EuRBPDB

Description

Ensembl ID: MGP_PahariEiJ_G0016689 (Gene tree)
Gene ID: 110329733
Gene Symbol: Chaf1b
Alias: 2600017H24Rik|CAF-1 subunit B|CAF-I 60 kDa subunit|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7
Full Name: chromatin assembly factor 1 subunit B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 21212 bases
Position: chr12:84943190-84964401
Accession: 110329733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0029754	eIF2A	PF08662.11	8.5e-06	1	1
MGP_PahariEiJ_P0029755	eIF2A	PF08662.11	8.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0029761	-	620	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029760	-	428	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029758	-	482	-	MGP_PahariEiJ_P0029758	96 (aa)	-	-
MGP_PahariEiJ_T0029759	-	669	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029754	-	1928	XM_021209567	MGP_PahariEiJ_P0029754	572 (aa)	XP_021065226	UPI000A3120C5
MGP_PahariEiJ_T0029755	-	1900	-	MGP_PahariEiJ_P0029755	572 (aa)	-	UPI000A3120C5
MGP_PahariEiJ_T0029756	-	2754	-	-	- (aa)	-	-
MGP_PahariEiJ_T0029757	-	714	-	MGP_PahariEiJ_P0029757	79 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0016689	Chaf1b	97	68.384	ENSACAG00000012679	CHAF1B	93	70.480	Anolis_carolinensis
MGP_PahariEiJ_G0016689	Chaf1b	100	94.930	ENSMUSG00000022945	Chaf1b	99	95.096	Mus_musculus
MGP_PahariEiJ_G0016689	Chaf1b	100	94.930	MGP_SPRETEiJ_G0021890	Chaf1b	99	95.096	Mus_spretus