EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017457 (Gene tree)
Gene ID: 110331571
Gene Symbol: Cdkl3
Alias: B230379H01Rik
Full Name: cyclin dependent kinase like 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 85190 bases
Position: chr14:20141836-20227025
Accession: 110331571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0033340	RIO1	PF01163.22	4.2e-05	1	1
MGP_PahariEiJ_P0033338	RIO1	PF01163.22	0.00026	1	1
MGP_PahariEiJ_P0033337	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033344	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033333	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033339	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033335	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033336	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033343	RIO1	PF01163.22	0.00034	1	1
MGP_PahariEiJ_P0033334	RIO1	PF01163.22	0.00036	1	1
MGP_PahariEiJ_P0033342	RIO1	PF01163.22	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0033339	-	2009	-	MGP_PahariEiJ_P0033339	581 (aa)	-	-
MGP_PahariEiJ_T0033338	-	2073	XM_021212302	MGP_PahariEiJ_P0033338	457 (aa)	XP_021067961	UPI000A30733B
MGP_PahariEiJ_T0033335	-	2064	-	MGP_PahariEiJ_P0033335	585 (aa)	-	UPI000A313422
MGP_PahariEiJ_T0033334	-	2752	XM_021212300	MGP_PahariEiJ_P0033334	595 (aa)	XP_021067959	UPI000A30E7EC
MGP_PahariEiJ_T0033337	-	2736	XM_021212299	MGP_PahariEiJ_P0033337	610 (aa)	XP_021067958	UPI000A30D35A
MGP_PahariEiJ_T0033336	-	2392	XM_021212301	MGP_PahariEiJ_P0033336	585 (aa)	XP_021067960	UPI000A313422
MGP_PahariEiJ_T0033333	-	2052	-	MGP_PahariEiJ_P0033333	581 (aa)	-	-
MGP_PahariEiJ_T0033348	-	487	-	MGP_PahariEiJ_P0033348	79 (aa)	-	-
MGP_PahariEiJ_T0033349	-	465	-	MGP_PahariEiJ_P0033349	91 (aa)	-	-
MGP_PahariEiJ_T0033344	-	2757	-	MGP_PahariEiJ_P0033344	610 (aa)	-	UPI000A30D35A
MGP_PahariEiJ_T0033345	-	1559	-	MGP_PahariEiJ_P0033345	223 (aa)	-	-
MGP_PahariEiJ_T0033346	-	507	-	MGP_PahariEiJ_P0033346	137 (aa)	-	-
MGP_PahariEiJ_T0033347	-	629	-	MGP_PahariEiJ_P0033347	97 (aa)	-	-
MGP_PahariEiJ_T0033340	-	665	-	MGP_PahariEiJ_P0033340	192 (aa)	-	UPI00015F3B5C
MGP_PahariEiJ_T0033341	-	2762	-	MGP_PahariEiJ_P0033341	590 (aa)	-	-
MGP_PahariEiJ_T0033342	-	2075	-	MGP_PahariEiJ_P0033342	638 (aa)	-	-
MGP_PahariEiJ_T0033343	-	1938	-	MGP_PahariEiJ_P0033343	597 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0017457	Cdkl3	88	33.721	MGP_PahariEiJ_G0014130	Mark2	87	33.721
MGP_PahariEiJ_G0017457	Cdkl3	90	35.556	MGP_PahariEiJ_G0017243	Mapk10	86	37.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017457	Cdkl3	100	94.271	ENSCLAG00000013562	CDKL3	100	94.271	Chinchilla_lanigera
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	ENSCGRG00001024159	Cdkl3	92	98.639	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	ENSCGRG00000008921	Cdkl3	100	99.479	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017457	Cdkl3	100	95.833	ENSDORG00000002519	-	100	95.833	Dipodomys_ordii
MGP_PahariEiJ_G0017457	Cdkl3	100	98.438	ENSFCAG00000024742	CDKL3	100	80.574	Felis_catus
MGP_PahariEiJ_G0017457	Cdkl3	100	92.708	ENSHGLG00000018175	-	97	92.166	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017457	Cdkl3	100	92.708	ENSHGLG00100013066	-	100	92.708	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017457	Cdkl3	100	96.875	ENSJJAG00000000547	-	100	96.875	Jaculus_jaculus
MGP_PahariEiJ_G0017457	Cdkl3	100	96.354	ENSLAFG00000011468	CDKL3	99	82.857	Loxodonta_africana
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	ENSMAUG00000010031	-	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0017457	Cdkl3	100	97.917	ENSMICG00000004579	CDKL3	96	82.320	Microcebus_murinus
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	ENSMOCG00000012243	-	100	100.000	Microtus_ochrogaster
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	MGP_CAROLIEiJ_G0016322	Cdkl3	100	100.000	Mus_caroli
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	ENSMUSG00000020389	Cdkl3	100	100.000	Mus_musculus
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	MGP_SPRETEiJ_G0017166	Cdkl3	100	100.000	Mus_spretus
MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	ENSMPUG00000010119	CDKL3	99	82.689	Mustela_putorius_furo
MGP_PahariEiJ_G0017457	Cdkl3	100	94.792	ENSMLUG00000012902	CDKL3	99	79.089	Myotis_lucifugus
MGP_PahariEiJ_G0017457	Cdkl3	100	96.354	ENSOANG00000000233	CDKL3	100	72.177	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017457	Cdkl3	100	97.917	ENSPPRG00000005837	CDKL3	99	84.989	Panthera_pardus
MGP_PahariEiJ_G0017457	Cdkl3	100	97.917	ENSPTIG00000019406	CDKL3	99	83.275	Panthera_tigris_altaica
MGP_PahariEiJ_G0017457	Cdkl3	100	100.000	ENSPEMG00000021980	-	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017457	Cdkl3	100	98.958	ENSPVAG00000012429	CDKL3	99	78.921	Pteropus_vampyrus
MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	ENSRNOG00000054806	LOC108348323	100	94.305	Rattus_norvegicus
MGP_PahariEiJ_G0017457	Cdkl3	100	99.479	ENSRNOG00000059485	Cdkl3	100	95.462	Rattus_norvegicus