EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017235 (Gene tree)
Gene ID: 110330606
Gene Symbol: Helq
Alias: D430018E21Rik|Hel308
Full Name: helicase%2C POLQ like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 36488 bases
Position: chr13:89175178-89211665
Accession: 110330606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0032483	ResIII	PF04851.15	4.8e-11	1	1
MGP_PahariEiJ_P0032481	ResIII	PF04851.15	6.8e-11	1	1
MGP_PahariEiJ_P0032481	DEAD	PF00270.29	8.2e-17	1	1
MGP_PahariEiJ_P0032483	DEAD	PF00270.29	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0032481	-	3678	-	MGP_PahariEiJ_P0032481	1069 (aa)	XP_021066504	UPI000A314400
MGP_PahariEiJ_T0032482	-	1019	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032483	-	2969	-	MGP_PahariEiJ_P0032483	971 (aa)	-	-
MGP_PahariEiJ_T0032484	-	442	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032485	-	864	-	MGP_PahariEiJ_P0032485	170 (aa)	-	-
MGP_PahariEiJ_T0032486	-	518	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032487	-	648	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032488	-	792	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032489	-	1605	-	MGP_PahariEiJ_P0032489	311 (aa)	-	-
MGP_PahariEiJ_T0032490	-	595	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017235	Helq	99	78.571	ENSG00000163312	HELQ	100	75.408	Homo_sapiens
MGP_PahariEiJ_G0017235	Helq	94	78.529	ENSAMEG00000004921	HELQ	100	78.628	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017235	Helq	89	59.184	ENSACIG00000020216	helq	97	54.592	Amphilophus_citrinellus
MGP_PahariEiJ_G0017235	Helq	93	56.452	ENSAOCG00000014323	helq	91	64.151	Amphiprion_ocellaris
MGP_PahariEiJ_G0017235	Helq	91	67.123	ENSAPEG00000022964	helq	90	67.123	Amphiprion_percula
MGP_PahariEiJ_G0017235	Helq	77	56.469	ENSAPEG00000023153	-	87	56.601	Amphiprion_percula
MGP_PahariEiJ_G0017235	Helq	97	63.014	ENSATEG00000023420	helq	94	63.014	Anabas_testudineus
MGP_PahariEiJ_G0017235	Helq	92	73.973	ENSAPLG00000012292	HELQ	95	73.973	Anas_platyrhynchos
MGP_PahariEiJ_G0017235	Helq	97	71.622	ENSACAG00000010842	HELQ	95	72.603	Anolis_carolinensis
MGP_PahariEiJ_G0017235	Helq	99	76.190	ENSANAG00000033513	HELQ	100	75.181	Aotus_nancymaae
MGP_PahariEiJ_G0017235	Helq	77	61.796	ENSACLG00000010558	helq	98	61.689	Astatotilapia_calliptera
MGP_PahariEiJ_G0017235	Helq	90	66.216	ENSAMXG00000012252	helq	98	57.230	Astyanax_mexicanus
MGP_PahariEiJ_G0017235	Helq	97	76.190	ENSBTAG00000018151	HELQ	100	74.002	Bos_taurus
MGP_PahariEiJ_G0017235	Helq	72	38.697	WBGene00021905	helq-1	82	39.018	Caenorhabditis_elegans
MGP_PahariEiJ_G0017235	Helq	99	76.190	ENSCJAG00000005247	HELQ	100	74.796	Callithrix_jacchus
MGP_PahariEiJ_G0017235	Helq	97	75.889	ENSCAFG00000009108	HELQ	100	75.743	Canis_familiaris
MGP_PahariEiJ_G0017235	Helq	93	77.655	ENSCAFG00020010495	HELQ	100	77.655	Canis_lupus_dingo
MGP_PahariEiJ_G0017235	Helq	97	75.000	ENSCHIG00000020128	HELQ	100	74.451	Capra_hircus
MGP_PahariEiJ_G0017235	Helq	93	76.000	ENSTSYG00000012900	HELQ	91	77.551	Carlito_syrichta
MGP_PahariEiJ_G0017235	Helq	98	74.095	ENSCPOG00000009180	HELQ	98	74.095	Cavia_porcellus
MGP_PahariEiJ_G0017235	Helq	99	77.381	ENSCCAG00000036773	HELQ	100	75.340	Cebus_capucinus
MGP_PahariEiJ_G0017235	Helq	99	75.000	ENSCATG00000034442	HELQ	100	74.773	Cercocebus_atys
MGP_PahariEiJ_G0017235	Helq	99	74.765	ENSCLAG00000004733	HELQ	99	74.859	Chinchilla_lanigera
MGP_PahariEiJ_G0017235	Helq	99	75.045	ENSCSAG00000004405	HELQ	100	75.045	Chlorocebus_sabaeus
MGP_PahariEiJ_G0017235	Helq	96	71.622	ENSCPBG00000007787	HELQ	99	65.701	Chrysemys_picta_bellii
MGP_PahariEiJ_G0017235	Helq	70	56.061	ENSCING00000006332	-	94	52.418	Ciona_intestinalis
MGP_PahariEiJ_G0017235	Helq	97	82.090	ENSCANG00000002407	HELQ	100	75.045	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017235	Helq	97	86.585	ENSCGRG00001024451	Helq	99	81.775	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017235	Helq	94	84.851	ENSCGRG00000000309	Helq	99	84.851	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017235	Helq	92	63.014	ENSCVAG00000020159	helq	99	54.040	Cyprinodon_variegatus
MGP_PahariEiJ_G0017235	Helq	90	66.129	ENSDARG00000079818	helq	99	61.936	Danio_rerio
MGP_PahariEiJ_G0017235	Helq	72	42.503	FBgn0002899	mus301	75	42.497	Drosophila_melanogaster
MGP_PahariEiJ_G0017235	Helq	90	82.222	ENSETEG00000012220	HELQ	85	82.222	Echinops_telfairi
MGP_PahariEiJ_G0017235	Helq	97	76.190	ENSEASG00005013248	HELQ	100	75.321	Equus_asinus_asinus
MGP_PahariEiJ_G0017235	Helq	97	77.108	ENSECAG00000020717	HELQ	99	75.996	Equus_caballus
MGP_PahariEiJ_G0017235	Helq	60	81.818	ENSEEUG00000008373	-	69	78.886	Erinaceus_europaeus
MGP_PahariEiJ_G0017235	Helq	94	62.667	ENSELUG00000002083	helq	90	62.667	Esox_lucius
MGP_PahariEiJ_G0017235	Helq	99	78.750	ENSFCAG00000009921	HELQ	99	78.477	Felis_catus
MGP_PahariEiJ_G0017235	Helq	86	74.324	ENSFALG00000005255	HELQ	92	74.324	Ficedula_albicollis
MGP_PahariEiJ_G0017235	Helq	91	81.333	ENSFDAG00000018169	HELQ	99	78.680	Fukomys_damarensis
MGP_PahariEiJ_G0017235	Helq	97	65.217	ENSFHEG00000015542	helq	91	65.217	Fundulus_heteroclitus
MGP_PahariEiJ_G0017235	Helq	77	59.541	ENSGMOG00000000020	helq	97	59.360	Gadus_morhua
MGP_PahariEiJ_G0017235	Helq	93	75.342	ENSGALG00000011208	HELQ	90	75.342	Gallus_gallus
MGP_PahariEiJ_G0017235	Helq	97	64.384	ENSGAFG00000008037	helq	94	56.071	Gambusia_affinis
MGP_PahariEiJ_G0017235	Helq	78	61.031	ENSGACG00000001186	helq	97	63.158	Gasterosteus_aculeatus
MGP_PahariEiJ_G0017235	Helq	92	72.222	ENSGAGG00000015134	HELQ	99	65.543	Gopherus_agassizii
MGP_PahariEiJ_G0017235	Helq	97	86.957	ENSGGOG00000008598	HELQ	90	86.792	Gorilla_gorilla
MGP_PahariEiJ_G0017235	Helq	97	58.667	ENSHBUG00000001997	helq	99	54.364	Haplochromis_burtoni
MGP_PahariEiJ_G0017235	Helq	93	81.081	ENSHGLG00000019137	HELQ	99	76.682	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017235	Helq	93	81.081	ENSHGLG00100015489	HELQ	99	76.682	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017235	Helq	92	68.919	ENSIPUG00000003800	helq	88	68.919	Ictalurus_punctatus
MGP_PahariEiJ_G0017235	Helq	97	64.000	ENSKMAG00000016486	helq	91	64.000	Kryptolebias_marmoratus
MGP_PahariEiJ_G0017235	Helq	95	65.753	ENSLBEG00000021886	helq	91	65.753	Labrus_bergylta
MGP_PahariEiJ_G0017235	Helq	98	62.651	ENSLACG00000010835	HELQ	94	62.651	Latimeria_chalumnae
MGP_PahariEiJ_G0017235	Helq	97	68.000	ENSLOCG00000012099	helq	90	68.000	Lepisosteus_oculatus
MGP_PahariEiJ_G0017235	Helq	98	81.081	ENSLAFG00000001056	HELQ	100	77.324	Loxodonta_africana
MGP_PahariEiJ_G0017235	Helq	99	75.045	ENSMFAG00000040731	HELQ	100	75.045	Macaca_fascicularis
MGP_PahariEiJ_G0017235	Helq	99	75.000	ENSMMUG00000015350	HELQ	100	74.955	Macaca_mulatta
MGP_PahariEiJ_G0017235	Helq	99	75.136	ENSMNEG00000038829	HELQ	100	75.136	Macaca_nemestrina
MGP_PahariEiJ_G0017235	Helq	99	71.688	ENSMLEG00000035125	HELQ	97	74.951	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017235	Helq	97	64.000	ENSMAMG00000012364	helq	89	64.000	Mastacembelus_armatus
MGP_PahariEiJ_G0017235	Helq	97	60.000	ENSMZEG00005023270	helq	99	54.459	Maylandia_zebra
MGP_PahariEiJ_G0017235	Helq	92	76.712	ENSMGAG00000008112	HELQ	95	76.712	Meleagris_gallopavo
MGP_PahariEiJ_G0017235	Helq	88	84.573	ENSMAUG00000000249	Helq	99	84.573	Mesocricetus_auratus
MGP_PahariEiJ_G0017235	Helq	99	82.788	ENSMOCG00000014354	Helq	99	82.788	Microtus_ochrogaster
MGP_PahariEiJ_G0017235	Helq	91	63.014	ENSMMOG00000011313	helq	94	63.014	Mola_mola
MGP_PahariEiJ_G0017235	Helq	97	68.041	ENSMODG00000020774	HELQ	99	67.736	Monodelphis_domestica
MGP_PahariEiJ_G0017235	Helq	100	92.891	MGP_CAROLIEiJ_G0027457	Helq	100	92.891	Mus_caroli
MGP_PahariEiJ_G0017235	Helq	100	91.955	ENSMUSG00000035266	Helq	100	91.955	Mus_musculus
MGP_PahariEiJ_G0017235	Helq	100	92.423	MGP_SPRETEiJ_G0028454	Helq	100	92.423	Mus_spretus
MGP_PahariEiJ_G0017235	Helq	84	79.360	ENSMPUG00000014683	HELQ	100	75.617	Mustela_putorius_furo
MGP_PahariEiJ_G0017235	Helq	96	84.932	ENSMLUG00000017053	HELQ	93	84.932	Myotis_lucifugus
MGP_PahariEiJ_G0017235	Helq	97	85.507	ENSNLEG00000009088	HELQ	100	75.590	Nomascus_leucogenys
MGP_PahariEiJ_G0017235	Helq	78	62.470	ENSONIG00000012532	helq	99	62.470	Oreochromis_niloticus
MGP_PahariEiJ_G0017235	Helq	67	72.083	ENSOANG00000002113	-	99	72.083	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017235	Helq	97	77.351	ENSOCUG00000013294	HELQ	100	76.995	Oryctolagus_cuniculus
MGP_PahariEiJ_G0017235	Helq	75	62.500	ENSORLG00000022717	helq	89	57.966	Oryzias_latipes
MGP_PahariEiJ_G0017235	Helq	79	62.500	ENSORLG00015006855	helq	91	58.192	Oryzias_latipes_hsok
MGP_PahariEiJ_G0017235	Helq	97	65.753	ENSOMEG00000004983	helq	90	65.753	Oryzias_melastigma
MGP_PahariEiJ_G0017235	Helq	93	72.619	ENSOGAG00000014188	HELQ	92	73.494	Otolemur_garnettii
MGP_PahariEiJ_G0017235	Helq	95	76.683	ENSOARG00000002630	HELQ	100	75.445	Ovis_aries
MGP_PahariEiJ_G0017235	Helq	99	78.571	ENSPPAG00000004520	HELQ	100	75.227	Pan_paniscus
MGP_PahariEiJ_G0017235	Helq	99	78.750	ENSPPRG00000010520	HELQ	99	76.051	Panthera_pardus
MGP_PahariEiJ_G0017235	Helq	99	78.750	ENSPTIG00000021394	HELQ	99	76.438	Panthera_tigris_altaica
MGP_PahariEiJ_G0017235	Helq	99	78.571	ENSPTRG00000016232	HELQ	100	75.136	Pan_troglodytes
MGP_PahariEiJ_G0017235	Helq	99	75.000	ENSPANG00000005130	HELQ	100	74.864	Papio_anubis
MGP_PahariEiJ_G0017235	Helq	97	67.123	ENSPKIG00000021702	helq	94	67.123	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0017235	Helq	91	73.611	ENSPSIG00000015865	HELQ	94	74.648	Pelodiscus_sinensis
MGP_PahariEiJ_G0017235	Helq	91	62.121	ENSPMGG00000002986	helq	98	55.567	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0017235	Helq	99	84.471	ENSPEMG00000007325	Helq	99	84.471	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017235	Helq	77	63.014	ENSPMAG00000004427	helq	100	59.869	Petromyzon_marinus
MGP_PahariEiJ_G0017235	Helq	94	71.951	ENSPCIG00000019746	HELQ	99	69.102	Phascolarctos_cinereus
MGP_PahariEiJ_G0017235	Helq	95	57.143	ENSPFOG00000002091	helq	98	54.090	Poecilia_formosa
MGP_PahariEiJ_G0017235	Helq	97	65.753	ENSPLAG00000015199	helq	88	65.753	Poecilia_latipinna
MGP_PahariEiJ_G0017235	Helq	98	65.753	ENSPMEG00000014496	helq	89	65.753	Poecilia_mexicana
MGP_PahariEiJ_G0017235	Helq	98	64.865	ENSPREG00000012605	helq	89	64.865	Poecilia_reticulata
MGP_PahariEiJ_G0017235	Helq	99	77.381	ENSPPYG00000014897	HELQ	100	75.318	Pongo_abelii
MGP_PahariEiJ_G0017235	Helq	79	84.286	ENSPCAG00000004842	HELQ	71	84.286	Procavia_capensis
MGP_PahariEiJ_G0017235	Helq	97	73.810	ENSPVAG00000006438	HELQ	100	66.697	Pteropus_vampyrus
MGP_PahariEiJ_G0017235	Helq	90	52.834	ENSPNYG00000010575	helq	96	53.178	Pundamilia_nyererei
MGP_PahariEiJ_G0017235	Helq	92	65.333	ENSPNAG00000009397	helq	95	65.333	Pygocentrus_nattereri
MGP_PahariEiJ_G0017235	Helq	99	91.398	ENSRNOG00000002181	Helq	99	86.985	Rattus_norvegicus
MGP_PahariEiJ_G0017235	Helq	97	82.090	ENSRBIG00000041497	HELQ	100	74.864	Rhinopithecus_bieti
MGP_PahariEiJ_G0017235	Helq	97	82.090	ENSRROG00000045128	HELQ	100	74.955	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017235	Helq	99	77.444	ENSSBOG00000034314	HELQ	100	77.444	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017235	Helq	98	70.732	ENSSHAG00000006446	HELQ	100	69.455	Sarcophilus_harrisii
MGP_PahariEiJ_G0017235	Helq	76	67.606	ENSSFOG00015019460	helq	97	61.298	Scleropages_formosus
MGP_PahariEiJ_G0017235	Helq	97	61.333	ENSSDUG00000015665	helq	94	61.333	Seriola_dumerili
MGP_PahariEiJ_G0017235	Helq	85	78.289	ENSSARG00000013932	HELQ	99	78.289	Sorex_araneus
MGP_PahariEiJ_G0017235	Helq	87	51.681	ENSSPAG00000008705	helq	91	53.210	Stegastes_partitus
MGP_PahariEiJ_G0017235	Helq	99	75.348	ENSSSCG00000009236	HELQ	100	75.348	Sus_scrofa
MGP_PahariEiJ_G0017235	Helq	92	71.233	ENSTGUG00000002154	HELQ	95	71.233	Taeniopygia_guttata
MGP_PahariEiJ_G0017235	Helq	97	58.904	ENSTRUG00000018644	helq	99	54.676	Takifugu_rubripes
MGP_PahariEiJ_G0017235	Helq	78	61.118	ENSTNIG00000005673	helq	99	61.118	Tetraodon_nigroviridis
MGP_PahariEiJ_G0017235	Helq	99	76.190	ENSTTRG00000004895	HELQ	100	74.345	Tursiops_truncatus
MGP_PahariEiJ_G0017235	Helq	97	75.303	ENSUAMG00000012816	HELQ	100	75.159	Ursus_americanus
MGP_PahariEiJ_G0017235	Helq	97	77.299	ENSUMAG00000008823	HELQ	100	76.916	Ursus_maritimus
MGP_PahariEiJ_G0017235	Helq	99	73.810	ENSVPAG00000011357	HELQ	100	71.014	Vicugna_pacos
MGP_PahariEiJ_G0017235	Helq	95	77.202	ENSVVUG00000015676	HELQ	100	76.075	Vulpes_vulpes
MGP_PahariEiJ_G0017235	Helq	76	72.603	ENSXETG00000001831	helq	100	67.264	Xenopus_tropicalis
MGP_PahariEiJ_G0017235	Helq	75	65.079	ENSXCOG00000016210	helq	98	61.077	Xiphophorus_couchianus
MGP_PahariEiJ_G0017235	Helq	75	65.079	ENSXMAG00000012563	helq	98	61.077	Xiphophorus_maculatus