EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017548 (Gene tree)
Gene ID: -
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 17304 bases
Position: chr14:26908018-26925321
Accession: 99183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	1	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	2	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	3	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	4	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	5	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	6	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	7	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	8	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	9	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	10	11
MGP_PahariEiJ_P0033638	zf-C2H2	PF00096.26	1.6e-56	11	11
MGP_PahariEiJ_P0033638	zf-met	PF12874.7	1.9e-12	1	2
MGP_PahariEiJ_P0033638	zf-met	PF12874.7	1.9e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0033638	-	3858	-	MGP_PahariEiJ_P0033638	717 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0017548	Zfp39	70	50.000	MGP_PahariEiJ_G0015756	Zfp748	99	50.000
MGP_PahariEiJ_G0017548	Zfp39	69	40.728	MGP_PahariEiJ_G0022203	Prdm5	82	40.728
MGP_PahariEiJ_G0017548	Zfp39	61	42.478	MGP_PahariEiJ_G0019173	Zfp236	68	42.478
MGP_PahariEiJ_G0017548	Zfp39	59	31.757	MGP_PahariEiJ_G0021209	Zfp574	71	32.283
MGP_PahariEiJ_G0017548	Zfp39	73	45.122	MGP_PahariEiJ_G0013708	-	76	45.122
MGP_PahariEiJ_G0017548	Zfp39	59	53.153	MGP_PahariEiJ_G0013707	Zfp768	57	51.042
MGP_PahariEiJ_G0017548	Zfp39	62	37.647	MGP_PahariEiJ_G0021011	-	79	35.769
MGP_PahariEiJ_G0017548	Zfp39	57	33.962	MGP_PahariEiJ_G0021013	Zfp784	78	35.071
MGP_PahariEiJ_G0017548	Zfp39	60	37.647	MGP_PahariEiJ_G0021012	-	67	30.688
MGP_PahariEiJ_G0017548	Zfp39	58	48.511	MGP_PahariEiJ_G0019324	Zkscan4	52	48.511
MGP_PahariEiJ_G0017548	Zfp39	92	52.964	MGP_PahariEiJ_G0023178	Zfp1	99	52.964
MGP_PahariEiJ_G0017548	Zfp39	57	32.547	MGP_PahariEiJ_G0013693	Maz	58	33.219
MGP_PahariEiJ_G0017548	Zfp39	61	40.256	MGP_PahariEiJ_G0029075	Zbtb17	56	40.256
MGP_PahariEiJ_G0017548	Zfp39	94	46.569	MGP_PahariEiJ_G0023460	Zfp945	98	46.636
MGP_PahariEiJ_G0017548	Zfp39	92	50.000	MGP_PahariEiJ_G0021180	Zfp94	97	50.000
MGP_PahariEiJ_G0017548	Zfp39	92	46.667	MGP_PahariEiJ_G0017441	Zfp354a	98	44.675
MGP_PahariEiJ_G0017548	Zfp39	70	49.206	MGP_PahariEiJ_G0012839	-	71	49.206
MGP_PahariEiJ_G0017548	Zfp39	70	56.612	MGP_PahariEiJ_G0025706	Zfp661	74	56.612
MGP_PahariEiJ_G0017548	Zfp39	72	41.822	MGP_PahariEiJ_G0021668	Zfp882	99	40.090
MGP_PahariEiJ_G0017548	Zfp39	92	47.678	MGP_PahariEiJ_G0017434	Zfp354b	98	47.678
MGP_PahariEiJ_G0017548	Zfp39	60	36.269	MGP_PahariEiJ_G0022097	Repin1	92	36.264
MGP_PahariEiJ_G0017548	Zfp39	62	55.172	MGP_PahariEiJ_G0022533	Zfp637	81	50.777
MGP_PahariEiJ_G0017548	Zfp39	62	52.941	MGP_PahariEiJ_G0012724	Zfp420	99	52.941
MGP_PahariEiJ_G0017548	Zfp39	64	46.260	MGP_PahariEiJ_G0021178	Zfp93	99	51.304
MGP_PahariEiJ_G0017548	Zfp39	92	42.857	MGP_PahariEiJ_G0021177	Zfp108	99	44.326
MGP_PahariEiJ_G0017548	Zfp39	92	49.541	MGP_PahariEiJ_G0021172	Zfp112	99	49.541
MGP_PahariEiJ_G0017548	Zfp39	92	46.429	MGP_PahariEiJ_G0021173	Zfp235	99	46.429
MGP_PahariEiJ_G0017548	Zfp39	92	49.254	MGP_PahariEiJ_G0017567	Zfp867	95	49.254
MGP_PahariEiJ_G0017548	Zfp39	70	53.922	MGP_PahariEiJ_G0019959	Zfp251	70	53.922
MGP_PahariEiJ_G0017548	Zfp39	92	40.806	MGP_PahariEiJ_G0015741	Zfp759	99	40.806
MGP_PahariEiJ_G0017548	Zfp39	59	35.331	MGP_PahariEiJ_G0023018	Zfp319	87	35.110
MGP_PahariEiJ_G0017548	Zfp39	92	48.052	MGP_PahariEiJ_G0012663	-	96	48.052
MGP_PahariEiJ_G0017548	Zfp39	73	45.122	MGP_PahariEiJ_G0013709	-	76	45.122
MGP_PahariEiJ_G0017548	Zfp39	58	44.030	MGP_PahariEiJ_G0017280	Gfi1	100	44.030
MGP_PahariEiJ_G0017548	Zfp39	62	45.876	MGP_PahariEiJ_G0016960	Zbtb49	73	46.575
MGP_PahariEiJ_G0017548	Zfp39	64	45.745	MGP_PahariEiJ_G0026165	Zfp64	74	45.745
MGP_PahariEiJ_G0017548	Zfp39	93	45.972	MGP_PahariEiJ_G0023447	Zfp51	94	45.972
MGP_PahariEiJ_G0017548	Zfp39	59	48.077	MGP_PahariEiJ_G0021003	Zfp628	60	48.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017548	Zfp39	92	59.607	ENSCPOG00000036704	-	99	59.607	Cavia_porcellus
MGP_PahariEiJ_G0017548	Zfp39	99	81.006	ENSCGRG00001002406	Zfp39	100	81.006	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017548	Zfp39	99	81.006	ENSCGRG00000002730	Zfp39	100	81.006	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017548	Zfp39	99	69.382	ENSJJAG00000018925	Zfp39	99	69.382	Jaculus_jaculus
MGP_PahariEiJ_G0017548	Zfp39	99	81.805	ENSMAUG00000001536	Zfp39	99	81.805	Mesocricetus_auratus
MGP_PahariEiJ_G0017548	Zfp39	99	76.783	ENSMOCG00000017961	Zfp39	96	78.940	Microtus_ochrogaster
MGP_PahariEiJ_G0017548	Zfp39	100	69.777	ENSNGAG00000019853	Zfp39	99	69.777	Nannospalax_galili
MGP_PahariEiJ_G0017548	Zfp39	59	76.000	ENSODEG00000000805	-	100	76.000	Octodon_degus
MGP_PahariEiJ_G0017548	Zfp39	99	82.657	ENSPEMG00000009428	Zfp39	99	82.657	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017548	Zfp39	100	81.869	ENSRNOG00000014712	Zfp39	100	81.869	Rattus_norvegicus