EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017864 (Gene tree)
Gene ID: 110331442
Gene Symbol: Tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 11995 bases
Position: chr14:42636235-42648229
Accession: 110331442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0034938	AARP2CN	PF08142.12	2.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0034937	-	1549	-	MGP_PahariEiJ_P0034937	65 (aa)	-	-
MGP_PahariEiJ_T0034938	-	3421	-	MGP_PahariEiJ_P0034938	803 (aa)	XP_021067696	UPI000A30F81B
MGP_PahariEiJ_T0034939	-	1366	-	-	- (aa)	-	-
MGP_PahariEiJ_T0034943	-	772	-	-	- (aa)	-	-
MGP_PahariEiJ_T0034942	-	708	-	MGP_PahariEiJ_P0034942	40 (aa)	-	-
MGP_PahariEiJ_T0034941	-	534	-	-	- (aa)	-	-
MGP_PahariEiJ_T0034940	-	2351	-	MGP_PahariEiJ_P0034940	90 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017864	Tsr1	100	85.466	ENSG00000167721	TSR1	100	85.590	Homo_sapiens
MGP_PahariEiJ_G0017864	Tsr1	99	54.916	ENSAPOG00000020891	tsr1	99	56.438	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0017864	Tsr1	100	85.504	ENSAMEG00000007599	TSR1	99	85.504	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017864	Tsr1	99	56.667	ENSACIG00000007090	tsr1	99	56.740	Amphilophus_citrinellus
MGP_PahariEiJ_G0017864	Tsr1	99	54.578	ENSAOCG00000023284	tsr1	99	55.865	Amphiprion_ocellaris
MGP_PahariEiJ_G0017864	Tsr1	94	55.499	ENSAPEG00000008452	tsr1	100	56.868	Amphiprion_percula
MGP_PahariEiJ_G0017864	Tsr1	99	54.665	ENSATEG00000021961	tsr1	99	55.582	Anabas_testudineus
MGP_PahariEiJ_G0017864	Tsr1	92	69.448	ENSAPLG00000013422	TSR1	100	69.314	Anas_platyrhynchos
MGP_PahariEiJ_G0017864	Tsr1	70	56.944	ENSACAG00000000859	TSR1	92	57.712	Anolis_carolinensis
MGP_PahariEiJ_G0017864	Tsr1	100	86.924	ENSANAG00000031071	TSR1	100	86.924	Aotus_nancymaae
MGP_PahariEiJ_G0017864	Tsr1	99	55.569	ENSACLG00000007595	tsr1	99	55.865	Astatotilapia_calliptera
MGP_PahariEiJ_G0017864	Tsr1	50	49.880	ENSAMXG00000008470	tsr1	90	49.535	Astyanax_mexicanus
MGP_PahariEiJ_G0017864	Tsr1	100	87.811	ENSBTAG00000004225	TSR1	100	88.308	Bos_taurus
MGP_PahariEiJ_G0017864	Tsr1	97	39.245	WBGene00006497	tag-151	96	40.025	Caenorhabditis_elegans
MGP_PahariEiJ_G0017864	Tsr1	100	86.177	ENSCJAG00000012456	TSR1	100	86.177	Callithrix_jacchus
MGP_PahariEiJ_G0017864	Tsr1	100	85.217	ENSCAFG00000002106	-	100	85.590	Canis_familiaris
MGP_PahariEiJ_G0017864	Tsr1	90	84.711	ENSCAFG00000019273	-	100	86.758	Canis_familiaris
MGP_PahariEiJ_G0017864	Tsr1	100	85.112	ENSCAFG00020009728	TSR1	100	85.484	Canis_lupus_dingo
MGP_PahariEiJ_G0017864	Tsr1	100	88.060	ENSCHIG00000023935	TSR1	100	88.557	Capra_hircus
MGP_PahariEiJ_G0017864	Tsr1	100	86.177	ENSTSYG00000005468	TSR1	100	86.177	Carlito_syrichta
MGP_PahariEiJ_G0017864	Tsr1	93	85.791	ENSCPOG00000014833	TSR1	99	86.059	Cavia_porcellus
MGP_PahariEiJ_G0017864	Tsr1	93	86.846	ENSCCAG00000028962	TSR1	98	86.846	Cebus_capucinus
MGP_PahariEiJ_G0017864	Tsr1	100	85.963	ENSCATG00000044262	TSR1	100	85.963	Cercocebus_atys
MGP_PahariEiJ_G0017864	Tsr1	100	86.177	ENSCLAG00000005567	TSR1	100	86.177	Chinchilla_lanigera
MGP_PahariEiJ_G0017864	Tsr1	100	86.087	ENSCSAG00000013788	TSR1	100	86.087	Chlorocebus_sabaeus
MGP_PahariEiJ_G0017864	Tsr1	99	68.914	ENSCPBG00000020363	TSR1	97	69.059	Chrysemys_picta_bellii
MGP_PahariEiJ_G0017864	Tsr1	97	45.190	ENSCING00000020658	-	99	45.190	Ciona_intestinalis
MGP_PahariEiJ_G0017864	Tsr1	97	44.472	ENSCSAVG00000001875	-	100	44.236	Ciona_savignyi
MGP_PahariEiJ_G0017864	Tsr1	100	76.114	ENSCANG00000033056	TSR1	100	76.114	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017864	Tsr1	100	92.040	ENSCGRG00001023942	Tsr1	100	91.791	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017864	Tsr1	100	83.935	ENSCGRG00000013015	Tsr1	100	86.052	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017864	Tsr1	99	54.172	ENSCSEG00000013009	tsr1	99	54.897	Cynoglossus_semilaevis
MGP_PahariEiJ_G0017864	Tsr1	99	55.556	ENSCVAG00000000506	tsr1	99	56.189	Cyprinodon_variegatus
MGP_PahariEiJ_G0017864	Tsr1	99	54.279	ENSDARG00000007744	tsr1	99	55.134	Danio_rerio
MGP_PahariEiJ_G0017864	Tsr1	100	84.807	ENSDNOG00000004715	TSR1	100	86.197	Dasypus_novemcinctus
MGP_PahariEiJ_G0017864	Tsr1	97	74.807	ENSDORG00000023234	-	100	74.422	Dipodomys_ordii
MGP_PahariEiJ_G0017864	Tsr1	100	85.697	ENSDORG00000016371	-	100	85.697	Dipodomys_ordii
MGP_PahariEiJ_G0017864	Tsr1	97	43.052	FBgn0037073	Tsr1	96	43.797	Drosophila_melanogaster
MGP_PahariEiJ_G0017864	Tsr1	92	88.525	ENSETEG00000017534	TSR1	92	88.525	Echinops_telfairi
MGP_PahariEiJ_G0017864	Tsr1	96	52.124	ENSEBUG00000013731	TSR1	98	52.124	Eptatretus_burgeri
MGP_PahariEiJ_G0017864	Tsr1	100	86.443	ENSEASG00005009302	TSR1	97	86.940	Equus_asinus_asinus
MGP_PahariEiJ_G0017864	Tsr1	100	86.194	ENSECAG00000009114	TSR1	100	86.692	Equus_caballus
MGP_PahariEiJ_G0017864	Tsr1	99	54.197	ENSELUG00000020984	tsr1	95	54.414	Esox_lucius
MGP_PahariEiJ_G0017864	Tsr1	100	85.572	ENSFCAG00000006313	TSR1	100	85.697	Felis_catus
MGP_PahariEiJ_G0017864	Tsr1	99	68.642	ENSFALG00000006532	TSR1	99	69.259	Ficedula_albicollis
MGP_PahariEiJ_G0017864	Tsr1	100	85.928	ENSFDAG00000006038	TSR1	100	85.679	Fukomys_damarensis
MGP_PahariEiJ_G0017864	Tsr1	99	54.371	ENSFHEG00000003626	tsr1	99	55.449	Fundulus_heteroclitus
MGP_PahariEiJ_G0017864	Tsr1	99	52.934	ENSGMOG00000010336	tsr1	99	54.024	Gadus_morhua
MGP_PahariEiJ_G0017864	Tsr1	99	54.337	ENSGAFG00000012993	tsr1	99	54.655	Gambusia_affinis
MGP_PahariEiJ_G0017864	Tsr1	99	53.988	ENSGACG00000010843	tsr1	99	54.823	Gasterosteus_aculeatus
MGP_PahariEiJ_G0017864	Tsr1	99	69.134	ENSGAGG00000025619	-	99	68.657	Gopherus_agassizii
MGP_PahariEiJ_G0017864	Tsr1	100	85.839	ENSGGOG00000001704	TSR1	100	85.963	Gorilla_gorilla
MGP_PahariEiJ_G0017864	Tsr1	99	55.329	ENSHBUG00000017904	tsr1	100	56.650	Haplochromis_burtoni
MGP_PahariEiJ_G0017864	Tsr1	97	77.091	ENSHGLG00000015688	-	99	77.091	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017864	Tsr1	100	86.443	ENSHGLG00000012806	-	100	86.318	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017864	Tsr1	100	86.443	ENSHGLG00100015392	TSR1	100	86.318	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017864	Tsr1	99	56.877	ENSHCOG00000001432	tsr1	99	56.629	Hippocampus_comes
MGP_PahariEiJ_G0017864	Tsr1	99	54.699	ENSIPUG00000004618	tsr1	99	56.197	Ictalurus_punctatus
MGP_PahariEiJ_G0017864	Tsr1	100	85.608	ENSSTOG00000011819	TSR1	100	86.228	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017864	Tsr1	92	82.361	ENSJJAG00000019505	Tsr1	95	82.361	Jaculus_jaculus
MGP_PahariEiJ_G0017864	Tsr1	99	54.041	ENSKMAG00000005763	tsr1	99	53.874	Kryptolebias_marmoratus
MGP_PahariEiJ_G0017864	Tsr1	99	54.556	ENSLBEG00000021823	tsr1	99	55.355	Labrus_bergylta
MGP_PahariEiJ_G0017864	Tsr1	99	64.128	ENSLACG00000002197	TSR1	99	64.373	Latimeria_chalumnae
MGP_PahariEiJ_G0017864	Tsr1	90	57.526	ENSLOCG00000006491	TSR1	97	58.271	Lepisosteus_oculatus
MGP_PahariEiJ_G0017864	Tsr1	100	86.211	ENSMFAG00000021330	TSR1	100	86.211	Macaca_fascicularis
MGP_PahariEiJ_G0017864	Tsr1	100	85.839	ENSMMUG00000017519	TSR1	100	85.839	Macaca_mulatta
MGP_PahariEiJ_G0017864	Tsr1	100	85.839	ENSMNEG00000031382	TSR1	100	85.839	Macaca_nemestrina
MGP_PahariEiJ_G0017864	Tsr1	100	85.839	ENSMLEG00000036733	TSR1	100	85.839	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017864	Tsr1	99	54.773	ENSMAMG00000017918	tsr1	99	55.210	Mastacembelus_armatus
MGP_PahariEiJ_G0017864	Tsr1	99	55.622	ENSMZEG00005007477	tsr1	99	55.797	Maylandia_zebra
MGP_PahariEiJ_G0017864	Tsr1	99	67.901	ENSMGAG00000005576	TSR1	99	68.272	Meleagris_gallopavo
MGP_PahariEiJ_G0017864	Tsr1	100	87.189	ENSMICG00000012943	TSR1	100	87.313	Microcebus_murinus
MGP_PahariEiJ_G0017864	Tsr1	100	90.299	ENSMOCG00000022764	Tsr1	100	90.920	Microtus_ochrogaster
MGP_PahariEiJ_G0017864	Tsr1	99	54.800	ENSMMOG00000014280	tsr1	99	55.664	Mola_mola
MGP_PahariEiJ_G0017864	Tsr1	100	77.612	ENSMODG00000010658	TSR1	100	77.612	Monodelphis_domestica
MGP_PahariEiJ_G0017864	Tsr1	99	54.862	ENSMALG00000011681	tsr1	99	56.024	Monopterus_albus
MGP_PahariEiJ_G0017864	Tsr1	100	97.136	MGP_CAROLIEiJ_G0016727	Tsr1	100	97.136	Mus_caroli
MGP_PahariEiJ_G0017864	Tsr1	100	97.758	ENSMUSG00000038335	Tsr1	100	97.758	Mus_musculus
MGP_PahariEiJ_G0017864	Tsr1	100	97.758	MGP_SPRETEiJ_G0017570	Tsr1	100	97.758	Mus_spretus
MGP_PahariEiJ_G0017864	Tsr1	82	86.128	ENSMPUG00000013000	TSR1	100	86.585	Mustela_putorius_furo
MGP_PahariEiJ_G0017864	Tsr1	100	87.065	ENSMLUG00000003505	TSR1	100	87.438	Myotis_lucifugus
MGP_PahariEiJ_G0017864	Tsr1	99	55.090	ENSNBRG00000020728	tsr1	99	55.355	Neolamprologus_brichardi
MGP_PahariEiJ_G0017864	Tsr1	100	72.547	ENSMEUG00000015828	TSR1	100	72.716	Notamacropus_eugenii
MGP_PahariEiJ_G0017864	Tsr1	99	56.432	ENSONIG00000013131	tsr1	99	56.258	Oreochromis_niloticus
MGP_PahariEiJ_G0017864	Tsr1	96	72.587	ENSOANG00000008637	TSR1	100	72.329	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017864	Tsr1	100	85.323	ENSOCUG00000014256	TSR1	100	85.697	Oryctolagus_cuniculus
MGP_PahariEiJ_G0017864	Tsr1	99	54.371	ENSORLG00000004926	tsr1	99	55.889	Oryzias_latipes
MGP_PahariEiJ_G0017864	Tsr1	99	54.436	ENSORLG00020008792	tsr1	99	55.836	Oryzias_latipes_hni
MGP_PahariEiJ_G0017864	Tsr1	99	54.251	ENSORLG00015013838	tsr1	99	55.769	Oryzias_latipes_hsok
MGP_PahariEiJ_G0017864	Tsr1	99	54.644	ENSOMEG00000004830	tsr1	99	56.130	Oryzias_melastigma
MGP_PahariEiJ_G0017864	Tsr1	100	85.926	ENSOGAG00000004492	TSR1	100	85.926	Otolemur_garnettii
MGP_PahariEiJ_G0017864	Tsr1	100	88.060	ENSOARG00000015437	TSR1	97	88.557	Ovis_aries
MGP_PahariEiJ_G0017864	Tsr1	100	85.590	ENSPPAG00000036355	TSR1	100	85.714	Pan_paniscus
MGP_PahariEiJ_G0017864	Tsr1	100	85.323	ENSPPRG00000015519	-	100	85.448	Panthera_pardus
MGP_PahariEiJ_G0017864	Tsr1	100	85.572	ENSPTIG00000010608	TSR1	100	85.697	Panthera_tigris_altaica
MGP_PahariEiJ_G0017864	Tsr1	100	85.590	ENSPTRG00000008547	TSR1	100	85.714	Pan_troglodytes
MGP_PahariEiJ_G0017864	Tsr1	100	82.609	ENSPANG00000024463	TSR1	100	82.981	Papio_anubis
MGP_PahariEiJ_G0017864	Tsr1	99	54.568	ENSPKIG00000013972	tsr1	99	54.890	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0017864	Tsr1	88	68.785	ENSPSIG00000018258	TSR1	100	68.503	Pelodiscus_sinensis
MGP_PahariEiJ_G0017864	Tsr1	99	55.966	ENSPMGG00000011577	tsr1	99	57.073	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0017864	Tsr1	100	91.905	ENSPEMG00000018033	Tsr1	100	91.905	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017864	Tsr1	100	77.351	ENSPCIG00000009357	TSR1	98	77.475	Phascolarctos_cinereus
MGP_PahariEiJ_G0017864	Tsr1	99	54.501	ENSPFOG00000004483	TSR1	99	56.121	Poecilia_formosa
MGP_PahariEiJ_G0017864	Tsr1	99	55.296	ENSPLAG00000022320	tsr1	99	55.788	Poecilia_latipinna
MGP_PahariEiJ_G0017864	Tsr1	99	54.012	ENSPMEG00000004577	tsr1	99	55.102	Poecilia_mexicana
MGP_PahariEiJ_G0017864	Tsr1	97	54.703	ENSPREG00000010354	tsr1	95	55.006	Poecilia_reticulata
MGP_PahariEiJ_G0017864	Tsr1	100	78.121	ENSPPYG00000007792	TSR1	100	77.627	Pongo_abelii
MGP_PahariEiJ_G0017864	Tsr1	53	93.023	ENSPCAG00000012973	-	72	93.023	Procavia_capensis
MGP_PahariEiJ_G0017864	Tsr1	100	86.567	ENSPCOG00000017928	TSR1	100	86.692	Propithecus_coquereli
MGP_PahariEiJ_G0017864	Tsr1	100	86.550	ENSPVAG00000002162	TSR1	100	86.550	Pteropus_vampyrus
MGP_PahariEiJ_G0017864	Tsr1	99	55.689	ENSPNYG00000016163	tsr1	99	55.985	Pundamilia_nyererei
MGP_PahariEiJ_G0017864	Tsr1	99	54.286	ENSPNAG00000008659	tsr1	99	54.611	Pygocentrus_nattereri
MGP_PahariEiJ_G0017864	Tsr1	100	93.035	ENSRNOG00000002980	Tsr1	100	94.403	Rattus_norvegicus
MGP_PahariEiJ_G0017864	Tsr1	100	86.087	ENSRBIG00000040016	TSR1	100	86.087	Rhinopithecus_bieti
MGP_PahariEiJ_G0017864	Tsr1	100	86.087	ENSRROG00000030361	TSR1	100	86.087	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017864	Tsr1	96	31.488	YDL060W	-	98	31.520	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0017864	Tsr1	100	86.426	ENSSBOG00000020785	TSR1	100	86.426	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0017864	Tsr1	100	75.434	ENSSHAG00000011394	TSR1	100	75.434	Sarcophilus_harrisii
MGP_PahariEiJ_G0017864	Tsr1	99	55.746	ENSSFOG00015005455	tsr1	99	56.098	Scleropages_formosus
MGP_PahariEiJ_G0017864	Tsr1	99	53.892	ENSSMAG00000009504	tsr1	99	56.010	Scophthalmus_maximus
MGP_PahariEiJ_G0017864	Tsr1	99	54.611	ENSSDUG00000012074	tsr1	99	54.994	Seriola_dumerili
MGP_PahariEiJ_G0017864	Tsr1	99	55.048	ENSSLDG00000002031	tsr1	99	55.368	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0017864	Tsr1	100	72.264	ENSSARG00000000759	TSR1	100	72.886	Sorex_araneus
MGP_PahariEiJ_G0017864	Tsr1	99	67.528	ENSSPUG00000007042	TSR1	99	67.159	Sphenodon_punctatus
MGP_PahariEiJ_G0017864	Tsr1	99	54.197	ENSSPAG00000021951	tsr1	99	55.928	Stegastes_partitus
MGP_PahariEiJ_G0017864	Tsr1	100	87.687	ENSSSCG00000038534	TSR1	100	87.687	Sus_scrofa
MGP_PahariEiJ_G0017864	Tsr1	90	70.548	ENSTGUG00000005883	TSR1	100	70.628	Taeniopygia_guttata
MGP_PahariEiJ_G0017864	Tsr1	99	55.152	ENSTRUG00000004665	tsr1	99	56.204	Takifugu_rubripes
MGP_PahariEiJ_G0017864	Tsr1	99	55.610	ENSTNIG00000016196	tsr1	99	55.857	Tetraodon_nigroviridis
MGP_PahariEiJ_G0017864	Tsr1	67	91.538	ENSTBEG00000015275	-	67	91.538	Tupaia_belangeri
MGP_PahariEiJ_G0017864	Tsr1	100	86.940	ENSTTRG00000001177	TSR1	100	86.940	Tursiops_truncatus
MGP_PahariEiJ_G0017864	Tsr1	100	85.890	ENSUAMG00000025160	TSR1	100	85.890	Ursus_americanus
MGP_PahariEiJ_G0017864	Tsr1	97	85.934	ENSUMAG00000009294	TSR1	98	86.788	Ursus_maritimus
MGP_PahariEiJ_G0017864	Tsr1	84	83.061	ENSVPAG00000000228	TSR1	100	82.169	Vicugna_pacos
MGP_PahariEiJ_G0017864	Tsr1	100	84.720	ENSVVUG00000021767	TSR1	100	85.093	Vulpes_vulpes
MGP_PahariEiJ_G0017864	Tsr1	99	58.701	ENSXETG00000023797	tsr1	100	60.345	Xenopus_tropicalis
MGP_PahariEiJ_G0017864	Tsr1	99	55.922	ENSXCOG00000009635	tsr1	99	56.740	Xiphophorus_couchianus
MGP_PahariEiJ_G0017864	Tsr1	99	54.337	ENSXMAG00000001397	tsr1	96	55.260	Xiphophorus_maculatus