EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017441 (Gene tree)
Gene ID: 110331387
Gene Symbol: Zfp354a
Alias: Tcf17|kid1
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 14690 bases
Position: chr14:19278660-19293349
Accession: 110331387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	1	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	2	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	3	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	4	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	5	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	6	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	7	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	8	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	9	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	10	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	11	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	12	13
MGP_PahariEiJ_P0033271	zf-C2H2	PF00096.26	3.5e-67	13	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	1	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	2	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	3	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	4	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	5	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	6	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	7	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	8	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	9	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	10	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	11	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	12	13
MGP_PahariEiJ_P0033274	zf-C2H2	PF00096.26	3.6e-67	13	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	1	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	2	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	3	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	4	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	5	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	6	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	7	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	8	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	9	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	10	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	11	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	12	13
MGP_PahariEiJ_P0033273	zf-C2H2	PF00096.26	3.8e-67	13	13
MGP_PahariEiJ_P0033271	zf-met	PF12874.7	2.5e-06	1	1
MGP_PahariEiJ_P0033274	zf-met	PF12874.7	2.6e-06	1	1
MGP_PahariEiJ_P0033273	zf-met	PF12874.7	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0033271	-	2598	XM_021211909	MGP_PahariEiJ_P0033271	572 (aa)	XP_021067568	UPI000A30E1DF
MGP_PahariEiJ_T0033272	-	432	-	-	- (aa)	-	-
MGP_PahariEiJ_T0033273	-	3913	-	MGP_PahariEiJ_P0033273	575 (aa)	-	-
MGP_PahariEiJ_T0033274	-	2082	-	MGP_PahariEiJ_P0033274	573 (aa)	XP_021067567	UPI000A3073B8

Gene Model

Click here to download MGP_PahariEiJ_G0017441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0017441	Zfp354a	69	48.819	MGP_PahariEiJ_G0017280	Gfi1	100	48.819
MGP_PahariEiJ_G0017441	Zfp354a	98	54.260	MGP_PahariEiJ_G0025706	Zfp661	95	54.260
MGP_PahariEiJ_G0017441	Zfp354a	100	48.421	MGP_PahariEiJ_G0023460	Zfp945	98	48.421
MGP_PahariEiJ_G0017441	Zfp354a	97	49.114	MGP_PahariEiJ_G0015756	Zfp748	99	49.706
MGP_PahariEiJ_G0017441	Zfp354a	98	44.675	MGP_PahariEiJ_G0017548	Zfp39	92	46.667
MGP_PahariEiJ_G0017441	Zfp354a	70	37.135	MGP_PahariEiJ_G0022097	Repin1	93	35.602
MGP_PahariEiJ_G0017441	Zfp354a	76	54.310	MGP_PahariEiJ_G0022533	Zfp637	86	54.310
MGP_PahariEiJ_G0017441	Zfp354a	73	39.437	MGP_PahariEiJ_G0021209	Zfp574	93	41.667
MGP_PahariEiJ_G0017441	Zfp354a	98	47.967	MGP_PahariEiJ_G0017567	Zfp867	82	48.963
MGP_PahariEiJ_G0017441	Zfp354a	99	51.781	MGP_PahariEiJ_G0021177	Zfp108	99	51.781
MGP_PahariEiJ_G0017441	Zfp354a	98	48.411	MGP_PahariEiJ_G0021172	Zfp112	97	48.551
MGP_PahariEiJ_G0017441	Zfp354a	98	49.188	MGP_PahariEiJ_G0021173	Zfp235	99	45.585
MGP_PahariEiJ_G0017441	Zfp354a	75	53.994	MGP_PahariEiJ_G0021178	Zfp93	99	53.994
MGP_PahariEiJ_G0017441	Zfp354a	87	48.148	MGP_PahariEiJ_G0019173	Zfp236	62	48.148
MGP_PahariEiJ_G0017441	Zfp354a	69	51.394	MGP_PahariEiJ_G0013707	Zfp768	52	49.164
MGP_PahariEiJ_G0017441	Zfp354a	100	48.374	MGP_PahariEiJ_G0013708	-	92	48.374
MGP_PahariEiJ_G0017441	Zfp354a	100	48.374	MGP_PahariEiJ_G0013709	-	92	48.374
MGP_PahariEiJ_G0017441	Zfp354a	69	49.738	MGP_PahariEiJ_G0021003	Zfp628	62	48.810
MGP_PahariEiJ_G0017441	Zfp354a	100	76.768	MGP_PahariEiJ_G0017434	Zfp354b	99	76.768
MGP_PahariEiJ_G0017441	Zfp354a	69	46.377	MGP_PahariEiJ_G0022203	Prdm5	85	36.293
MGP_PahariEiJ_G0017441	Zfp354a	70	38.547	MGP_PahariEiJ_G0023018	Zfp319	93	37.778
MGP_PahariEiJ_G0017441	Zfp354a	70	57.179	MGP_PahariEiJ_G0012724	Zfp420	99	56.675
MGP_PahariEiJ_G0017441	Zfp354a	68	44.068	MGP_PahariEiJ_G0022625	Zfp384	52	43.750
MGP_PahariEiJ_G0017441	Zfp354a	70	47.458	MGP_PahariEiJ_G0021011	-	82	33.051
MGP_PahariEiJ_G0017441	Zfp354a	75	47.458	MGP_PahariEiJ_G0021012	-	66	32.051
MGP_PahariEiJ_G0017441	Zfp354a	69	42.308	MGP_PahariEiJ_G0026165	Zfp64	70	34.934
MGP_PahariEiJ_G0017441	Zfp354a	74	46.698	MGP_PahariEiJ_G0016960	Zbtb49	66	47.222
MGP_PahariEiJ_G0017441	Zfp354a	98	47.301	MGP_PahariEiJ_G0012663	-	98	47.301
MGP_PahariEiJ_G0017441	Zfp354a	98	50.407	MGP_PahariEiJ_G0023447	Zfp51	94	50.000
MGP_PahariEiJ_G0017441	Zfp354a	98	49.722	MGP_PahariEiJ_G0021180	Zfp94	94	47.207
MGP_PahariEiJ_G0017441	Zfp354a	69	52.083	MGP_PahariEiJ_G0019324	Zkscan4	53	52.083
MGP_PahariEiJ_G0017441	Zfp354a	69	44.248	MGP_PahariEiJ_G0029075	Zbtb17	56	41.226
MGP_PahariEiJ_G0017441	Zfp354a	98	48.837	MGP_PahariEiJ_G0021668	Zfp882	99	48.837
MGP_PahariEiJ_G0017441	Zfp354a	98	43.023	MGP_PahariEiJ_G0019959	Zfp251	95	48.324
MGP_PahariEiJ_G0017441	Zfp354a	84	53.061	MGP_PahariEiJ_G0012839	-	69	53.061
MGP_PahariEiJ_G0017441	Zfp354a	98	49.373	MGP_PahariEiJ_G0015741	Zfp759	99	49.373
MGP_PahariEiJ_G0017441	Zfp354a	98	55.652	MGP_PahariEiJ_G0023178	Zfp1	99	47.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017441	Zfp354a	99	83.860	ENSCAFG00020003589	-	99	83.860	Canis_lupus_dingo
MGP_PahariEiJ_G0017441	Zfp354a	100	77.355	ENSTSYG00000008405	-	100	77.355	Carlito_syrichta
MGP_PahariEiJ_G0017441	Zfp354a	98	79.292	ENSCAPG00000013118	-	98	79.292	Cavia_aperea
MGP_PahariEiJ_G0017441	Zfp354a	99	82.404	ENSCPOG00000034791	-	99	82.601	Cavia_porcellus
MGP_PahariEiJ_G0017441	Zfp354a	97	81.495	ENSCLAG00000014648	-	100	81.495	Chinchilla_lanigera
MGP_PahariEiJ_G0017441	Zfp354a	76	94.704	ENSCHOG00000003898	-	100	94.704	Choloepus_hoffmanni
MGP_PahariEiJ_G0017441	Zfp354a	91	81.146	ENSCHOG00000008173	-	91	81.146	Choloepus_hoffmanni
MGP_PahariEiJ_G0017441	Zfp354a	100	90.862	ENSCGRG00001021088	Zfp354a	100	90.862	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017441	Zfp354a	100	90.862	ENSCGRG00000015037	Zfp354a	100	90.862	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017441	Zfp354a	76	95.619	ENSDNOG00000043806	-	100	95.619	Dasypus_novemcinctus
MGP_PahariEiJ_G0017441	Zfp354a	99	84.211	ENSDORG00000009396	Zfp354a	100	83.966	Dipodomys_ordii
MGP_PahariEiJ_G0017441	Zfp354a	84	78.004	ENSETEG00000020249	-	99	78.004	Echinops_telfairi
MGP_PahariEiJ_G0017441	Zfp354a	84	79.191	ENSEEUG00000008362	-	99	79.191	Erinaceus_europaeus
MGP_PahariEiJ_G0017441	Zfp354a	99	82.487	ENSFDAG00000015190	-	99	83.186	Fukomys_damarensis
MGP_PahariEiJ_G0017441	Zfp354a	98	82.238	ENSHGLG00000005975	-	98	82.238	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017441	Zfp354a	84	83.162	ENSHGLG00100012284	-	99	83.162	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017441	Zfp354a	84	85.366	ENSSTOG00000024118	-	96	85.366	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017441	Zfp354a	84	79.960	ENSLAFG00000002909	-	100	79.960	Loxodonta_africana
MGP_PahariEiJ_G0017441	Zfp354a	85	91.313	ENSMAUG00000000735	Zfp354a	93	91.313	Mesocricetus_auratus
MGP_PahariEiJ_G0017441	Zfp354a	99	79.636	ENSMICG00000006390	ZNF354A	100	79.636	Microcebus_murinus
MGP_PahariEiJ_G0017441	Zfp354a	98	90.334	ENSMOCG00000003692	Zfp354a	98	90.334	Microtus_ochrogaster
MGP_PahariEiJ_G0017441	Zfp354a	100	96.161	MGP_CAROLIEiJ_G0016306	Zfp354a	100	96.161	Mus_caroli
MGP_PahariEiJ_G0017441	Zfp354a	100	96.335	ENSMUSG00000020364	Zfp354a	100	96.335	Mus_musculus
MGP_PahariEiJ_G0017441	Zfp354a	99	84.991	ENSNGAG00000011769	Zfp354a	100	84.991	Nannospalax_galili
MGP_PahariEiJ_G0017441	Zfp354a	90	82.819	ENSODEG00000008278	-	100	82.819	Octodon_degus
MGP_PahariEiJ_G0017441	Zfp354a	98	82.492	ENSPPAG00000039371	ZNF354A	100	82.492	Pan_paniscus
MGP_PahariEiJ_G0017441	Zfp354a	84	82.913	ENSPTRG00000017606	ZNF354A	99	78.598	Pan_troglodytes
MGP_PahariEiJ_G0017441	Zfp354a	100	89.310	ENSPEMG00000024167	Zfp354a	100	89.310	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017441	Zfp354a	85	84.867	ENSUAMG00000000212	-	90	84.867	Ursus_americanus