EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017247 (Gene tree)
Gene ID: 110330552
Gene Symbol: Aff1
Alias: 9630032B01Rik|Af4|Mllt2h|Rob
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 161814 bases
Position: chr13:91942263-92104076
Accession: 110330552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0032554	AF-4	PF05110.13	0	1	1
MGP_PahariEiJ_P0032556	AF-4	PF05110.13	0	1	1
MGP_PahariEiJ_P0032555	AF-4	PF05110.13	7.7e-264	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0032556	-	8156	-	MGP_PahariEiJ_P0032556	1223 (aa)	-	-
MGP_PahariEiJ_T0032557	-	632	-	-	- (aa)	-	-
MGP_PahariEiJ_T0032554	-	8163	-	MGP_PahariEiJ_P0032554	1215 (aa)	XP_021066399	UPI000A3107CA
MGP_PahariEiJ_T0032555	-	2753	-	MGP_PahariEiJ_P0032555	869 (aa)	-	-
MGP_PahariEiJ_T0032553	-	1440	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017247	Aff1	100	68.780	ENSG00000172493	AFF1	98	72.973	Homo_sapiens
MGP_PahariEiJ_G0017247	Aff1	69	39.036	ENSAPOG00000002994	-	53	36.813	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0017247	Aff1	99	66.347	ENSAMEG00000003337	AFF1	100	66.667	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017247	Aff1	50	78.571	ENSACIG00000022732	aff2	56	80.556	Amphilophus_citrinellus
MGP_PahariEiJ_G0017247	Aff1	60	31.114	ENSACIG00000010525	aff4	84	37.017	Amphilophus_citrinellus
MGP_PahariEiJ_G0017247	Aff1	52	48.897	ENSAPLG00000003660	-	72	48.897	Anas_platyrhynchos
MGP_PahariEiJ_G0017247	Aff1	99	48.720	ENSAPLG00000004059	AFF1	99	47.840	Anas_platyrhynchos
MGP_PahariEiJ_G0017247	Aff1	99	46.968	ENSACAG00000012192	AFF1	99	46.048	Anolis_carolinensis
MGP_PahariEiJ_G0017247	Aff1	100	68.353	ENSANAG00000017095	AFF1	100	69.976	Aotus_nancymaae
MGP_PahariEiJ_G0017247	Aff1	60	37.638	ENSACLG00000011879	aff4	78	35.497	Astatotilapia_calliptera
MGP_PahariEiJ_G0017247	Aff1	52	58.333	ENSACLG00000002905	-	63	58.333	Astatotilapia_calliptera
MGP_PahariEiJ_G0017247	Aff1	100	68.193	ENSCJAG00000006047	AFF1	100	69.095	Callithrix_jacchus
MGP_PahariEiJ_G0017247	Aff1	100	65.947	ENSCAFG00000009476	AFF1	100	66.321	Canis_familiaris
MGP_PahariEiJ_G0017247	Aff1	91	70.918	ENSCAFG00020008224	AFF1	99	63.251	Canis_lupus_dingo
MGP_PahariEiJ_G0017247	Aff1	68	38.950	ENSCAFG00020000956	AFF4	50	59.722	Canis_lupus_dingo
MGP_PahariEiJ_G0017247	Aff1	94	64.362	ENSTSYG00000002039	AFF1	100	64.362	Carlito_syrichta
MGP_PahariEiJ_G0017247	Aff1	68	51.136	ENSCAPG00000012999	AFF3	85	51.136	Cavia_aperea
MGP_PahariEiJ_G0017247	Aff1	99	55.918	ENSCAPG00000006540	AFF1	100	55.673	Cavia_aperea
MGP_PahariEiJ_G0017247	Aff1	99	58.114	ENSCPOG00000034568	AFF1	99	56.418	Cavia_porcellus
MGP_PahariEiJ_G0017247	Aff1	67	51.136	ENSCPOG00000006346	AFF3	81	51.136	Cavia_porcellus
MGP_PahariEiJ_G0017247	Aff1	96	66.223	ENSCCAG00000027623	AFF1	97	73.096	Cebus_capucinus
MGP_PahariEiJ_G0017247	Aff1	100	70.353	ENSCATG00000039501	AFF1	98	75.510	Cercocebus_atys
MGP_PahariEiJ_G0017247	Aff1	99	56.861	ENSCLAG00000005537	AFF1	99	57.650	Chinchilla_lanigera
MGP_PahariEiJ_G0017247	Aff1	70	53.409	ENSCLAG00000017100	AFF3	85	53.409	Chinchilla_lanigera
MGP_PahariEiJ_G0017247	Aff1	100	70.353	ENSCSAG00000004333	AFF1	100	70.777	Chlorocebus_sabaeus
MGP_PahariEiJ_G0017247	Aff1	77	71.074	ENSCHOG00000000041	AFF1	77	74.793	Choloepus_hoffmanni
MGP_PahariEiJ_G0017247	Aff1	99	50.119	ENSCPBG00000005382	AFF1	100	49.721	Chrysemys_picta_bellii
MGP_PahariEiJ_G0017247	Aff1	100	70.000	ENSCANG00000037514	AFF1	100	70.504	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017247	Aff1	100	78.254	ENSCGRG00001015769	Aff1	100	78.092	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017247	Aff1	59	76.639	ENSCGRG00000004837	Aff1	100	74.413	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017247	Aff1	80	36.051	ENSCSEG00000017002	aff4	51	36.923	Cynoglossus_semilaevis
MGP_PahariEiJ_G0017247	Aff1	73	66.221	ENSDNOG00000048783	-	100	67.670	Dasypus_novemcinctus
MGP_PahariEiJ_G0017247	Aff1	99	67.718	ENSDORG00000013881	Aff1	100	68.123	Dipodomys_ordii
MGP_PahariEiJ_G0017247	Aff1	94	79.762	ENSETEG00000014905	AFF1	100	60.016	Echinops_telfairi
MGP_PahariEiJ_G0017247	Aff1	100	67.120	ENSEASG00005012760	AFF1	100	67.120	Equus_asinus_asinus
MGP_PahariEiJ_G0017247	Aff1	100	67.280	ENSECAG00000003619	AFF1	100	67.040	Equus_caballus
MGP_PahariEiJ_G0017247	Aff1	75	95.000	ENSEEUG00000013664	-	74	95.000	Erinaceus_europaeus
MGP_PahariEiJ_G0017247	Aff1	70	57.143	ENSELUG00000023871	aff4	70	46.377	Esox_lucius
MGP_PahariEiJ_G0017247	Aff1	99	63.506	ENSFCAG00000029806	AFF1	99	64.382	Felis_catus
MGP_PahariEiJ_G0017247	Aff1	72	60.606	ENSFALG00000008916	AFF4	85	60.606	Ficedula_albicollis
MGP_PahariEiJ_G0017247	Aff1	99	44.710	ENSFALG00000005554	AFF1	99	44.817	Ficedula_albicollis
MGP_PahariEiJ_G0017247	Aff1	60	36.042	ENSFALG00000012089	AFF2	83	36.039	Ficedula_albicollis
MGP_PahariEiJ_G0017247	Aff1	99	60.289	ENSFDAG00000018846	AFF1	99	59.711	Fukomys_damarensis
MGP_PahariEiJ_G0017247	Aff1	60	45.896	ENSGMOG00000008803	aff4	63	45.594	Gadus_morhua
MGP_PahariEiJ_G0017247	Aff1	77	36.533	ENSGALG00000030147	AFF4	83	36.280	Gallus_gallus
MGP_PahariEiJ_G0017247	Aff1	92	51.852	ENSGALG00000043935	AFF1	100	43.299	Gallus_gallus
MGP_PahariEiJ_G0017247	Aff1	78	36.224	ENSGAFG00000005288	aff4	78	34.964	Gambusia_affinis
MGP_PahariEiJ_G0017247	Aff1	72	34.895	ENSGACG00000016333	-	55	40.805	Gasterosteus_aculeatus
MGP_PahariEiJ_G0017247	Aff1	78	36.821	ENSGACG00000020734	aff4	79	35.787	Gasterosteus_aculeatus
MGP_PahariEiJ_G0017247	Aff1	78	36.630	ENSGAGG00000020214	AFF4	79	34.667	Gopherus_agassizii
MGP_PahariEiJ_G0017247	Aff1	100	69.663	ENSGGOG00000008497	AFF1	100	70.088	Gorilla_gorilla
MGP_PahariEiJ_G0017247	Aff1	60	37.638	ENSHBUG00000021987	aff4	79	35.700	Haplochromis_burtoni
MGP_PahariEiJ_G0017247	Aff1	99	61.107	ENSHGLG00000001384	AFF1	99	60.657	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017247	Aff1	99	59.217	ENSHGLG00100016607	AFF1	100	59.691	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017247	Aff1	100	71.669	ENSSTOG00000006530	AFF1	99	70.947	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017247	Aff1	100	69.330	ENSJJAG00000022877	Aff1	100	69.330	Jaculus_jaculus
MGP_PahariEiJ_G0017247	Aff1	68	36.543	ENSKMAG00000013113	-	70	36.683	Kryptolebias_marmoratus
MGP_PahariEiJ_G0017247	Aff1	78	35.832	ENSKMAG00000010443	aff4	52	35.294	Kryptolebias_marmoratus
MGP_PahariEiJ_G0017247	Aff1	99	46.061	ENSLACG00000007303	AFF1	99	45.462	Latimeria_chalumnae
MGP_PahariEiJ_G0017247	Aff1	78	38.313	ENSLACG00000008849	AFF4	99	35.427	Latimeria_chalumnae
MGP_PahariEiJ_G0017247	Aff1	56	61.924	ENSLAFG00000015880	-	97	61.290	Loxodonta_africana
MGP_PahariEiJ_G0017247	Aff1	100	70.513	ENSMFAG00000037700	AFF1	98	75.578	Macaca_fascicularis
MGP_PahariEiJ_G0017247	Aff1	100	70.513	ENSMMUG00000014076	AFF1	100	70.937	Macaca_mulatta
MGP_PahariEiJ_G0017247	Aff1	100	70.353	ENSMNEG00000031536	AFF1	100	70.777	Macaca_nemestrina
MGP_PahariEiJ_G0017247	Aff1	100	70.353	ENSMLEG00000039099	AFF1	100	70.777	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017247	Aff1	69	38.626	ENSMAMG00000016189	-	56	41.071	Mastacembelus_armatus
MGP_PahariEiJ_G0017247	Aff1	60	37.638	ENSMZEG00005003218	aff4	79	35.497	Maylandia_zebra
MGP_PahariEiJ_G0017247	Aff1	99	44.471	ENSMGAG00000007646	AFF1	99	43.745	Meleagris_gallopavo
MGP_PahariEiJ_G0017247	Aff1	77	37.181	ENSMGAG00000009144	AFF4	79	35.240	Meleagris_gallopavo
MGP_PahariEiJ_G0017247	Aff1	60	34.338	ENSMGAG00000008246	-	94	33.860	Meleagris_gallopavo
MGP_PahariEiJ_G0017247	Aff1	100	77.016	ENSMAUG00000010241	Aff1	99	76.835	Mesocricetus_auratus
MGP_PahariEiJ_G0017247	Aff1	68	45.070	ENSMAUG00000013669	Aff4	95	45.070	Mesocricetus_auratus
MGP_PahariEiJ_G0017247	Aff1	91	53.641	ENSMICG00000028855	-	85	54.248	Microcebus_murinus
MGP_PahariEiJ_G0017247	Aff1	99	75.590	ENSMOCG00000017389	Aff1	99	77.380	Microtus_ochrogaster
MGP_PahariEiJ_G0017247	Aff1	70	56.198	ENSMMOG00000013763	aff4	51	56.140	Mola_mola
MGP_PahariEiJ_G0017247	Aff1	99	50.801	ENSMODG00000020745	AFF1	97	50.598	Monodelphis_domestica
MGP_PahariEiJ_G0017247	Aff1	63	63.636	ENSMALG00000017690	aff4	67	64.615	Monopterus_albus
MGP_PahariEiJ_G0017247	Aff1	100	93.197	MGP_CAROLIEiJ_G0027469	Aff1	100	92.056	Mus_caroli
MGP_PahariEiJ_G0017247	Aff1	100	94.417	ENSMUSG00000029313	Aff1	100	94.007	Mus_musculus
MGP_PahariEiJ_G0017247	Aff1	100	93.924	MGP_SPRETEiJ_G0028466	Aff1	100	92.118	Mus_spretus
MGP_PahariEiJ_G0017247	Aff1	100	66.216	ENSMPUG00000002270	AFF1	99	65.978	Mustela_putorius_furo
MGP_PahariEiJ_G0017247	Aff1	99	66.693	ENSMLUG00000000293	AFF1	100	65.946	Myotis_lucifugus
MGP_PahariEiJ_G0017247	Aff1	99	66.506	ENSNLEG00000009429	AFF1	99	67.820	Nomascus_leucogenys
MGP_PahariEiJ_G0017247	Aff1	99	62.960	ENSOPRG00000017154	-	99	63.192	Ochotona_princeps
MGP_PahariEiJ_G0017247	Aff1	93	64.667	ENSODEG00000007407	AFF1	98	77.686	Octodon_degus
MGP_PahariEiJ_G0017247	Aff1	100	50.321	ENSOANG00000013624	AFF1	100	51.520	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017247	Aff1	55	44.403	ENSOANG00000001095	-	73	48.519	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017247	Aff1	99	64.952	ENSOCUG00000002105	AFF1	96	65.648	Oryctolagus_cuniculus
MGP_PahariEiJ_G0017247	Aff1	63	63.158	ENSOMEG00000005799	-	74	63.158	Oryzias_melastigma
MGP_PahariEiJ_G0017247	Aff1	99	60.526	ENSOGAG00000009622	-	99	61.329	Otolemur_garnettii
MGP_PahariEiJ_G0017247	Aff1	72	52.477	ENSOGAG00000031211	-	99	53.206	Otolemur_garnettii
MGP_PahariEiJ_G0017247	Aff1	99	66.400	ENSOARG00000004522	AFF1	100	66.613	Ovis_aries
MGP_PahariEiJ_G0017247	Aff1	100	69.719	ENSPPAG00000029196	AFF1	100	69.743	Pan_paniscus
MGP_PahariEiJ_G0017247	Aff1	99	63.563	ENSPPRG00000023590	AFF1	99	64.205	Panthera_pardus
MGP_PahariEiJ_G0017247	Aff1	82	66.102	ENSPTIG00000011838	AFF1	99	66.937	Panthera_tigris_altaica
MGP_PahariEiJ_G0017247	Aff1	100	69.639	ENSPTRG00000016255	AFF1	99	76.596	Pan_troglodytes
MGP_PahariEiJ_G0017247	Aff1	98	67.264	ENSPANG00000016722	AFF1	99	68.699	Papio_anubis
MGP_PahariEiJ_G0017247	Aff1	83	35.345	ENSPKIG00000024249	AFF4	51	36.933	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0017247	Aff1	68	37.255	ENSPSIG00000013003	AFF4	78	34.979	Pelodiscus_sinensis
MGP_PahariEiJ_G0017247	Aff1	100	50.000	ENSPSIG00000003759	AFF1	100	48.813	Pelodiscus_sinensis
MGP_PahariEiJ_G0017247	Aff1	100	78.829	ENSPEMG00000000785	Aff1	100	78.785	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017247	Aff1	68	38.158	ENSPCIG00000000197	AFF4	78	35.553	Phascolarctos_cinereus
MGP_PahariEiJ_G0017247	Aff1	93	82.143	ENSPCIG00000011395	AFF1	91	82.143	Phascolarctos_cinereus
MGP_PahariEiJ_G0017247	Aff1	52	63.333	ENSPFOG00000004581	-	58	63.333	Poecilia_formosa
MGP_PahariEiJ_G0017247	Aff1	70	51.163	ENSPLAG00000005101	aff2	58	49.194	Poecilia_latipinna
MGP_PahariEiJ_G0017247	Aff1	100	68.463	ENSPPYG00000014910	AFF1	100	68.971	Pongo_abelii
MGP_PahariEiJ_G0017247	Aff1	76	89.130	ENSPCAG00000005658	AFF1	72	89.130	Procavia_capensis
MGP_PahariEiJ_G0017247	Aff1	97	63.227	ENSPCOG00000027339	AFF1	97	63.249	Propithecus_coquereli
MGP_PahariEiJ_G0017247	Aff1	95	65.632	ENSPVAG00000014455	AFF1	96	65.203	Pteropus_vampyrus
MGP_PahariEiJ_G0017247	Aff1	60	37.638	ENSPNYG00000014804	aff4	79	35.497	Pundamilia_nyererei
MGP_PahariEiJ_G0017247	Aff1	65	41.284	ENSPNAG00000004777	aff4	70	40.556	Pygocentrus_nattereri
MGP_PahariEiJ_G0017247	Aff1	99	84.452	ENSRNOG00000002232	Aff1	99	84.370	Rattus_norvegicus
MGP_PahariEiJ_G0017247	Aff1	100	70.616	ENSRBIG00000032242	AFF1	100	70.777	Rhinopithecus_bieti
MGP_PahariEiJ_G0017247	Aff1	95	75.381	ENSRROG00000045716	AFF1	98	75.510	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017247	Aff1	100	68.539	ENSSBOG00000035401	AFF1	99	72.449	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017247	Aff1	99	50.561	ENSSHAG00000004203	AFF1	99	50.120	Sarcophilus_harrisii
MGP_PahariEiJ_G0017247	Aff1	81	37.290	ENSSHAG00000013198	AFF4	78	36.467	Sarcophilus_harrisii
MGP_PahariEiJ_G0017247	Aff1	60	33.555	ENSSFOG00015000846	AFF4	62	37.317	Scleropages_formosus
MGP_PahariEiJ_G0017247	Aff1	86	63.889	ENSSMAG00000004734	aff4	53	47.967	Scophthalmus_maximus
MGP_PahariEiJ_G0017247	Aff1	78	36.917	ENSSDUG00000019498	aff4	52	36.834	Seriola_dumerili
MGP_PahariEiJ_G0017247	Aff1	78	36.917	ENSSLDG00000007683	aff4	52	36.834	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0017247	Aff1	63	52.522	ENSSARG00000013296	-	78	51.335	Sorex_araneus
MGP_PahariEiJ_G0017247	Aff1	59	30.809	ENSSPUG00000009604	AFF3	59	33.402	Sphenodon_punctatus
MGP_PahariEiJ_G0017247	Aff1	99	49.161	ENSSPUG00000001574	AFF1	99	48.765	Sphenodon_punctatus
MGP_PahariEiJ_G0017247	Aff1	66	34.648	ENSSPAG00000012370	aff4	60	36.756	Stegastes_partitus
MGP_PahariEiJ_G0017247	Aff1	59	62.055	ENSSSCG00000023593	AFF1	100	63.384	Sus_scrofa
MGP_PahariEiJ_G0017247	Aff1	53	32.712	ENSTGUG00000010075	-	71	34.615	Taeniopygia_guttata
MGP_PahariEiJ_G0017247	Aff1	70	48.000	ENSTGUG00000004690	AFF2	50	52.273	Taeniopygia_guttata
MGP_PahariEiJ_G0017247	Aff1	99	43.725	ENSTGUG00000002726	AFF1	82	44.046	Taeniopygia_guttata
MGP_PahariEiJ_G0017247	Aff1	78	37.323	ENSTRUG00000008087	aff4	78	36.188	Takifugu_rubripes
MGP_PahariEiJ_G0017247	Aff1	84	59.722	ENSTNIG00000018201	aff4	89	48.148	Tetraodon_nigroviridis
MGP_PahariEiJ_G0017247	Aff1	99	67.015	ENSTBEG00000007536	AFF1	100	67.498	Tupaia_belangeri
MGP_PahariEiJ_G0017247	Aff1	96	62.412	ENSTTRG00000005595	AFF1	100	66.159	Tursiops_truncatus
MGP_PahariEiJ_G0017247	Aff1	96	64.079	ENSUAMG00000001919	AFF1	99	64.300	Ursus_americanus
MGP_PahariEiJ_G0017247	Aff1	81	66.667	ENSUMAG00000025433	AFF1	86	67.336	Ursus_maritimus
MGP_PahariEiJ_G0017247	Aff1	99	66.185	ENSVVUG00000009263	AFF1	99	66.373	Vulpes_vulpes
MGP_PahariEiJ_G0017247	Aff1	77	46.324	ENSXETG00000019630	aff2	73	46.324	Xenopus_tropicalis
MGP_PahariEiJ_G0017247	Aff1	60	34.274	ENSXCOG00000006385	aff4	54	38.585	Xiphophorus_couchianus
MGP_PahariEiJ_G0017247	Aff1	84	62.687	ENSXMAG00000001642	aff4	85	62.687	Xiphophorus_maculatus