EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0017965 (Gene tree)
Gene ID: 110331832
Gene Symbol: Utp6
Alias: 4732497O03Rik|HCA66
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 29820 bases
Position: chr14:47671033-47700852
Accession: 110331832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0035390	U3_assoc_6	PF08640.11	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0035391	-	642	-	-	- (aa)	-	-
MGP_PahariEiJ_T0035390	-	4013	-	MGP_PahariEiJ_P0035390	537 (aa)	XP_021068357	UPI000A30EDC9
MGP_PahariEiJ_T0035392	-	556	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0017965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0017965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0017965	Utp6	100	72.027	ENSG00000108651	UTP6	99	72.027	Homo_sapiens
MGP_PahariEiJ_G0017965	Utp6	100	51.926	ENSAPOG00000000435	utp6	99	51.926	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0017965	Utp6	99	70.302	ENSAMEG00000005443	UTP6	99	70.302	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0017965	Utp6	100	50.084	ENSACIG00000004124	utp6	99	50.084	Amphilophus_citrinellus
MGP_PahariEiJ_G0017965	Utp6	100	51.424	ENSAOCG00000016812	utp6	99	51.424	Amphiprion_ocellaris
MGP_PahariEiJ_G0017965	Utp6	100	50.586	ENSAPEG00000023565	utp6	99	50.586	Amphiprion_percula
MGP_PahariEiJ_G0017965	Utp6	100	54.035	ENSATEG00000003401	utp6	99	54.035	Anabas_testudineus
MGP_PahariEiJ_G0017965	Utp6	99	55.518	ENSAPLG00000005821	UTP6	98	55.518	Anas_platyrhynchos
MGP_PahariEiJ_G0017965	Utp6	100	59.799	ENSACAG00000009472	UTP6	99	59.799	Anolis_carolinensis
MGP_PahariEiJ_G0017965	Utp6	100	88.082	ENSANAG00000034603	UTP6	99	88.082	Aotus_nancymaae
MGP_PahariEiJ_G0017965	Utp6	100	53.099	ENSACLG00000006728	utp6	99	53.099	Astatotilapia_calliptera
MGP_PahariEiJ_G0017965	Utp6	100	52.421	ENSAMXG00000009478	utp6	99	52.421	Astyanax_mexicanus
MGP_PahariEiJ_G0017965	Utp6	99	76.250	ENSBTAG00000003769	-	98	62.479	Bos_taurus
MGP_PahariEiJ_G0017965	Utp6	99	69.723	ENSBTAG00000015612	UTP6	99	69.723	Bos_taurus
MGP_PahariEiJ_G0017965	Utp6	100	72.529	ENSCJAG00000014115	UTP6	99	72.529	Callithrix_jacchus
MGP_PahariEiJ_G0017965	Utp6	100	72.213	ENSCAFG00000018507	UTP6	99	72.213	Canis_familiaris
MGP_PahariEiJ_G0017965	Utp6	100	72.213	ENSCAFG00020014678	UTP6	99	72.213	Canis_lupus_dingo
MGP_PahariEiJ_G0017965	Utp6	99	64.322	ENSCHIG00000009726	-	99	64.322	Capra_hircus
MGP_PahariEiJ_G0017965	Utp6	99	64.489	ENSCHIG00000017954	-	99	64.489	Capra_hircus
MGP_PahariEiJ_G0017965	Utp6	100	63.819	ENSTSYG00000002202	UTP6	99	63.819	Carlito_syrichta
MGP_PahariEiJ_G0017965	Utp6	89	70.600	ENSCAPG00000017595	UTP6	98	70.600	Cavia_aperea
MGP_PahariEiJ_G0017965	Utp6	100	73.534	ENSCPOG00000014294	UTP6	100	73.534	Cavia_porcellus
MGP_PahariEiJ_G0017965	Utp6	100	66.164	ENSCCAG00000033318	-	99	65.997	Cebus_capucinus
MGP_PahariEiJ_G0017965	Utp6	100	71.692	ENSCATG00000034868	UTP6	99	71.692	Cercocebus_atys
MGP_PahariEiJ_G0017965	Utp6	100	75.712	ENSCLAG00000007274	UTP6	99	75.712	Chinchilla_lanigera
MGP_PahariEiJ_G0017965	Utp6	100	72.167	ENSCSAG00000006595	UTP6	99	72.167	Chlorocebus_sabaeus
MGP_PahariEiJ_G0017965	Utp6	86	75.155	ENSCHOG00000010940	-	73	75.155	Choloepus_hoffmanni
MGP_PahariEiJ_G0017965	Utp6	100	62.814	ENSCPBG00000004652	UTP6	99	62.814	Chrysemys_picta_bellii
MGP_PahariEiJ_G0017965	Utp6	99	37.209	ENSCING00000022947	-	88	37.209	Ciona_intestinalis
MGP_PahariEiJ_G0017965	Utp6	59	38.700	ENSCSAVG00000011416	-	98	38.700	Ciona_savignyi
MGP_PahariEiJ_G0017965	Utp6	86	58.812	ENSCANG00000031141	UTP6	89	58.812	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0017965	Utp6	100	76.461	ENSCGRG00001000046	Utp6	100	76.461	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0017965	Utp6	94	75.704	ENSCGRG00000011543	Utp6	100	75.704	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0017965	Utp6	94	60.174	ENSCSEG00000013422	utp6	99	67.213	Cynoglossus_semilaevis
MGP_PahariEiJ_G0017965	Utp6	100	51.591	ENSCVAG00000020322	utp6	99	51.089	Cyprinodon_variegatus
MGP_PahariEiJ_G0017965	Utp6	100	49.414	ENSDARG00000098433	utp6	100	64.641	Danio_rerio
MGP_PahariEiJ_G0017965	Utp6	100	72.408	ENSDNOG00000037018	UTP6	99	72.408	Dasypus_novemcinctus
MGP_PahariEiJ_G0017965	Utp6	91	71.376	ENSDORG00000003843	Utp6	100	71.376	Dipodomys_ordii
MGP_PahariEiJ_G0017965	Utp6	100	73.710	ENSEASG00005010870	UTP6	99	73.710	Equus_asinus_asinus
MGP_PahariEiJ_G0017965	Utp6	100	73.378	ENSECAG00000022217	UTP6	99	73.378	Equus_caballus
MGP_PahariEiJ_G0017965	Utp6	100	52.596	ENSELUG00000006618	utp6	99	52.596	Esox_lucius
MGP_PahariEiJ_G0017965	Utp6	100	72.222	ENSFCAG00000015795	UTP6	99	72.222	Felis_catus
MGP_PahariEiJ_G0017965	Utp6	100	59.966	ENSFALG00000002282	UTP6	99	59.966	Ficedula_albicollis
MGP_PahariEiJ_G0017965	Utp6	100	74.457	ENSFDAG00000019506	UTP6	100	74.457	Fukomys_damarensis
MGP_PahariEiJ_G0017965	Utp6	100	51.338	ENSFHEG00000010373	utp6	99	51.505	Fundulus_heteroclitus
MGP_PahariEiJ_G0017965	Utp6	100	51.424	ENSGMOG00000011958	utp6	99	51.424	Gadus_morhua
MGP_PahariEiJ_G0017965	Utp6	100	55.686	ENSGALG00000003260	UTP6	99	55.779	Gallus_gallus
MGP_PahariEiJ_G0017965	Utp6	100	51.338	ENSGAFG00000008505	utp6	99	51.505	Gambusia_affinis
MGP_PahariEiJ_G0017965	Utp6	100	52.261	ENSGACG00000019424	utp6	99	52.261	Gasterosteus_aculeatus
MGP_PahariEiJ_G0017965	Utp6	100	61.474	ENSGAGG00000004820	UTP6	99	61.474	Gopherus_agassizii
MGP_PahariEiJ_G0017965	Utp6	100	71.859	ENSGGOG00000013569	UTP6	99	71.859	Gorilla_gorilla
MGP_PahariEiJ_G0017965	Utp6	99	69.381	ENSGGOG00000026003	-	99	69.381	Gorilla_gorilla
MGP_PahariEiJ_G0017965	Utp6	100	53.099	ENSHBUG00000018668	utp6	99	53.099	Haplochromis_burtoni
MGP_PahariEiJ_G0017965	Utp6	100	72.955	ENSHGLG00000010332	UTP6	100	72.955	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017965	Utp6	99	83.234	ENSHGLG00000008642	-	95	83.234	Heterocephalus_glaber_female
MGP_PahariEiJ_G0017965	Utp6	100	70.117	ENSHGLG00100014271	-	100	70.117	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017965	Utp6	95	86.620	ENSHGLG00100006047	-	95	86.620	Heterocephalus_glaber_male
MGP_PahariEiJ_G0017965	Utp6	100	51.089	ENSHCOG00000017277	utp6	99	51.089	Hippocampus_comes
MGP_PahariEiJ_G0017965	Utp6	100	50.419	ENSIPUG00000022587	Utp6	99	50.419	Ictalurus_punctatus
MGP_PahariEiJ_G0017965	Utp6	100	75.459	ENSSTOG00000015875	UTP6	100	75.459	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0017965	Utp6	100	52.261	ENSKMAG00000021631	utp6	99	52.261	Kryptolebias_marmoratus
MGP_PahariEiJ_G0017965	Utp6	100	53.099	ENSLBEG00000002115	utp6	99	53.099	Labrus_bergylta
MGP_PahariEiJ_G0017965	Utp6	100	60.302	ENSLACG00000017158	UTP6	99	60.302	Latimeria_chalumnae
MGP_PahariEiJ_G0017965	Utp6	90	52.477	ENSLOCG00000013797	utp6	90	52.477	Lepisosteus_oculatus
MGP_PahariEiJ_G0017965	Utp6	100	70.618	ENSLAFG00000013008	UTP6	99	70.618	Loxodonta_africana
MGP_PahariEiJ_G0017965	Utp6	100	71.692	ENSMFAG00000038842	UTP6	99	71.692	Macaca_fascicularis
MGP_PahariEiJ_G0017965	Utp6	99	61.553	ENSMFAG00000041904	-	99	61.553	Macaca_fascicularis
MGP_PahariEiJ_G0017965	Utp6	100	71.692	ENSMMUG00000020403	UTP6	99	71.692	Macaca_mulatta
MGP_PahariEiJ_G0017965	Utp6	100	71.692	ENSMNEG00000039480	UTP6	99	71.692	Macaca_nemestrina
MGP_PahariEiJ_G0017965	Utp6	100	85.847	ENSMLEG00000032174	UTP6	99	85.847	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017965	Utp6	99	63.918	ENSMLEG00000039364	-	99	63.918	Mandrillus_leucophaeus
MGP_PahariEiJ_G0017965	Utp6	100	50.915	ENSMAMG00000002228	utp6	99	50.915	Mastacembelus_armatus
MGP_PahariEiJ_G0017965	Utp6	100	53.099	ENSMZEG00005023895	utp6	99	53.099	Maylandia_zebra
MGP_PahariEiJ_G0017965	Utp6	94	68.125	ENSMGAG00000008111	UTP6	99	54.674	Meleagris_gallopavo
MGP_PahariEiJ_G0017965	Utp6	100	85.811	ENSMAUG00000021895	Utp6	100	85.811	Mesocricetus_auratus
MGP_PahariEiJ_G0017965	Utp6	100	67.337	ENSMICG00000002632	UTP6	99	67.337	Microcebus_murinus
MGP_PahariEiJ_G0017965	Utp6	100	74.707	ENSMOCG00000014163	Utp6	100	74.707	Microtus_ochrogaster
MGP_PahariEiJ_G0017965	Utp6	100	50.334	ENSMMOG00000008653	utp6	99	66.102	Mola_mola
MGP_PahariEiJ_G0017965	Utp6	100	58.291	ENSMODG00000019206	UTP6	99	57.956	Monodelphis_domestica
MGP_PahariEiJ_G0017965	Utp6	100	51.672	ENSMALG00000021112	utp6	99	51.839	Monopterus_albus
MGP_PahariEiJ_G0017965	Utp6	100	80.435	MGP_CAROLIEiJ_G0016828	Utp6	100	80.435	Mus_caroli
MGP_PahariEiJ_G0017965	Utp6	100	80.602	ENSMUSG00000035575	Utp6	100	80.602	Mus_musculus
MGP_PahariEiJ_G0017965	Utp6	100	80.301	MGP_SPRETEiJ_G0017672	Utp6	100	80.301	Mus_spretus
MGP_PahariEiJ_G0017965	Utp6	100	72.910	ENSMPUG00000014581	UTP6	99	72.910	Mustela_putorius_furo
MGP_PahariEiJ_G0017965	Utp6	100	73.077	ENSMLUG00000016422	UTP6	99	73.077	Myotis_lucifugus
MGP_PahariEiJ_G0017965	Utp6	100	74.080	ENSNGAG00000015482	Utp6	100	74.080	Nannospalax_galili
MGP_PahariEiJ_G0017965	Utp6	100	52.931	ENSNBRG00000019714	utp6	99	52.931	Neolamprologus_brichardi
MGP_PahariEiJ_G0017965	Utp6	100	70.352	ENSNLEG00000011009	UTP6	99	70.352	Nomascus_leucogenys
MGP_PahariEiJ_G0017965	Utp6	82	84.892	ENSOPRG00000008446	-	74	84.892	Ochotona_princeps
MGP_PahariEiJ_G0017965	Utp6	66	86.207	ENSODEG00000011971	UTP6	90	86.207	Octodon_degus
MGP_PahariEiJ_G0017965	Utp6	100	59.184	ENSONIG00000018090	utp6	92	59.184	Oreochromis_niloticus
MGP_PahariEiJ_G0017965	Utp6	98	56.803	ENSOANG00000004279	UTP6	99	56.803	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0017965	Utp6	100	75.418	ENSOCUG00000016980	UTP6	99	75.418	Oryctolagus_cuniculus
MGP_PahariEiJ_G0017965	Utp6	100	52.341	ENSORLG00000003546	utp6	64	52.007	Oryzias_latipes
MGP_PahariEiJ_G0017965	Utp6	100	52.341	ENSORLG00020010377	utp6	99	52.007	Oryzias_latipes_hni
MGP_PahariEiJ_G0017965	Utp6	100	51.672	ENSORLG00015008893	utp6	99	51.338	Oryzias_latipes_hsok
MGP_PahariEiJ_G0017965	Utp6	100	51.839	ENSOMEG00000017487	utp6	99	51.672	Oryzias_melastigma
MGP_PahariEiJ_G0017965	Utp6	86	60.000	ENSOGAG00000004511	UTP6	100	60.687	Otolemur_garnettii
MGP_PahariEiJ_G0017965	Utp6	99	64.322	ENSOARG00000013474	UTP6	99	64.322	Ovis_aries
MGP_PahariEiJ_G0017965	Utp6	99	69.123	ENSPPAG00000016895	-	99	69.123	Pan_paniscus
MGP_PahariEiJ_G0017965	Utp6	100	76.214	ENSPPAG00000038089	UTP6	99	72.362	Pan_paniscus
MGP_PahariEiJ_G0017965	Utp6	100	72.697	ENSPPRG00000001010	UTP6	99	72.697	Panthera_pardus
MGP_PahariEiJ_G0017965	Utp6	100	72.529	ENSPTIG00000013913	UTP6	99	72.529	Panthera_tigris_altaica
MGP_PahariEiJ_G0017965	Utp6	100	76.214	ENSPTRG00000008977	UTP6	99	72.362	Pan_troglodytes
MGP_PahariEiJ_G0017965	Utp6	99	68.947	ENSPTRG00000044798	-	99	68.947	Pan_troglodytes
MGP_PahariEiJ_G0017965	Utp6	100	68.896	ENSPANG00000023113	UTP6	99	68.896	Papio_anubis
MGP_PahariEiJ_G0017965	Utp6	99	63.683	ENSPANG00000034274	-	99	63.683	Papio_anubis
MGP_PahariEiJ_G0017965	Utp6	100	51.505	ENSPKIG00000004653	utp6	99	51.505	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0017965	Utp6	100	59.631	ENSPSIG00000012435	UTP6	99	59.631	Pelodiscus_sinensis
MGP_PahariEiJ_G0017965	Utp6	100	51.839	ENSPMGG00000009548	utp6	99	51.338	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0017965	Utp6	100	77.129	ENSPEMG00000014081	Utp6	100	77.129	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0017965	Utp6	92	44.050	ENSPMAG00000009561	utp6	99	44.050	Petromyzon_marinus
MGP_PahariEiJ_G0017965	Utp6	100	60.702	ENSPCIG00000029968	UTP6	86	60.870	Phascolarctos_cinereus
MGP_PahariEiJ_G0017965	Utp6	100	51.505	ENSPFOG00000013918	utp6	99	50.836	Poecilia_formosa
MGP_PahariEiJ_G0017965	Utp6	100	51.839	ENSPLAG00000017825	utp6	99	51.171	Poecilia_latipinna
MGP_PahariEiJ_G0017965	Utp6	100	51.505	ENSPMEG00000008133	utp6	99	50.836	Poecilia_mexicana
MGP_PahariEiJ_G0017965	Utp6	100	50.251	ENSPREG00000013108	utp6	99	50.419	Poecilia_reticulata
MGP_PahariEiJ_G0017965	Utp6	100	67.839	ENSPPYG00000008154	UTP6	99	67.839	Pongo_abelii
MGP_PahariEiJ_G0017965	Utp6	74	91.667	ENSPCAG00000014878	-	73	91.667	Procavia_capensis
MGP_PahariEiJ_G0017965	Utp6	100	67.224	ENSPCOG00000010224	UTP6	99	67.224	Propithecus_coquereli
MGP_PahariEiJ_G0017965	Utp6	100	87.425	ENSPVAG00000015759	UTP6	92	87.425	Pteropus_vampyrus
MGP_PahariEiJ_G0017965	Utp6	100	52.764	ENSPNYG00000002290	utp6	99	52.764	Pundamilia_nyererei
MGP_PahariEiJ_G0017965	Utp6	100	50.084	ENSPNAG00000027370	utp6	99	50.084	Pygocentrus_nattereri
MGP_PahariEiJ_G0017965	Utp6	100	74.707	ENSRNOG00000014209	Utp6	100	74.707	Rattus_norvegicus
MGP_PahariEiJ_G0017965	Utp6	100	70.854	ENSRBIG00000020822	UTP6	99	70.854	Rhinopithecus_bieti
MGP_PahariEiJ_G0017965	Utp6	100	70.854	ENSRROG00000036838	UTP6	99	70.854	Rhinopithecus_roxellana
MGP_PahariEiJ_G0017965	Utp6	55	72.109	ENSSHAG00000018792	-	96	72.109	Sarcophilus_harrisii
MGP_PahariEiJ_G0017965	Utp6	100	51.085	ENSSFOG00015005978	utp6	99	51.085	Scleropages_formosus
MGP_PahariEiJ_G0017965	Utp6	100	51.591	ENSSMAG00000014772	utp6	99	51.759	Scophthalmus_maximus
MGP_PahariEiJ_G0017965	Utp6	100	52.094	ENSSDUG00000000329	utp6	99	52.261	Seriola_dumerili
MGP_PahariEiJ_G0017965	Utp6	100	51.926	ENSSLDG00000016724	utp6	99	52.094	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0017965	Utp6	99	66.499	ENSSARG00000010778	UTP6	99	66.499	Sorex_araneus
MGP_PahariEiJ_G0017965	Utp6	100	61.474	ENSSPUG00000005273	UTP6	99	60.972	Sphenodon_punctatus
MGP_PahariEiJ_G0017965	Utp6	100	50.000	ENSSPAG00000011871	utp6	99	50.000	Stegastes_partitus
MGP_PahariEiJ_G0017965	Utp6	100	87.151	ENSSSCG00000017745	UTP6	99	87.151	Sus_scrofa
MGP_PahariEiJ_G0017965	Utp6	100	58.863	ENSTGUG00000004999	UTP6	99	60.368	Taeniopygia_guttata
MGP_PahariEiJ_G0017965	Utp6	100	51.926	ENSTRUG00000012005	utp6	100	51.926	Takifugu_rubripes
MGP_PahariEiJ_G0017965	Utp6	100	51.591	ENSTNIG00000003235	utp6	100	51.591	Tetraodon_nigroviridis
MGP_PahariEiJ_G0017965	Utp6	64	75.691	ENSTBEG00000005388	-	57	75.691	Tupaia_belangeri
MGP_PahariEiJ_G0017965	Utp6	100	71.357	ENSTTRG00000009911	UTP6	99	71.357	Tursiops_truncatus
MGP_PahariEiJ_G0017965	Utp6	99	71.141	ENSUMAG00000015139	UTP6	99	71.141	Ursus_maritimus
MGP_PahariEiJ_G0017965	Utp6	100	70.805	ENSVPAG00000005782	UTP6	99	70.805	Vicugna_pacos
MGP_PahariEiJ_G0017965	Utp6	100	72.697	ENSVVUG00000012238	UTP6	99	72.697	Vulpes_vulpes
MGP_PahariEiJ_G0017965	Utp6	99	44.966	ENSXETG00000020057	utp6	99	44.966	Xenopus_tropicalis
MGP_PahariEiJ_G0017965	Utp6	100	49.500	ENSXCOG00000013626	utp6	99	49.667	Xiphophorus_couchianus
MGP_PahariEiJ_G0017965	Utp6	100	51.338	ENSXMAG00000017414	utp6	99	51.003	Xiphophorus_maculatus