EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017236 (Gene tree)
Gene ID: 110330895
Gene Symbol: Mrps18c
Alias: 1110037D14Rik
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5376 bases
Position: chr13:89211810-89217185
Accession: 110330895
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0032493	Ribosomal_S18	PF01084.20	3.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0032494	-	252	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032493	-	432	-	MGP_PahariEiJ_P0032493	143 (aa)	XP_021066855	UPI000A305426
MGP_PahariEiJ_T0032492	-	451	-	MGP_PahariEiJ_P0032492	42 (aa)	-	-
MGP_PahariEiJ_T0032491	-	256	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0017236	Mrps18c	85	32.331	MGP_PahariEiJ_G0020648	Mrps18a	87	32.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSG00000163319	MRPS18C	100	80.137	Homo_sapiens
MGP_PahariEiJ_G0017236	Mrps18c	100	73.288	ENSAMEG00000004915	MRPS18C	100	73.288	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017236	Mrps18c	99	67.105	ENSANAG00000025323	-	95	67.105	Aotus_nancymaae
MGP_PahariEiJ_G0017236	Mrps18c	100	68.493	ENSANAG00000028055	-	100	68.493	Aotus_nancymaae
MGP_PahariEiJ_G0017236	Mrps18c	100	54.795	ENSBTAG00000049836	-	100	54.795	Bos_taurus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSBTAG00000018155	MRPS18C	100	80.137	Bos_taurus
MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	ENSCJAG00000042247	MRPS18C	97	79.452	Callithrix_jacchus
MGP_PahariEiJ_G0017236	Mrps18c	100	81.507	ENSCAFG00020010491	MRPS18C	100	81.507	Canis_lupus_dingo
MGP_PahariEiJ_G0017236	Mrps18c	100	68.493	ENSCHIG00000022740	-	100	68.493	Capra_hircus
MGP_PahariEiJ_G0017236	Mrps18c	99	63.014	ENSCHIG00000018805	-	99	63.014	Capra_hircus
MGP_PahariEiJ_G0017236	Mrps18c	100	50.000	ENSCHIG00000016551	-	100	50.000	Capra_hircus
MGP_PahariEiJ_G0017236	Mrps18c	88	85.714	ENSCHIG00000004461	-	86	85.714	Capra_hircus
MGP_PahariEiJ_G0017236	Mrps18c	75	71.028	ENSCHIG00000019359	-	98	71.028	Capra_hircus
MGP_PahariEiJ_G0017236	Mrps18c	100	76.712	ENSTSYG00000012924	MRPS18C	100	76.712	Carlito_syrichta
MGP_PahariEiJ_G0017236	Mrps18c	100	76.712	ENSCPOG00000009198	MRPS18C	100	76.712	Cavia_porcellus
MGP_PahariEiJ_G0017236	Mrps18c	99	66.897	ENSCCAG00000025155	-	95	66.897	Cebus_capucinus
MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	ENSCCAG00000026577	-	100	79.452	Cebus_capucinus
MGP_PahariEiJ_G0017236	Mrps18c	100	70.629	ENSCCAG00000028283	-	100	70.629	Cebus_capucinus
MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	ENSCCAG00000019347	-	100	77.397	Cebus_capucinus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSCATG00000040697	MRPS18C	100	80.822	Cercocebus_atys
MGP_PahariEiJ_G0017236	Mrps18c	100	78.767	ENSCLAG00000008205	-	100	78.767	Chinchilla_lanigera
MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	ENSCLAG00000017397	-	100	77.397	Chinchilla_lanigera
MGP_PahariEiJ_G0017236	Mrps18c	99	58.333	ENSCANG00000037347	-	97	58.333	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017236	Mrps18c	100	69.178	ENSCANG00000041165	-	100	69.178	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSCANG00000038907	MRPS18C	100	80.822	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017236	Mrps18c	100	85.315	ENSCGRG00001000103	Mrps18c	100	85.315	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017236	Mrps18c	100	85.315	ENSCGRG00000002192	Mrps18c	100	85.315	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017236	Mrps18c	99	79.167	ENSDORG00000012749	Mrps18c	100	79.167	Dipodomys_ordii
MGP_PahariEiJ_G0017236	Mrps18c	100	53.425	ENSETEG00000012223	-	100	53.425	Echinops_telfairi
MGP_PahariEiJ_G0017236	Mrps18c	100	83.448	ENSEASG00005013234	MRPS18C	100	83.448	Equus_asinus_asinus
MGP_PahariEiJ_G0017236	Mrps18c	100	84.138	ENSECAG00000020387	MRPS18C	100	84.138	Equus_caballus
MGP_PahariEiJ_G0017236	Mrps18c	100	59.184	ENSEEUG00000003504	MRPS18C	99	59.184	Erinaceus_europaeus
MGP_PahariEiJ_G0017236	Mrps18c	100	81.507	ENSFCAG00000042464	MRPS18C	100	81.507	Felis_catus
MGP_PahariEiJ_G0017236	Mrps18c	100	65.753	ENSFDAG00000008778	-	100	65.753	Fukomys_damarensis
MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	ENSFDAG00000000250	-	100	77.397	Fukomys_damarensis
MGP_PahariEiJ_G0017236	Mrps18c	100	54.110	ENSGGOG00000037903	-	100	54.110	Gorilla_gorilla
MGP_PahariEiJ_G0017236	Mrps18c	100	65.753	ENSGGOG00000008603	MRPS18C	100	65.753	Gorilla_gorilla
MGP_PahariEiJ_G0017236	Mrps18c	100	58.904	ENSGGOG00000040785	-	100	58.904	Gorilla_gorilla
MGP_PahariEiJ_G0017236	Mrps18c	100	73.288	ENSHGLG00000020134	-	100	73.288	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	ENSHGLG00000002953	-	100	79.452	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017236	Mrps18c	100	72.028	ENSHGLG00000012671	-	98	72.028	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	ENSHGLG00100016235	-	100	79.452	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017236	Mrps18c	100	72.028	ENSHGLG00100015568	-	98	72.028	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017236	Mrps18c	100	73.288	ENSHGLG00100019678	-	100	73.288	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017236	Mrps18c	100	78.621	ENSSTOG00000007989	MRPS18C	100	78.621	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017236	Mrps18c	50	86.111	ENSJJAG00000022437	Mrps18c	74	86.111	Jaculus_jaculus
MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	ENSLAFG00000001059	MRPS18C	100	77.397	Loxodonta_africana
MGP_PahariEiJ_G0017236	Mrps18c	100	63.699	ENSMFAG00000041276	-	100	63.699	Macaca_fascicularis
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSMFAG00000003991	MRPS18C	100	80.137	Macaca_fascicularis
MGP_PahariEiJ_G0017236	Mrps18c	100	69.178	ENSMMUG00000039146	-	100	69.178	Macaca_mulatta
MGP_PahariEiJ_G0017236	Mrps18c	100	71.233	ENSMMUG00000048717	-	100	71.233	Macaca_mulatta
MGP_PahariEiJ_G0017236	Mrps18c	100	63.014	ENSMMUG00000015353	MRPS18C	100	63.014	Macaca_mulatta
MGP_PahariEiJ_G0017236	Mrps18c	100	60.274	ENSMNEG00000018700	-	100	60.274	Macaca_nemestrina
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSMNEG00000043663	MRPS18C	100	80.137	Macaca_nemestrina
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSMLEG00000038884	MRPS18C	100	80.822	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017236	Mrps18c	100	62.329	ENSMICG00000037615	-	100	62.329	Microcebus_murinus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSMICG00000032609	-	100	80.137	Microcebus_murinus
MGP_PahariEiJ_G0017236	Mrps18c	100	84.615	ENSMOCG00000009898	-	100	84.615	Microtus_ochrogaster
MGP_PahariEiJ_G0017236	Mrps18c	100	86.713	ENSMOCG00000015591	-	100	86.713	Microtus_ochrogaster
MGP_PahariEiJ_G0017236	Mrps18c	97	69.231	ENSMODG00000020773	MRPS18C	99	69.231	Monodelphis_domestica
MGP_PahariEiJ_G0017236	Mrps18c	100	97.203	MGP_CAROLIEiJ_G0027458	Mrps18c	100	97.203	Mus_caroli
MGP_PahariEiJ_G0017236	Mrps18c	100	96.503	ENSMUSG00000016833	Mrps18c	100	96.503	Mus_musculus
MGP_PahariEiJ_G0017236	Mrps18c	83	97.479	MGP_SPRETEiJ_G0028455	Mrps18c	93	97.479	Mus_spretus
MGP_PahariEiJ_G0017236	Mrps18c	100	79.452	ENSMLUG00000017057	MRPS18C	100	79.452	Myotis_lucifugus
MGP_PahariEiJ_G0017236	Mrps18c	91	84.615	ENSNGAG00000015980	Mrps18c	100	82.517	Nannospalax_galili
MGP_PahariEiJ_G0017236	Mrps18c	100	72.603	ENSNLEG00000018188	-	100	72.603	Nomascus_leucogenys
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSNLEG00000009119	MRPS18C	100	80.137	Nomascus_leucogenys
MGP_PahariEiJ_G0017236	Mrps18c	69	74.000	ENSOPRG00000004113	MRPS18C	68	74.000	Ochotona_princeps
MGP_PahariEiJ_G0017236	Mrps18c	100	76.027	ENSODEG00000007599	-	100	76.027	Octodon_degus
MGP_PahariEiJ_G0017236	Mrps18c	100	76.712	ENSODEG00000020349	-	100	76.712	Octodon_degus
MGP_PahariEiJ_G0017236	Mrps18c	100	78.082	ENSOARG00000002770	MRPS18C	100	78.082	Ovis_aries
MGP_PahariEiJ_G0017236	Mrps18c	100	55.479	ENSPPAG00000037400	-	100	55.479	Pan_paniscus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSPPAG00000037122	MRPS18C	100	80.137	Pan_paniscus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSPPRG00000011089	MRPS18C	100	80.822	Panthera_pardus
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSPTIG00000021242	MRPS18C	100	80.137	Panthera_tigris_altaica
MGP_PahariEiJ_G0017236	Mrps18c	100	53.425	ENSPTRG00000047058	-	100	53.425	Pan_troglodytes
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSPTRG00000016233	MRPS18C	100	80.137	Pan_troglodytes
MGP_PahariEiJ_G0017236	Mrps18c	100	69.178	ENSPANG00000034202	-	100	69.178	Papio_anubis
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSPANG00000033931	MRPS18C	100	80.137	Papio_anubis
MGP_PahariEiJ_G0017236	Mrps18c	100	84.615	ENSPEMG00000008390	Mrps18c	100	84.615	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017236	Mrps18c	77	69.091	ENSPCIG00000000097	-	78	69.091	Phascolarctos_cinereus
MGP_PahariEiJ_G0017236	Mrps18c	99	69.014	ENSPCIG00000005376	-	100	69.014	Phascolarctos_cinereus
MGP_PahariEiJ_G0017236	Mrps18c	71	85.294	ENSPCIG00000019737	-	100	85.294	Phascolarctos_cinereus
MGP_PahariEiJ_G0017236	Mrps18c	99	75.694	ENSPPYG00000025835	-	99	75.694	Pongo_abelii
MGP_PahariEiJ_G0017236	Mrps18c	100	81.507	ENSPPYG00000025867	MRPS18C	100	81.507	Pongo_abelii
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSPCAG00000004975	MRPS18C	100	80.137	Procavia_capensis
MGP_PahariEiJ_G0017236	Mrps18c	100	82.192	ENSPCOG00000017634	MRPS18C	100	82.192	Propithecus_coquereli
MGP_PahariEiJ_G0017236	Mrps18c	69	75.248	ENSPVAG00000006439	MRPS18C	100	75.248	Pteropus_vampyrus
MGP_PahariEiJ_G0017236	Mrps18c	100	92.308	ENSRNOG00000002178	Mrps18c	100	92.308	Rattus_norvegicus
MGP_PahariEiJ_G0017236	Mrps18c	100	54.795	ENSRBIG00000031637	-	100	54.795	Rhinopithecus_bieti
MGP_PahariEiJ_G0017236	Mrps18c	100	71.918	ENSRBIG00000035023	-	100	71.918	Rhinopithecus_bieti
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSRBIG00000041685	MRPS18C	100	80.822	Rhinopithecus_bieti
MGP_PahariEiJ_G0017236	Mrps18c	100	71.918	ENSRROG00000033834	-	100	71.918	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017236	Mrps18c	100	54.110	ENSRROG00000030722	-	100	54.110	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSRROG00000044334	MRPS18C	100	80.822	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSSBOG00000027568	-	100	80.137	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017236	Mrps18c	99	63.380	ENSSBOG00000032292	-	98	65.441	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017236	Mrps18c	100	62.329	ENSSBOG00000029234	-	100	62.329	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017236	Mrps18c	99	72.414	ENSSBOG00000022205	-	92	72.414	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017236	Mrps18c	81	84.483	ENSSHAG00000007084	MRPS18C	80	84.483	Sarcophilus_harrisii
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSSSCG00000038042	MRPS18C	100	80.137	Sus_scrofa
MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	ENSTBEG00000012505	MRPS18C	100	80.137	Tupaia_belangeri
MGP_PahariEiJ_G0017236	Mrps18c	100	83.562	ENSTTRG00000004897	MRPS18C	100	83.562	Tursiops_truncatus
MGP_PahariEiJ_G0017236	Mrps18c	100	82.192	ENSUAMG00000012878	MRPS18C	100	82.192	Ursus_americanus
MGP_PahariEiJ_G0017236	Mrps18c	100	82.192	ENSUMAG00000008829	MRPS18C	100	82.192	Ursus_maritimus
MGP_PahariEiJ_G0017236	Mrps18c	100	82.192	ENSVPAG00000011358	MRPS18C	100	82.192	Vicugna_pacos
MGP_PahariEiJ_G0017236	Mrps18c	100	80.822	ENSVVUG00000015672	MRPS18C	100	80.822	Vulpes_vulpes