EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017155 (Gene tree)
Gene ID: 110330407
Gene Symbol: Grsf1
Alias: D5Wsu31e
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 16494 bases
Position: chr13:77445287-77461780
Accession: 110330407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0032139	RRM_1	PF00076.22	1.9e-23	1	1
MGP_PahariEiJ_P0032138	RRM_1	PF00076.22	6.9e-23	1	1
MGP_PahariEiJ_P0032141	RRM_1	PF00076.22	7.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0032141	-	775	-	MGP_PahariEiJ_P0032141	137 (aa)	-	-
MGP_PahariEiJ_T0032140	-	866	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032138	-	2537	XM_021210447	MGP_PahariEiJ_P0032138	479 (aa)	XP_021066106	UPI000A30E60B
MGP_PahariEiJ_T0032139	-	2284	XM_021210448	MGP_PahariEiJ_P0032139	362 (aa)	XP_021066107	UPI000A306992
MGP_PahariEiJ_T0032143	-	422	-	MGP_PahariEiJ_P0032143	11 (aa)	-	UPI00015AA2CB
MGP_PahariEiJ_T0032142	-	486	-	MGP_PahariEiJ_P0032142	57 (aa)	-	-
MGP_PahariEiJ_T0032144	-	321	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0017155	Grsf1	70	67.532	MGP_PahariEiJ_G0030812	Hnrnph3	74	44.488
MGP_PahariEiJ_G0017155	Grsf1	99	50.370	MGP_PahariEiJ_G0031936	Hnrnph2	79	41.408
MGP_PahariEiJ_G0017155	Grsf1	99	51.852	MGP_PahariEiJ_G0017426	Hnrnph1	81	43.324
MGP_PahariEiJ_G0017155	Grsf1	97	45.185	MGP_PahariEiJ_G0026903	-	87	41.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSG00000132463	GRSF1	100	90.881	Homo_sapiens
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSAMEG00000005896	GRSF1	100	91.989	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017155	Grsf1	99	77.778	ENSACAG00000012921	GRSF1	91	61.905	Anolis_carolinensis
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSANAG00000022114	GRSF1	100	91.232	Aotus_nancymaae
MGP_PahariEiJ_G0017155	Grsf1	100	94.891	ENSBTAG00000008577	GRSF1	100	92.265	Bos_taurus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCJAG00000014477	GRSF1	99	92.208	Callithrix_jacchus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCAFG00000002922	GRSF1	100	92.171	Canis_familiaris
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCAFG00020027060	GRSF1	100	97.619	Canis_lupus_dingo
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSCHIG00000021580	GRSF1	100	90.833	Capra_hircus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSTSYG00000008487	-	100	93.082	Carlito_syrichta
MGP_PahariEiJ_G0017155	Grsf1	100	89.781	ENSTSYG00000028860	-	100	75.549	Carlito_syrichta
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSCAPG00000000156	GRSF1	100	86.688	Cavia_aperea
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSCPOG00000011662	GRSF1	100	86.981	Cavia_porcellus
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSCCAG00000028735	-	100	89.770	Cebus_capucinus
MGP_PahariEiJ_G0017155	Grsf1	91	78.764	ENSCCAG00000024189	-	87	75.182	Cebus_capucinus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCATG00000035808	GRSF1	99	91.613	Cercocebus_atys
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSCLAG00000003057	GRSF1	100	86.981	Chinchilla_lanigera
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCSAG00000004856	GRSF1	100	89.979	Chlorocebus_sabaeus
MGP_PahariEiJ_G0017155	Grsf1	99	77.037	ENSCPBG00000019502	GRSF1	86	66.528	Chrysemys_picta_bellii
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCANG00000037992	GRSF1	100	91.824	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCGRG00001019953	Grsf1	100	93.370	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSCGRG00000005357	Grsf1	100	93.352	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSDORG00000015145	Grsf1	100	95.620	Dipodomys_ordii
MGP_PahariEiJ_G0017155	Grsf1	100	93.431	ENSETEG00000013786	GRSF1	100	91.014	Echinops_telfairi
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSEASG00005016685	GRSF1	94	91.250	Equus_asinus_asinus
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSECAG00000024208	GRSF1	94	91.649	Equus_caballus
MGP_PahariEiJ_G0017155	Grsf1	93	59.259	ENSELUG00000011613	-	91	41.962	Esox_lucius
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSFCAG00000007270	GRSF1	100	92.067	Felis_catus
MGP_PahariEiJ_G0017155	Grsf1	98	55.970	ENSFALG00000008394	GRSF1	97	56.637	Ficedula_albicollis
MGP_PahariEiJ_G0017155	Grsf1	100	89.051	ENSFDAG00000008167	-	100	89.051	Fukomys_damarensis
MGP_PahariEiJ_G0017155	Grsf1	98	58.955	ENSGALG00000031160	GRSF1	77	49.211	Gallus_gallus
MGP_PahariEiJ_G0017155	Grsf1	99	75.735	ENSGAGG00000006013	GRSF1	99	66.322	Gopherus_agassizii
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSGGOG00000014852	-	100	90.566	Gorilla_gorilla
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSHGLG00000000661	GRSF1	100	85.319	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSHGLG00100005974	GRSF1	100	92.701	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSSTOG00000011569	GRSF1	100	97.674	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSJJAG00000005325	Grsf1	100	92.701	Jaculus_jaculus
MGP_PahariEiJ_G0017155	Grsf1	95	59.231	ENSLACG00000009507	GRSF1	97	51.841	Latimeria_chalumnae
MGP_PahariEiJ_G0017155	Grsf1	100	53.957	ENSLOCG00000011589	GRSF1	77	48.433	Lepisosteus_oculatus
MGP_PahariEiJ_G0017155	Grsf1	100	94.891	ENSLAFG00000017032	-	100	89.050	Loxodonta_africana
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSMFAG00000037346	GRSF1	99	91.290	Macaca_fascicularis
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSMMUG00000000380	GRSF1	99	91.558	Macaca_mulatta
MGP_PahariEiJ_G0017155	Grsf1	98	88.060	ENSMNEG00000023162	GRSF1	100	95.238	Macaca_nemestrina
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSMLEG00000007180	GRSF1	100	91.436	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017155	Grsf1	98	59.701	ENSMGAG00000009940	GRSF1	98	52.226	Meleagris_gallopavo
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSMICG00000005385	GRSF1	99	92.521	Microcebus_murinus
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSMOCG00000012769	-	100	94.161	Microtus_ochrogaster
MGP_PahariEiJ_G0017155	Grsf1	100	91.241	ENSMODG00000019088	GRSF1	90	80.000	Monodelphis_domestica
MGP_PahariEiJ_G0017155	Grsf1	100	98.540	MGP_CAROLIEiJ_G0027377	Grsf1	100	98.540	Mus_caroli
MGP_PahariEiJ_G0017155	Grsf1	100	98.540	ENSMUSG00000044221	Grsf1	100	98.540	Mus_musculus
MGP_PahariEiJ_G0017155	Grsf1	100	97.810	MGP_SPRETEiJ_G0028374	Grsf1	100	96.242	Mus_spretus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSMPUG00000009499	GRSF1	97	91.257	Mustela_putorius_furo
MGP_PahariEiJ_G0017155	Grsf1	100	92.857	ENSMLUG00000028158	GRSF1	100	89.589	Myotis_lucifugus
MGP_PahariEiJ_G0017155	Grsf1	100	94.891	ENSNGAG00000022132	-	100	94.891	Nannospalax_galili
MGP_PahariEiJ_G0017155	Grsf1	100	94.891	ENSNLEG00000007721	-	99	89.677	Nomascus_leucogenys
MGP_PahariEiJ_G0017155	Grsf1	82	91.071	ENSMEUG00000015942	GRSF1	99	70.950	Notamacropus_eugenii
MGP_PahariEiJ_G0017155	Grsf1	100	93.431	ENSOPRG00000010148	-	78	87.333	Ochotona_princeps
MGP_PahariEiJ_G0017155	Grsf1	89	90.984	ENSODEG00000004897	-	100	75.069	Octodon_degus
MGP_PahariEiJ_G0017155	Grsf1	99	85.294	ENSODEG00000010775	-	100	75.439	Octodon_degus
MGP_PahariEiJ_G0017155	Grsf1	100	91.971	ENSODEG00000001826	-	100	83.925	Octodon_degus
MGP_PahariEiJ_G0017155	Grsf1	94	63.415	ENSOANG00000013696	-	100	63.415	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSOCUG00000010029	GRSF1	100	79.536	Oryctolagus_cuniculus
MGP_PahariEiJ_G0017155	Grsf1	99	80.332	ENSOGAG00000026370	-	99	71.036	Otolemur_garnettii
MGP_PahariEiJ_G0017155	Grsf1	99	88.736	ENSOGAG00000000141	-	100	88.493	Otolemur_garnettii
MGP_PahariEiJ_G0017155	Grsf1	100	92.143	ENSOARG00000011898	GRSF1	100	90.959	Ovis_aries
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSPPAG00000042456	-	100	90.881	Pan_paniscus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSPPRG00000022913	GRSF1	100	92.067	Panthera_pardus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSPTIG00000008060	GRSF1	100	91.989	Panthera_tigris_altaica
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSPTRG00000016136	GRSF1	99	90.645	Pan_troglodytes
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSPANG00000018597	GRSF1	99	90.968	Papio_anubis
MGP_PahariEiJ_G0017155	Grsf1	97	73.000	ENSPSIG00000014267	-	96	72.637	Pelodiscus_sinensis
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSPEMG00000012814	Grsf1	100	93.923	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017155	Grsf1	100	90.511	ENSPCIG00000000627	GRSF1	100	80.665	Phascolarctos_cinereus
MGP_PahariEiJ_G0017155	Grsf1	99	91.803	ENSPPYG00000014812	GRSF1	100	75.676	Pongo_abelii
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSPCAG00000013949	GRSF1	100	83.721	Procavia_capensis
MGP_PahariEiJ_G0017155	Grsf1	100	94.891	ENSPVAG00000004338	GRSF1	100	84.760	Pteropus_vampyrus
MGP_PahariEiJ_G0017155	Grsf1	100	97.810	ENSRNOG00000003392	Grsf1	100	94.990	Rattus_norvegicus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSRBIG00000036494	GRSF1	99	91.613	Rhinopithecus_bieti
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSRROG00000035735	GRSF1	99	91.290	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017155	Grsf1	91	93.506	ENSSBOG00000032141	GRSF1	100	93.506	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017155	Grsf1	100	90.511	ENSSHAG00000018365	GRSF1	98	82.322	Sarcophilus_harrisii
MGP_PahariEiJ_G0017155	Grsf1	100	92.701	ENSSARG00000011681	GRSF1	100	91.234	Sorex_araneus
MGP_PahariEiJ_G0017155	Grsf1	99	67.391	ENSSPUG00000007576	GRSF1	99	57.692	Sphenodon_punctatus
MGP_PahariEiJ_G0017155	Grsf1	100	94.161	ENSSSCG00000008940	GRSF1	100	90.814	Sus_scrofa
MGP_PahariEiJ_G0017155	Grsf1	98	55.970	ENSTGUG00000001644	GRSF1	99	54.360	Taeniopygia_guttata
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSTBEG00000010173	GRSF1	100	92.532	Tupaia_belangeri
MGP_PahariEiJ_G0017155	Grsf1	99	86.150	ENSTTRG00000008405	GRSF1	97	86.352	Tursiops_truncatus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSUAMG00000008901	GRSF1	93	91.506	Ursus_americanus
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSUMAG00000003757	GRSF1	87	92.521	Ursus_maritimus
MGP_PahariEiJ_G0017155	Grsf1	100	95.620	ENSVPAG00000011889	GRSF1	100	79.224	Vicugna_pacos
MGP_PahariEiJ_G0017155	Grsf1	100	96.350	ENSVVUG00000004150	GRSF1	100	91.860	Vulpes_vulpes
MGP_PahariEiJ_G0017155	Grsf1	96	61.940	ENSXETG00000013850	grsf1	100	51.705	Xenopus_tropicalis