EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018200 (Gene tree)
Gene ID: 110332516
Gene Symbol: Arl5c
Alias: Arl12
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 7595 bases
Position: chr14:65404881-65412475
Accession: 110332516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0036321	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0036321	-	1554	XM_021213782	MGP_PahariEiJ_P0036321	179 (aa)	XP_021069441	UPI000A3119EB
MGP_PahariEiJ_T0036322	-	719	-	MGP_PahariEiJ_P0036322	98 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0018200	Arl5c	88	39.241	MGP_PahariEiJ_G0030400	Arl11	90	39.241
MGP_PahariEiJ_G0018200	Arl5c	63	30.833	MGP_PahariEiJ_G0018517	Rab37	55	30.833
MGP_PahariEiJ_G0018200	Arl5c	84	41.509	MGP_PahariEiJ_G0027638	Arl4c	82	41.509
MGP_PahariEiJ_G0018200	Arl5c	98	72.571	MGP_PahariEiJ_G0025008	Arl5a	98	72.571
MGP_PahariEiJ_G0018200	Arl5c	86	35.625	MGP_PahariEiJ_G0018357	Arl4d	80	35.625
MGP_PahariEiJ_G0018200	Arl5c	89	45.625	MGP_PahariEiJ_G0031373	Arl1	96	43.931
MGP_PahariEiJ_G0018200	Arl5c	87	39.506	MGP_PahariEiJ_G0029472	Arl4a	81	39.506
MGP_PahariEiJ_G0018200	Arl5c	63	31.858	MGP_PahariEiJ_G0019602	Arl10	55	31.579
MGP_PahariEiJ_G0018200	Arl5c	96	41.618	MGP_PahariEiJ_G0014529	Arl3	95	41.618
MGP_PahariEiJ_G0018200	Arl5c	96	37.705	MGP_PahariEiJ_G0026253	Arfrp1	93	40.708
MGP_PahariEiJ_G0018200	Arl5c	96	42.775	MGP_PahariEiJ_G0021914	Arf5	96	42.775
MGP_PahariEiJ_G0018200	Arl5c	98	44.886	MGP_PahariEiJ_G0018418	Arf2	97	44.886
MGP_PahariEiJ_G0018200	Arl5c	98	74.286	MGP_PahariEiJ_G0024654	Arl5b	97	74.286
MGP_PahariEiJ_G0018200	Arl5c	98	44.318	MGP_PahariEiJ_G0020247	Arf3	96	46.203
MGP_PahariEiJ_G0018200	Arl5c	88	39.375	MGP_PahariEiJ_G0026509	Arl14	83	39.375
MGP_PahariEiJ_G0018200	Arl5c	88	41.139	MGP_PahariEiJ_G0014091	Arl2	86	41.139
MGP_PahariEiJ_G0018200	Arl5c	98	37.017	MGP_PahariEiJ_G0016558	Arl6	96	37.079
MGP_PahariEiJ_G0018200	Arl5c	69	32.812	MGP_PahariEiJ_G0020826	Rab12	51	32.812
MGP_PahariEiJ_G0018200	Arl5c	98	45.455	MGP_PahariEiJ_G0017561	Arf1	97	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018200	Arl5c	100	84.916	ENSAMEG00000004195	ARL5C	99	84.916	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0018200	Arl5c	99	79.213	ENSACAG00000003879	-	99	79.213	Anolis_carolinensis
MGP_PahariEiJ_G0018200	Arl5c	100	88.827	ENSCAFG00000016525	ARL5C	100	88.827	Canis_familiaris
MGP_PahariEiJ_G0018200	Arl5c	99	89.266	ENSCHIG00000008208	ARL5C	99	89.266	Capra_hircus
MGP_PahariEiJ_G0018200	Arl5c	59	85.849	ENSCHOG00000013232	-	100	85.849	Choloepus_hoffmanni
MGP_PahariEiJ_G0018200	Arl5c	99	88.136	ENSCGRG00001000695	Arl5c	99	88.136	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018200	Arl5c	99	88.701	ENSCGRG00000007376	Arl5c	99	88.701	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018200	Arl5c	100	87.709	ENSDNOG00000019741	ARL5C	100	87.709	Dasypus_novemcinctus
MGP_PahariEiJ_G0018200	Arl5c	99	88.136	ENSDORG00000016304	Arl5c	99	88.136	Dipodomys_ordii
MGP_PahariEiJ_G0018200	Arl5c	92	88.415	ENSEASG00005001922	ARL5C	76	88.415	Equus_asinus_asinus
MGP_PahariEiJ_G0018200	Arl5c	100	88.827	ENSECAG00000009024	ARL5C	100	88.827	Equus_caballus
MGP_PahariEiJ_G0018200	Arl5c	100	88.827	ENSFCAG00000009962	ARL5C	100	88.827	Felis_catus
MGP_PahariEiJ_G0018200	Arl5c	99	92.655	ENSSTOG00000011104	ARL5C	99	92.655	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018200	Arl5c	100	77.654	ENSLACG00000015332	ARL5C	100	77.654	Latimeria_chalumnae
MGP_PahariEiJ_G0018200	Arl5c	100	89.944	ENSLAFG00000018248	ARL5C	99	89.944	Loxodonta_africana
MGP_PahariEiJ_G0018200	Arl5c	99	84.181	ENSMAUG00000012845	Arl5c	87	84.181	Mesocricetus_auratus
MGP_PahariEiJ_G0018200	Arl5c	100	89.385	ENSMICG00000002661	ARL5C	100	89.385	Microcebus_murinus
MGP_PahariEiJ_G0018200	Arl5c	100	84.358	ENSMOCG00000000234	Arl5c	100	84.358	Microtus_ochrogaster
MGP_PahariEiJ_G0018200	Arl5c	100	97.207	MGP_CAROLIEiJ_G0017071	Arl5c	100	97.207	Mus_caroli
MGP_PahariEiJ_G0018200	Arl5c	100	96.648	ENSMUSG00000038352	Arl5c	100	96.648	Mus_musculus
MGP_PahariEiJ_G0018200	Arl5c	100	96.648	MGP_SPRETEiJ_G0017917	Arl5c	100	96.648	Mus_spretus
MGP_PahariEiJ_G0018200	Arl5c	100	87.709	ENSMLUG00000030149	ARL5C	99	87.709	Myotis_lucifugus
MGP_PahariEiJ_G0018200	Arl5c	100	85.475	ENSOGAG00000005894	ARL5C	100	85.475	Otolemur_garnettii
MGP_PahariEiJ_G0018200	Arl5c	100	88.827	ENSOARG00000010377	ARL5C	99	88.827	Ovis_aries
MGP_PahariEiJ_G0018200	Arl5c	100	88.827	ENSPPRG00000000975	ARL5C	100	88.827	Panthera_pardus
MGP_PahariEiJ_G0018200	Arl5c	100	88.268	ENSPTIG00000017487	ARL5C	100	88.268	Panthera_tigris_altaica
MGP_PahariEiJ_G0018200	Arl5c	100	94.972	ENSPEMG00000008932	Arl5c	100	94.972	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018200	Arl5c	100	90.503	ENSPCOG00000028489	ARL5C	100	90.503	Propithecus_coquereli
MGP_PahariEiJ_G0018200	Arl5c	94	88.095	ENSPVAG00000008495	ARL5C	99	88.095	Pteropus_vampyrus
MGP_PahariEiJ_G0018200	Arl5c	100	94.413	ENSRNOG00000036880	Arl5c	100	94.413	Rattus_norvegicus
MGP_PahariEiJ_G0018200	Arl5c	98	75.568	ENSSBOG00000021022	ARL5C	100	75.568	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0018200	Arl5c	96	78.947	ENSSPUG00000007555	ARL5C	100	80.982	Sphenodon_punctatus
MGP_PahariEiJ_G0018200	Arl5c	100	86.034	ENSTBEG00000007274	ARL5C	100	86.034	Tupaia_belangeri
MGP_PahariEiJ_G0018200	Arl5c	100	87.709	ENSUAMG00000012299	ARL5C	100	87.709	Ursus_americanus
MGP_PahariEiJ_G0018200	Arl5c	100	88.268	ENSUMAG00000017197	ARL5C	100	88.268	Ursus_maritimus
MGP_PahariEiJ_G0018200	Arl5c	100	75.419	ENSXETG00000023713	arl5c	92	75.419	Xenopus_tropicalis