EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0016670 (Gene tree)
Gene ID: 110329372
Gene Symbol: Son
Alias: 2900011L12Rik
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 31907 bases
Position: chr12:82695144-82727050
Accession: 110329372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0029650	dsrm	PF00035.26	6.3e-10	1	1
MGP_PahariEiJ_P0029650	DND1_DSRM	PF14709.7	1.1e-11	1	1
MGP_PahariEiJ_P0029655	DND1_DSRM	PF14709.7	2.3e-08	1	1
MGP_PahariEiJ_P0029652	DND1_DSRM	PF14709.7	2.1e-07	1	1
MGP_PahariEiJ_P0029655	G-patch	PF01585.23	4.3e-16	1	1
MGP_PahariEiJ_P0029650	G-patch	PF01585.23	2.6e-15	1	1
MGP_PahariEiJ_P0029652	G-patch	PF01585.23	2.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0029662	-	658	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029660	-	598	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029659	-	700	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029658	-	654	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029661	-	800	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029655	-	2463	XM_021208969	MGP_PahariEiJ_P0029655	454 (aa)	XP_021064628	UPI000A3119D3
MGP_PahariEiJ_T0029654	-	8011	-	MGP_PahariEiJ_P0029654	2146 (aa)	-	-
MGP_PahariEiJ_T0029657	-	735	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029656	-	5460	-	MGP_PahariEiJ_P0029656	470 (aa)	-	-
MGP_PahariEiJ_T0029651	-	8458	-	MGP_PahariEiJ_P0029651	2349 (aa)	-	-
MGP_PahariEiJ_T0029650	-	8798	-	MGP_PahariEiJ_P0029650	2497 (aa)	-	-
MGP_PahariEiJ_T0029653	-	7591	XM_021208967	MGP_PahariEiJ_P0029653	2341 (aa)	XP_021064626	UPI000A30BDFE
MGP_PahariEiJ_T0029652	-	8473	-	MGP_PahariEiJ_P0029652	2464 (aa)	XP_021064623	UPI000A311BB6

Gene Model

Click here to download MGP_PahariEiJ_G0016670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0016670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016670	Son	100	98.391	ENSG00000159140	SON	100	98.391	Homo_sapiens
MGP_PahariEiJ_G0016670	Son	69	51.220	ENSACIG00000017870	-	94	64.356	Amphilophus_citrinellus
MGP_PahariEiJ_G0016670	Son	72	51.801	ENSATEG00000012732	-	58	53.985	Anabas_testudineus
MGP_PahariEiJ_G0016670	Son	93	73.585	ENSAPLG00000008908	-	99	76.341	Anas_platyrhynchos
MGP_PahariEiJ_G0016670	Son	99	73.068	ENSACAG00000004681	-	99	76.550	Anolis_carolinensis
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSANAG00000035426	SON	100	99.464	Aotus_nancymaae
MGP_PahariEiJ_G0016670	Son	78	49.304	ENSACLG00000007098	-	88	51.497	Astatotilapia_calliptera
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSCJAG00000046975	SON	100	99.732	Callithrix_jacchus
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSCAFG00020025305	SON	100	99.464	Canis_lupus_dingo
MGP_PahariEiJ_G0016670	Son	100	98.928	ENSTSYG00000008371	SON	100	98.928	Carlito_syrichta
MGP_PahariEiJ_G0016670	Son	85	91.429	ENSCAPG00000017011	SON	83	91.870	Cavia_aperea
MGP_PahariEiJ_G0016670	Son	100	98.899	ENSCPOG00000024278	SON	100	99.464	Cavia_porcellus
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSCCAG00000030234	SON	100	99.464	Cebus_capucinus
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSCATG00000029812	SON	100	99.464	Cercocebus_atys
MGP_PahariEiJ_G0016670	Son	100	99.119	ENSCLAG00000011776	SON	100	99.464	Chinchilla_lanigera
MGP_PahariEiJ_G0016670	Son	81	41.600	ENSCING00000007049	-	86	43.784	Ciona_intestinalis
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSCANG00000025986	SON	100	99.464	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0016670	Son	100	98.899	ENSCGRG00001016220	Son	100	99.732	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0016670	Son	94	98.832	ENSCGRG00000015260	Son	100	99.732	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0016670	Son	100	99.119	ENSDORG00000028617	-	100	99.464	Dipodomys_ordii
MGP_PahariEiJ_G0016670	Son	81	97.908	ENSETEG00000019427	SON	83	97.908	Echinops_telfairi
MGP_PahariEiJ_G0016670	Son	74	97.585	ENSEEUG00000002352	SON	76	98.454	Erinaceus_europaeus
MGP_PahariEiJ_G0016670	Son	72	51.482	ENSELUG00000003878	-	78	59.928	Esox_lucius
MGP_PahariEiJ_G0016670	Son	100	98.018	ENSFCAG00000028680	-	100	99.464	Felis_catus
MGP_PahariEiJ_G0016670	Son	95	71.005	ENSFALG00000002365	-	100	74.390	Ficedula_albicollis
MGP_PahariEiJ_G0016670	Son	100	98.678	ENSFDAG00000019128	SON	100	99.196	Fukomys_damarensis
MGP_PahariEiJ_G0016670	Son	98	72.973	ENSGALG00000052354	-	99	76.033	Gallus_gallus
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSGGOG00000010481	SON	100	99.464	Gorilla_gorilla
MGP_PahariEiJ_G0016670	Son	100	99.339	ENSHGLG00000010432	SON	100	99.464	Heterocephalus_glaber_female
MGP_PahariEiJ_G0016670	Son	80	98.630	ENSHGLG00100014915	SON	77	81.529	Heterocephalus_glaber_male
MGP_PahariEiJ_G0016670	Son	100	98.899	ENSSTOG00000020593	SON	100	99.464	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0016670	Son	100	99.339	ENSJJAG00000013491	-	100	99.732	Jaculus_jaculus
MGP_PahariEiJ_G0016670	Son	98	65.859	ENSLACG00000013385	-	99	70.874	Latimeria_chalumnae
MGP_PahariEiJ_G0016670	Son	80	66.027	ENSLOCG00000011021	-	75	66.173	Lepisosteus_oculatus
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSMFAG00000034427	SON	100	99.464	Macaca_fascicularis
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSMMUG00000005511	SON	100	99.464	Macaca_mulatta
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSMNEG00000031671	SON	100	99.464	Macaca_nemestrina
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSMLEG00000035039	SON	100	99.464	Mandrillus_leucophaeus
MGP_PahariEiJ_G0016670	Son	80	71.622	ENSMGAG00000014526	-	95	72.727	Meleagris_gallopavo
MGP_PahariEiJ_G0016670	Son	100	99.119	ENSMAUG00000002086	-	100	99.732	Mesocricetus_auratus
MGP_PahariEiJ_G0016670	Son	100	99.196	ENSMICG00000033920	SON	100	99.196	Microcebus_murinus
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSMOCG00000012860	-	100	99.732	Microtus_ochrogaster
MGP_PahariEiJ_G0016670	Son	75	51.989	ENSMALG00000006263	-	91	53.106	Monopterus_albus
MGP_PahariEiJ_G0016670	Son	100	100.000	MGP_CAROLIEiJ_G0020965	Son	100	100.000	Mus_caroli
MGP_PahariEiJ_G0016670	Son	100	100.000	ENSMUSG00000022961	Son	100	100.000	Mus_musculus
MGP_PahariEiJ_G0016670	Son	100	100.000	MGP_SPRETEiJ_G0021871	Son	100	100.000	Mus_spretus
MGP_PahariEiJ_G0016670	Son	100	98.678	ENSNGAG00000000062	-	100	99.464	Nannospalax_galili
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSNLEG00000004002	SON	100	99.464	Nomascus_leucogenys
MGP_PahariEiJ_G0016670	Son	100	97.587	ENSOPRG00000005068	SON	96	98.267	Ochotona_princeps
MGP_PahariEiJ_G0016670	Son	100	99.119	ENSODEG00000003658	-	100	99.464	Octodon_degus
MGP_PahariEiJ_G0016670	Son	81	56.522	ENSONIG00000003775	-	79	57.393	Oreochromis_niloticus
MGP_PahariEiJ_G0016670	Son	90	46.618	ENSORLG00020014016	-	91	46.618	Oryzias_latipes_hni
MGP_PahariEiJ_G0016670	Son	94	50.234	ENSORLG00015016415	-	78	50.234	Oryzias_latipes_hsok
MGP_PahariEiJ_G0016670	Son	82	98.969	ENSOGAG00000027319	SON	82	80.904	Otolemur_garnettii
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSPPAG00000033712	SON	100	99.464	Pan_paniscus
MGP_PahariEiJ_G0016670	Son	100	99.196	ENSPPRG00000019353	SON	100	99.464	Panthera_pardus
MGP_PahariEiJ_G0016670	Son	100	99.196	ENSPTIG00000017100	SON	100	99.464	Panthera_tigris_altaica
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSPTRG00000052356	-	100	100.000	Pan_troglodytes
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSPTRG00000013872	SON	100	99.464	Pan_troglodytes
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSPANG00000024077	SON	100	99.464	Papio_anubis
MGP_PahariEiJ_G0016670	Son	96	73.529	ENSPSIG00000008097	-	100	77.561	Pelodiscus_sinensis
MGP_PahariEiJ_G0016670	Son	80	54.945	ENSPMGG00000015598	-	93	51.325	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0016670	Son	100	96.035	ENSPCIG00000012884	-	100	97.855	Phascolarctos_cinereus
MGP_PahariEiJ_G0016670	Son	100	99.196	ENSPCOG00000015502	SON	100	99.196	Propithecus_coquereli
MGP_PahariEiJ_G0016670	Son	100	97.855	ENSPVAG00000011186	SON	50	98.267	Pteropus_vampyrus
MGP_PahariEiJ_G0016670	Son	100	98.238	ENSRBIG00000044269	-	100	100.000	Rhinopithecus_bieti
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSRROG00000042156	SON	100	99.464	Rhinopithecus_roxellana
MGP_PahariEiJ_G0016670	Son	100	99.464	ENSSBOG00000020885	SON	100	99.464	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0016670	Son	100	90.349	ENSSHAG00000008266	SON	100	91.283	Sarcophilus_harrisii
MGP_PahariEiJ_G0016670	Son	100	95.225	ENSSARG00000012369	SON	62	94.474	Sorex_araneus
MGP_PahariEiJ_G0016670	Son	95	69.406	ENSTGUG00000000486	-	100	72.927	Taeniopygia_guttata
MGP_PahariEiJ_G0016670	Son	98	53.289	ENSTNIG00000014468	-	98	53.289	Tetraodon_nigroviridis
MGP_PahariEiJ_G0016670	Son	80	99.507	ENSTBEG00000003193	SON	76	99.595	Tupaia_belangeri
MGP_PahariEiJ_G0016670	Son	94	96.364	ENSTTRG00000004692	SON	76	83.992	Tursiops_truncatus
MGP_PahariEiJ_G0016670	Son	94	95.174	ENSVPAG00000009150	SON	79	95.683	Vicugna_pacos
MGP_PahariEiJ_G0016670	Son	98	96.986	ENSVVUG00000022974	SON	80	82.785	Vulpes_vulpes
MGP_PahariEiJ_G0016670	Son	80	72.011	ENSXETG00000014115	son	94	69.565	Xenopus_tropicalis