MGP_PahariEiJ_G0016561	Arl13b	74	72.177	ENSMEUG00000008036	-	81	71.371	Notamacropus_eugenii
MGP_PahariEiJ_G0016561	Arl13b	100	82.599	ENSODEG00000011381	ARL13B	100	82.599	Octodon_degus
MGP_PahariEiJ_G0016561	Arl13b	100	62.385	ENSONIG00000001864	arl13b	100	61.609	Oreochromis_niloticus
MGP_PahariEiJ_G0016561	Arl13b	99	60.698	ENSORLG00000006350	arl13b	87	80.909	Oryzias_latipes
MGP_PahariEiJ_G0016561	Arl13b	99	61.574	ENSORLG00020013754	arl13b	99	61.072	Oryzias_latipes_hni
MGP_PahariEiJ_G0016561	Arl13b	99	60.930	ENSORLG00015012586	arl13b	99	60.140	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016561	Arl13b	51	76.037	ENSOMEG00000010187	arl13b	85	76.364	Oryzias_melastigma
MGP_PahariEiJ_G0016561	Arl13b	94	73.219	ENSPSIG00000018115	ARL13B	99	72.482	Pelodiscus_sinensis
MGP_PahariEiJ_G0016561	Arl13b	99	61.905	ENSPMGG00000004584	arl13b	99	61.239	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016561	Arl13b	100	54.795	ENSPCIG00000026984	ARL13B	98	54.110	Phascolarctos_cinereus
MGP_PahariEiJ_G0016561	Arl13b	100	61.253	ENSPFOG00000005379	arl13b	100	60.325	Poecilia_formosa
MGP_PahariEiJ_G0016561	Arl13b	94	60.099	ENSPLAG00000008699	arl13b	99	59.113	Poecilia_latipinna
MGP_PahariEiJ_G0016561	Arl13b	96	60.628	ENSPMEG00000015387	arl13b	99	59.662	Poecilia_mexicana
MGP_PahariEiJ_G0016561	Arl13b	100	61.021	ENSPREG00000006291	arl13b	100	60.233	Poecilia_reticulata
MGP_PahariEiJ_G0016561	Arl13b	70	78.744	ENSPNYG00000022879	arl13b	93	71.318	Pundamilia_nyererei
MGP_PahariEiJ_G0016561	Arl13b	100	59.954	ENSPNAG00000003803	arl13b	100	62.181	Pygocentrus_nattereri
MGP_PahariEiJ_G0016561	Arl13b	53	73.778	ENSSFOG00015005491	arl13b	85	74.429	Scleropages_formosus
MGP_PahariEiJ_G0016561	Arl13b	50	66.667	ENSSFOG00015023057	arl13b	85	66.667	Scleropages_formosus
MGP_PahariEiJ_G0016561	Arl13b	99	57.604	ENSSMAG00000015450	arl13b	99	58.065	Scophthalmus_maximus
MGP_PahariEiJ_G0016561	Arl13b	94	61.481	ENSSDUG00000005560	arl13b	96	61.975	Seriola_dumerili
MGP_PahariEiJ_G0016561	Arl13b	94	61.481	ENSSLDG00000013361	arl13b	99	61.975	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0016561	Arl13b	99	80.653	ENSSARG00000003872	ARL13B	99	80.653	Sorex_araneus
MGP_PahariEiJ_G0016561	Arl13b	54	93.043	ENSSPUG00000006649	ARL13B	89	93.182	Sphenodon_punctatus
MGP_PahariEiJ_G0016561	Arl13b	96	61.779	ENSSPAG00000016442	arl13b	91	61.779	Stegastes_partitus
MGP_PahariEiJ_G0016561	Arl13b	100	66.590	ENSTGUG00000013493	ARL13B	100	65.358	Taeniopygia_guttata
MGP_PahariEiJ_G0016561	Arl13b	100	48.124	ENSTRUG00000013035	-	86	67.727	Takifugu_rubripes
MGP_PahariEiJ_G0016561	Arl13b	50	66.512	ENSTRUG00000003641	arl13b	77	66.832	Takifugu_rubripes
MGP_PahariEiJ_G0016561	Arl13b	100	76.798	ENSVVUG00000021511	ARL13B	100	75.870	Vulpes_vulpes
MGP_PahariEiJ_G0016561	Arl13b	100	66.897	ENSXETG00000032383	ARL13B	97	77.985	Xenopus_tropicalis
MGP_PahariEiJ_G0016561	Arl13b	62	36.296	ENSXETG00000026166	arl13a	62	34.201	Xenopus_tropicalis
MGP_PahariEiJ_G0016561	Arl13b	81	73.034	ENSXCOG00000016955	arl13b	95	73.034	Xiphophorus_couchianus
MGP_PahariEiJ_G0016561	Arl13b	99	60.329	ENSXMAG00000002089	arl13b	99	59.859	Xiphophorus_maculatus