EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018193 (Gene tree)
Gene ID: 110332287
Gene Symbol: Cwc25
Alias: 1300013D05Rik|Ccdc49|R75228
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 21636 bases
Position: chr14:65174795-65196430
Accession: 110332287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0036288	CWC25	PF12542.8	1.7e-19	1	1
MGP_PahariEiJ_P0036290	CWC25	PF12542.8	4.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0036290	-	1830	-	MGP_PahariEiJ_P0036290	205 (aa)	-	-
MGP_PahariEiJ_T0036288	-	3038	-	MGP_PahariEiJ_P0036288	417 (aa)	XP_021069085	UPI000A3082EE
MGP_PahariEiJ_T0036289	-	668	-	MGP_PahariEiJ_P0036289	131 (aa)	-	-
MGP_PahariEiJ_T0036287	-	2160	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018193	Cwc25	100	84.742	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
MGP_PahariEiJ_G0018193	Cwc25	100	83.607	ENSAMEG00000004292	CWC25	100	83.372	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0018193	Cwc25	100	52.535	ENSAPEG00000013237	cwc25	100	54.756	Amphiprion_percula
MGP_PahariEiJ_G0018193	Cwc25	100	50.901	ENSATEG00000000799	cwc25	100	53.972	Anabas_testudineus
MGP_PahariEiJ_G0018193	Cwc25	99	64.941	ENSAPLG00000003710	CWC25	99	66.197	Anas_platyrhynchos
MGP_PahariEiJ_G0018193	Cwc25	100	67.696	ENSACAG00000013140	CWC25	100	67.696	Anolis_carolinensis
MGP_PahariEiJ_G0018193	Cwc25	71	97.931	ENSANAG00000033550	CWC25	89	86.598	Aotus_nancymaae
MGP_PahariEiJ_G0018193	Cwc25	70	73.427	ENSACLG00000009352	cwc25	100	53.972	Astatotilapia_calliptera
MGP_PahariEiJ_G0018193	Cwc25	99	50.600	ENSAMXG00000035125	cwc25	99	51.551	Astyanax_mexicanus
MGP_PahariEiJ_G0018193	Cwc25	100	86.150	ENSBTAG00000030591	CWC25	100	85.681	Bos_taurus
MGP_PahariEiJ_G0018193	Cwc25	100	82.629	ENSCJAG00000008289	CWC25	100	83.568	Callithrix_jacchus
MGP_PahariEiJ_G0018193	Cwc25	100	80.998	ENSCAFG00000016561	CWC25	100	82.629	Canis_familiaris
MGP_PahariEiJ_G0018193	Cwc25	100	82.394	ENSCAFG00020023017	CWC25	100	82.394	Canis_lupus_dingo
MGP_PahariEiJ_G0018193	Cwc25	100	85.915	ENSCHIG00000015063	CWC25	100	85.446	Capra_hircus
MGP_PahariEiJ_G0018193	Cwc25	73	96.000	ENSTSYG00000011332	CWC25	100	76.581	Carlito_syrichta
MGP_PahariEiJ_G0018193	Cwc25	99	73.159	ENSCAPG00000014542	CWC25	99	76.359	Cavia_aperea
MGP_PahariEiJ_G0018193	Cwc25	100	74.822	ENSCPOG00000015127	CWC25	100	76.960	Cavia_porcellus
MGP_PahariEiJ_G0018193	Cwc25	100	82.436	ENSCCAG00000028719	CWC25	100	84.706	Cebus_capucinus
MGP_PahariEiJ_G0018193	Cwc25	100	79.673	ENSCATG00000040771	CWC25	100	81.221	Cercocebus_atys
MGP_PahariEiJ_G0018193	Cwc25	100	77.910	ENSCLAG00000017102	CWC25	87	98.611	Chinchilla_lanigera
MGP_PahariEiJ_G0018193	Cwc25	100	84.742	ENSCSAG00000002654	CWC25	100	85.915	Chlorocebus_sabaeus
MGP_PahariEiJ_G0018193	Cwc25	99	71.897	ENSCPBG00000027490	CWC25	88	70.616	Chrysemys_picta_bellii
MGP_PahariEiJ_G0018193	Cwc25	100	78.972	ENSCANG00000037099	CWC25	100	80.516	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0018193	Cwc25	100	92.619	ENSCGRG00001020785	Cwc25	100	92.619	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018193	Cwc25	100	92.619	ENSCGRG00000005085	Cwc25	100	92.619	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018193	Cwc25	70	73.427	ENSCSEG00000016305	cwc25	100	52.594	Cynoglossus_semilaevis
MGP_PahariEiJ_G0018193	Cwc25	69	74.648	ENSCVAG00000007828	cwc25	100	52.914	Cyprinodon_variegatus
MGP_PahariEiJ_G0018193	Cwc25	100	53.333	ENSDARG00000003382	cwc25	100	53.162	Danio_rerio
MGP_PahariEiJ_G0018193	Cwc25	100	82.436	ENSDNOG00000042410	CWC25	100	83.138	Dasypus_novemcinctus
MGP_PahariEiJ_G0018193	Cwc25	100	85.343	ENSDORG00000003061	Cwc25	100	86.288	Dipodomys_ordii
MGP_PahariEiJ_G0018193	Cwc25	70	42.593	FBgn0031452	Cwc25	61	42.553	Drosophila_melanogaster
MGP_PahariEiJ_G0018193	Cwc25	100	47.897	ENSEBUG00000002947	cwc25	82	62.937	Eptatretus_burgeri
MGP_PahariEiJ_G0018193	Cwc25	100	83.568	ENSEASG00005001871	CWC25	100	85.211	Equus_asinus_asinus
MGP_PahariEiJ_G0018193	Cwc25	100	83.803	ENSECAG00000019122	CWC25	100	85.446	Equus_caballus
MGP_PahariEiJ_G0018193	Cwc25	76	71.296	ENSEEUG00000000018	CWC25	100	71.077	Erinaceus_europaeus
MGP_PahariEiJ_G0018193	Cwc25	100	53.256	ENSELUG00000009127	cwc25	100	53.488	Esox_lucius
MGP_PahariEiJ_G0018193	Cwc25	100	84.038	ENSFCAG00000028119	CWC25	100	83.803	Felis_catus
MGP_PahariEiJ_G0018193	Cwc25	99	57.143	ENSFALG00000013293	CWC25	99	58.140	Ficedula_albicollis
MGP_PahariEiJ_G0018193	Cwc25	100	72.813	ENSFDAG00000007745	CWC25	100	73.286	Fukomys_damarensis
MGP_PahariEiJ_G0018193	Cwc25	69	73.944	ENSFHEG00000004754	cwc25	100	54.824	Fundulus_heteroclitus
MGP_PahariEiJ_G0018193	Cwc25	69	69.718	ENSGMOG00000013001	cwc25	73	71.687	Gadus_morhua
MGP_PahariEiJ_G0018193	Cwc25	100	70.283	ENSGALG00000001624	CWC25	100	70.519	Gallus_gallus
MGP_PahariEiJ_G0018193	Cwc25	69	73.239	ENSGAFG00000007492	cwc25	100	52.693	Gambusia_affinis
MGP_PahariEiJ_G0018193	Cwc25	100	71.963	ENSGAGG00000022972	CWC25	100	70.960	Gopherus_agassizii
MGP_PahariEiJ_G0018193	Cwc25	100	84.272	ENSGGOG00000007083	CWC25	100	86.385	Gorilla_gorilla
MGP_PahariEiJ_G0018193	Cwc25	70	72.727	ENSHBUG00000001392	cwc25	100	53.162	Haplochromis_burtoni
MGP_PahariEiJ_G0018193	Cwc25	100	75.297	ENSHGLG00000014785	CWC25	100	76.636	Heterocephalus_glaber_female
MGP_PahariEiJ_G0018193	Cwc25	100	72.770	ENSHGLG00100017354	CWC25	100	71.831	Heterocephalus_glaber_male
MGP_PahariEiJ_G0018193	Cwc25	69	73.944	ENSHCOG00000002434	cwc25	100	54.292	Hippocampus_comes
MGP_PahariEiJ_G0018193	Cwc25	100	51.522	ENSIPUG00000012581	CWC25	100	52.214	Ictalurus_punctatus
MGP_PahariEiJ_G0018193	Cwc25	100	83.568	ENSSTOG00000014268	CWC25	100	84.977	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018193	Cwc25	100	53.037	ENSKMAG00000015418	cwc25	99	53.162	Kryptolebias_marmoratus
MGP_PahariEiJ_G0018193	Cwc25	85	52.617	ENSLACG00000001743	CWC25	100	53.463	Latimeria_chalumnae
MGP_PahariEiJ_G0018193	Cwc25	100	52.074	ENSLOCG00000013707	cwc25	100	54.005	Lepisosteus_oculatus
MGP_PahariEiJ_G0018193	Cwc25	100	82.227	ENSLAFG00000002238	CWC25	100	83.412	Loxodonta_africana
MGP_PahariEiJ_G0018193	Cwc25	85	82.597	ENSMFAG00000002357	CWC25	100	83.978	Macaca_fascicularis
MGP_PahariEiJ_G0018193	Cwc25	85	82.597	ENSMMUG00000002944	CWC25	90	83.978	Macaca_mulatta
MGP_PahariEiJ_G0018193	Cwc25	100	85.211	ENSMNEG00000033729	CWC25	100	86.385	Macaca_nemestrina
MGP_PahariEiJ_G0018193	Cwc25	91	84.278	ENSMLEG00000033355	CWC25	100	85.347	Mandrillus_leucophaeus
MGP_PahariEiJ_G0018193	Cwc25	100	50.588	ENSMAMG00000005194	cwc25	100	52.113	Mastacembelus_armatus
MGP_PahariEiJ_G0018193	Cwc25	70	73.427	ENSMZEG00005012421	cwc25	100	53.972	Maylandia_zebra
MGP_PahariEiJ_G0018193	Cwc25	99	69.860	ENSMGAG00000005158	CWC25	99	69.321	Meleagris_gallopavo
MGP_PahariEiJ_G0018193	Cwc25	100	85.446	ENSMICG00000003004	CWC25	100	86.854	Microcebus_murinus
MGP_PahariEiJ_G0018193	Cwc25	100	90.000	ENSMOCG00000000224	Cwc25	100	91.429	Microtus_ochrogaster
MGP_PahariEiJ_G0018193	Cwc25	100	78.404	ENSMODG00000012627	CWC25	100	79.812	Monodelphis_domestica
MGP_PahariEiJ_G0018193	Cwc25	100	55.349	ENSMALG00000005638	cwc25	100	55.450	Monopterus_albus
MGP_PahariEiJ_G0018193	Cwc25	100	93.046	MGP_CAROLIEiJ_G0017064	Cwc25	100	93.285	Mus_caroli
MGP_PahariEiJ_G0018193	Cwc25	100	93.525	ENSMUSG00000018541	Cwc25	100	94.484	Mus_musculus
MGP_PahariEiJ_G0018193	Cwc25	100	94.245	MGP_SPRETEiJ_G0017910	Cwc25	100	94.484	Mus_spretus
MGP_PahariEiJ_G0018193	Cwc25	100	81.948	ENSMPUG00000015077	CWC25	100	83.333	Mustela_putorius_furo
MGP_PahariEiJ_G0018193	Cwc25	100	83.568	ENSMLUG00000029653	CWC25	100	84.977	Myotis_lucifugus
MGP_PahariEiJ_G0018193	Cwc25	70	99.301	ENSMLUG00000029248	-	98	98.802	Myotis_lucifugus
MGP_PahariEiJ_G0018193	Cwc25	100	87.500	ENSNGAG00000007394	Cwc25	100	86.792	Nannospalax_galili
MGP_PahariEiJ_G0018193	Cwc25	100	84.272	ENSNLEG00000000617	CWC25	100	86.150	Nomascus_leucogenys
MGP_PahariEiJ_G0018193	Cwc25	99	80.238	ENSMEUG00000004156	CWC25	100	79.762	Notamacropus_eugenii
MGP_PahariEiJ_G0018193	Cwc25	85	67.036	ENSOPRG00000001941	CWC25	100	67.313	Ochotona_princeps
MGP_PahariEiJ_G0018193	Cwc25	100	76.850	ENSODEG00000017487	CWC25	100	78.282	Octodon_degus
MGP_PahariEiJ_G0018193	Cwc25	70	73.427	ENSONIG00000003251	cwc25	100	52.914	Oreochromis_niloticus
MGP_PahariEiJ_G0018193	Cwc25	69	93.662	ENSOANG00000001231	-	100	68.638	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0018193	Cwc25	100	82.160	ENSOCUG00000013906	CWC25	100	83.568	Oryctolagus_cuniculus
MGP_PahariEiJ_G0018193	Cwc25	70	70.629	ENSORLG00000018569	cwc25	100	53.412	Oryzias_latipes
MGP_PahariEiJ_G0018193	Cwc25	70	70.629	ENSORLG00020012087	cwc25	100	52.143	Oryzias_latipes_hni
MGP_PahariEiJ_G0018193	Cwc25	70	70.629	ENSORLG00015011062	cwc25	100	51.659	Oryzias_latipes_hsok
MGP_PahariEiJ_G0018193	Cwc25	100	52.246	ENSOMEG00000019365	cwc25	100	53.664	Oryzias_melastigma
MGP_PahariEiJ_G0018193	Cwc25	100	75.887	ENSOGAG00000008785	CWC25	100	76.941	Otolemur_garnettii
MGP_PahariEiJ_G0018193	Cwc25	100	85.681	ENSOARG00000009937	CWC25	100	85.211	Ovis_aries
MGP_PahariEiJ_G0018193	Cwc25	100	84.742	ENSPPAG00000023487	CWC25	100	86.620	Pan_paniscus
MGP_PahariEiJ_G0018193	Cwc25	100	83.803	ENSPPRG00000005029	CWC25	100	83.568	Panthera_pardus
MGP_PahariEiJ_G0018193	Cwc25	100	83.803	ENSPTIG00000020264	CWC25	100	83.568	Panthera_tigris_altaica
MGP_PahariEiJ_G0018193	Cwc25	100	84.507	ENSPTRG00000009077	CWC25	100	86.385	Pan_troglodytes
MGP_PahariEiJ_G0018193	Cwc25	100	85.211	ENSPANG00000022017	CWC25	100	86.385	Papio_anubis
MGP_PahariEiJ_G0018193	Cwc25	100	50.235	ENSPKIG00000007116	cwc25	100	50.235	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0018193	Cwc25	88	70.557	ENSPSIG00000011817	CWC25	99	68.984	Pelodiscus_sinensis
MGP_PahariEiJ_G0018193	Cwc25	100	87.381	ENSPEMG00000000026	Cwc25	100	88.810	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018193	Cwc25	100	79.577	ENSPCIG00000002943	CWC25	100	79.108	Phascolarctos_cinereus
MGP_PahariEiJ_G0018193	Cwc25	100	50.580	ENSPFOG00000017152	cwc25	100	53.396	Poecilia_formosa
MGP_PahariEiJ_G0018193	Cwc25	96	48.357	ENSPLAG00000004535	cwc25	100	51.582	Poecilia_latipinna
MGP_PahariEiJ_G0018193	Cwc25	100	50.452	ENSPMEG00000023752	cwc25	100	53.162	Poecilia_mexicana
MGP_PahariEiJ_G0018193	Cwc25	100	84.038	ENSPPYG00000008503	CWC25	100	85.681	Pongo_abelii
MGP_PahariEiJ_G0018193	Cwc25	67	99.270	ENSPCAG00000000433	CWC25	100	77.285	Procavia_capensis
MGP_PahariEiJ_G0018193	Cwc25	100	84.507	ENSPCOG00000023678	CWC25	100	86.385	Propithecus_coquereli
MGP_PahariEiJ_G0018193	Cwc25	99	83.095	ENSPVAG00000002273	CWC25	100	82.857	Pteropus_vampyrus
MGP_PahariEiJ_G0018193	Cwc25	100	91.127	ENSRNOG00000004091	Cwc25	100	91.607	Rattus_norvegicus
MGP_PahariEiJ_G0018193	Cwc25	100	84.742	ENSRBIG00000033457	CWC25	100	85.915	Rhinopithecus_bieti
MGP_PahariEiJ_G0018193	Cwc25	100	84.977	ENSRROG00000039968	CWC25	100	86.150	Rhinopithecus_roxellana
MGP_PahariEiJ_G0018193	Cwc25	100	79.343	ENSSHAG00000017267	CWC25	100	80.282	Sarcophilus_harrisii
MGP_PahariEiJ_G0018193	Cwc25	69	74.648	ENSSDUG00000004302	cwc25	100	53.953	Seriola_dumerili
MGP_PahariEiJ_G0018193	Cwc25	69	73.944	ENSSLDG00000005761	cwc25	100	53.488	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0018193	Cwc25	85	71.823	ENSSARG00000006871	CWC25	100	73.829	Sorex_araneus
MGP_PahariEiJ_G0018193	Cwc25	100	72.791	ENSSPUG00000018024	CWC25	100	71.860	Sphenodon_punctatus
MGP_PahariEiJ_G0018193	Cwc25	100	83.803	ENSSSCG00000021478	CWC25	100	84.038	Sus_scrofa
MGP_PahariEiJ_G0018193	Cwc25	99	61.827	ENSTGUG00000003011	CWC25	100	61.827	Taeniopygia_guttata
MGP_PahariEiJ_G0018193	Cwc25	100	52.093	ENSTRUG00000004650	cwc25	100	52.358	Takifugu_rubripes
MGP_PahariEiJ_G0018193	Cwc25	100	51.765	ENSTNIG00000014143	cwc25	100	52.706	Tetraodon_nigroviridis
MGP_PahariEiJ_G0018193	Cwc25	99	72.857	ENSTBEG00000013187	CWC25	85	99.375	Tupaia_belangeri
MGP_PahariEiJ_G0018193	Cwc25	99	85.238	ENSTTRG00000006662	CWC25	100	85.238	Tursiops_truncatus
MGP_PahariEiJ_G0018193	Cwc25	100	83.333	ENSUAMG00000005592	CWC25	100	83.099	Ursus_americanus
MGP_PahariEiJ_G0018193	Cwc25	100	83.099	ENSUMAG00000017097	CWC25	100	82.864	Ursus_maritimus
MGP_PahariEiJ_G0018193	Cwc25	99	76.683	ENSVPAG00000005680	CWC25	100	76.683	Vicugna_pacos
MGP_PahariEiJ_G0018193	Cwc25	100	80.998	ENSVVUG00000002182	CWC25	100	82.629	Vulpes_vulpes
MGP_PahariEiJ_G0018193	Cwc25	99	60.291	ENSXETG00000023722	cwc25	100	60.533	Xenopus_tropicalis
MGP_PahariEiJ_G0018193	Cwc25	69	73.944	ENSXMAG00000018113	cwc25	100	53.318	Xiphophorus_maculatus