EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0018314 (Gene tree)
Gene ID
110331416
Gene Symbol
Rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
24431 bases
Position
chr14:68172319-68196749
Accession
110331416
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0036641MMR_HSR1PF01926.230.0002111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0036642-1966-MGP_PahariEiJ_P0036642231 (aa)--
MGP_PahariEiJ_T0036643-411-MGP_PahariEiJ_P003664383 (aa)-UPI000059DD1B
MGP_PahariEiJ_T0036641-1921XM_021211979MGP_PahariEiJ_P0036641216 (aa)XP_021067638UPI0000027EBC
MGP_PahariEiJ_T0036644-440-MGP_PahariEiJ_P003664434 (aa)-UPI0003F485C9
Gene Model
Click here to download MGP_PahariEiJ_G0018314's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018314's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0018314Rab5c8935.859MGP_PahariEiJ_G0031967Rab9b9735.859
MGP_PahariEiJ_G0018314Rab5c9441.379MGP_PahariEiJ_G0015453Rab6b9841.379
MGP_PahariEiJ_G0018314Rab5c8638.806MGP_PahariEiJ_G0020826Rab129036.000
MGP_PahariEiJ_G0018314Rab5c5531.967MGP_PahariEiJ_G0022456Arl8b6231.967
MGP_PahariEiJ_G0018314Rab5c8944.330MGP_PahariEiJ_G0014033Rab1b9644.330
MGP_PahariEiJ_G0018314Rab5c9337.379MGP_PahariEiJ_G0026417Rab33b8937.379
MGP_PahariEiJ_G0018314Rab5c9040.306MGP_PahariEiJ_G0030259Rab2b9140.306
MGP_PahariEiJ_G0018314Rab5c7331.250MGP_PahariEiJ_G0017931Rab346231.250
MGP_PahariEiJ_G0018314Rab5c8788.770MGP_PahariEiJ_G0020730Rab5a9988.770
MGP_PahariEiJ_G0018314Rab5c9038.974MGP_PahariEiJ_G0023919Rab2a9238.974
MGP_PahariEiJ_G0018314Rab5c7135.948MGP_PahariEiJ_G0020181Rabl26735.948
MGP_PahariEiJ_G0018314Rab5c8131.250MGP_PahariEiJ_G0021797Rheb9331.250
MGP_PahariEiJ_G0018314Rab5c8937.113MGP_PahariEiJ_G0024212Rab359637.436
MGP_PahariEiJ_G0018314Rab5c9146.429MGP_PahariEiJ_G0020817Rab319846.429
MGP_PahariEiJ_G0018314Rab5c7335.625MGP_PahariEiJ_G0030851Rab366035.625
MGP_PahariEiJ_G0018314Rab5c8943.590MGP_PahariEiJ_G0016776Rab1a9543.590
MGP_PahariEiJ_G0018314Rab5c8233.898MGP_PahariEiJ_G0027261Rab237433.898
MGP_PahariEiJ_G0018314Rab5c8133.702MGP_PahariEiJ_G0013880Hras9433.702
MGP_PahariEiJ_G0018314Rab5c7545.062MGP_PahariEiJ_G0018716Rab187845.062
MGP_PahariEiJ_G0018314Rab5c9840.845MGP_PahariEiJ_G0018517Rab379540.845
MGP_PahariEiJ_G0018314Rab5c9786.124MGP_PahariEiJ_G0031135Rab5b9786.124
MGP_PahariEiJ_G0018314Rab5c7832.544MGP_PahariEiJ_G0022808Kras9830.102
MGP_PahariEiJ_G0018314Rab5c9042.029MGP_PahariEiJ_G0020420Rab11b9442.029
MGP_PahariEiJ_G0018314Rab5c8144.000MGP_PahariEiJ_G0013273Rab6a8444.000
MGP_PahariEiJ_G0018314Rab5c8638.172MGP_PahariEiJ_G0026671Rab139238.172
MGP_PahariEiJ_G0018314Rab5c9047.423MGP_PahariEiJ_G0026193Rab22a9847.423
MGP_PahariEiJ_G0018314Rab5c5531.707MGP_PahariEiJ_G0027868Arl8a6231.707
MGP_PahariEiJ_G0018314Rab5c8934.848MGP_PahariEiJ_G0032112Rab99734.848
MGP_PahariEiJ_G0018314Rab5c8330.000MGP_PahariEiJ_G0026889Nras9933.333
MGP_PahariEiJ_G0018314Rab5c7842.012MGP_PahariEiJ_G0013212Rab308342.012
MGP_PahariEiJ_G0018314Rab5c9041.262MGP_PahariEiJ_G0015211Rab11a8849.630
MGP_PahariEiJ_G0018314Rab5c9042.079MGP_PahariEiJ_G0026616Rab259442.079
MGP_PahariEiJ_G0018314Rab5c8935.784MGP_PahariEiJ_G0029630Rab159535.784
MGP_PahariEiJ_G0018314Rab5c8936.318MGP_PahariEiJ_G0031589Rab33a8536.318
MGP_PahariEiJ_G0018314Rab5c7742.442MGP_PahariEiJ_G0022362Rab79047.727
MGP_PahariEiJ_G0018314Rab5c8639.785MGP_PahariEiJ_G0024934Rab148739.785
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0018314Rab5c10098.611ENSG00000108774RAB5C100100.000Homo_sapiens
MGP_PahariEiJ_G0018314Rab5c9989.302ENSAPOG00000016864rab5c9891.628Acanthochromis_polyacanthus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSAMEG00000006003RAB5C10098.611Ailuropoda_melanoleuca
MGP_PahariEiJ_G0018314Rab5c9988.889ENSACIG00000010896rab5c9890.741Amphilophus_citrinellus
MGP_PahariEiJ_G0018314Rab5c9989.352ENSAOCG00000016614rab5c9891.667Amphiprion_ocellaris
MGP_PahariEiJ_G0018314Rab5c9789.100ENSAPEG00000017868-9791.469Amphiprion_percula
MGP_PahariEiJ_G0018314Rab5c10089.908ENSATEG00000001937rab5c10091.284Anabas_testudineus
MGP_PahariEiJ_G0018314Rab5c9499.020ENSANAG00000025390RAB5C10099.020Aotus_nancymaae
MGP_PahariEiJ_G0018314Rab5c9987.963ENSACLG00000002706rab5c9890.741Astatotilapia_calliptera
MGP_PahariEiJ_G0018314Rab5c9690.047ENSACLG00000008615-9989.498Astatotilapia_calliptera
MGP_PahariEiJ_G0018314Rab5c9989.862ENSAMXG00000043717rab5c9891.705Astyanax_mexicanus
MGP_PahariEiJ_G0018314Rab5c9689.048ENSAMXG00000037267-9991.429Astyanax_mexicanus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSBTAG00000006982RAB5C10098.611Bos_taurus
MGP_PahariEiJ_G0018314Rab5c9976.279WBGene00004268rab-59976.279Caenorhabditis_elegans
MGP_PahariEiJ_G0018314Rab5c10098.148ENSCAFG00000015629RAB5C10098.148Canis_familiaris
MGP_PahariEiJ_G0018314Rab5c10098.148ENSCAFG00020013537RAB5C10098.148Canis_lupus_dingo
MGP_PahariEiJ_G0018314Rab5c10098.611ENSCHIG00000012960RAB5C10098.611Capra_hircus
MGP_PahariEiJ_G0018314Rab5c10099.074ENSTSYG00000030531RAB5C10099.074Carlito_syrichta
MGP_PahariEiJ_G0018314Rab5c10099.074ENSCCAG00000025940RAB5C10099.074Cebus_capucinus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSCATG00000040873RAB5C10098.611Cercocebus_atys
MGP_PahariEiJ_G0018314Rab5c10097.685ENSCLAG00000016650RAB5C10097.685Chinchilla_lanigera
MGP_PahariEiJ_G0018314Rab5c8299.438ENSCHOG00000009886RAB5C10099.438Choloepus_hoffmanni
MGP_PahariEiJ_G0018314Rab5c9976.168ENSCING00000003340-9976.168Ciona_intestinalis
MGP_PahariEiJ_G0018314Rab5c9974.545ENSCSAVG00000000613-9983.333Ciona_savignyi
MGP_PahariEiJ_G0018314Rab5c10098.611ENSCGRG00001014226Rab5c10098.611Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018314Rab5c10098.611ENSCGRG00000007534Rab5c10098.611Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018314Rab5c9991.204ENSCSEG00000017024rab5c9891.204Cynoglossus_semilaevis
MGP_PahariEiJ_G0018314Rab5c9989.352ENSCVAG00000009550rab5c9891.204Cyprinodon_variegatus
MGP_PahariEiJ_G0018314Rab5c10098.148ENSDNOG00000038853RAB5C10098.148Dasypus_novemcinctus
MGP_PahariEiJ_G0018314Rab5c10098.148ENSDORG00000006819Rab5c10098.148Dipodomys_ordii
MGP_PahariEiJ_G0018314Rab5c9974.648FBgn0014010Rab59574.648Drosophila_melanogaster
MGP_PahariEiJ_G0018314Rab5c9979.535ENSEBUG00000014794rab5c10079.535Eptatretus_burgeri
MGP_PahariEiJ_G0018314Rab5c10098.611ENSEASG00005009281RAB5C10098.611Equus_asinus_asinus
MGP_PahariEiJ_G0018314Rab5c10099.074ENSECAG00000025054RAB5C10099.074Equus_caballus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSEEUG00000002790RAB5C10098.611Erinaceus_europaeus
MGP_PahariEiJ_G0018314Rab5c9988.889ENSELUG00000010439-9888.889Esox_lucius
MGP_PahariEiJ_G0018314Rab5c9987.963ENSELUG00000018516rab5c9990.278Esox_lucius
MGP_PahariEiJ_G0018314Rab5c10098.611ENSFCAG00000002148RAB5C10098.611Felis_catus
MGP_PahariEiJ_G0018314Rab5c10095.833ENSFDAG00000021541RAB5C10095.833Fukomys_damarensis
MGP_PahariEiJ_G0018314Rab5c9989.352ENSFHEG00000012117rab5c9891.204Fundulus_heteroclitus
MGP_PahariEiJ_G0018314Rab5c9991.705ENSFHEG00000015268-9991.705Fundulus_heteroclitus
MGP_PahariEiJ_G0018314Rab5c9987.963ENSGMOG00000015096rab5c9890.741Gadus_morhua
MGP_PahariEiJ_G0018314Rab5c7888.166ENSGMOG00000001876-9888.166Gadus_morhua
MGP_PahariEiJ_G0018314Rab5c9691.905ENSGAFG00000003642-9989.091Gambusia_affinis
MGP_PahariEiJ_G0018314Rab5c9989.815ENSGAFG00000000884rab5c9891.667Gambusia_affinis
MGP_PahariEiJ_G0018314Rab5c8794.681ENSGACG00000008659rab5c9887.037Gasterosteus_aculeatus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSGGOG00000005472RAB5C10098.611Gorilla_gorilla
MGP_PahariEiJ_G0018314Rab5c9690.047ENSHBUG00000006823-9989.498Haplochromis_burtoni
MGP_PahariEiJ_G0018314Rab5c9987.963ENSHBUG00000002014rab5c9890.741Haplochromis_burtoni
MGP_PahariEiJ_G0018314Rab5c10095.370ENSHGLG00000012067RAB5C10095.370Heterocephalus_glaber_female
MGP_PahariEiJ_G0018314Rab5c9989.862ENSHCOG00000004662rab5c9791.244Hippocampus_comes
MGP_PahariEiJ_G0018314Rab5c9782.547ENSHCOG00000020238-10080.909Hippocampus_comes
MGP_PahariEiJ_G0018314Rab5c9687.619ENSIPUG00000020082rab5c9888.532Ictalurus_punctatus
MGP_PahariEiJ_G0018314Rab5c10099.074ENSSTOG00000006620RAB5C10099.074Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSJJAG00000021181Rab5c10098.611Jaculus_jaculus
MGP_PahariEiJ_G0018314Rab5c9988.889ENSKMAG00000020038rab5c9891.204Kryptolebias_marmoratus
MGP_PahariEiJ_G0018314Rab5c9988.940ENSKMAG00000017417-9988.940Kryptolebias_marmoratus
MGP_PahariEiJ_G0018314Rab5c9990.278ENSLBEG00000004128rab5c9892.130Labrus_bergylta
MGP_PahariEiJ_G0018314Rab5c10088.532ENSLBEG00000010408-9988.532Labrus_bergylta
MGP_PahariEiJ_G0018314Rab5c9994.393ENSLOCG00000012566rab5c10094.393Lepisosteus_oculatus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSMFAG00000039627RAB5C10098.611Macaca_fascicularis
MGP_PahariEiJ_G0018314Rab5c10098.611ENSMNEG00000000355RAB5C10098.611Macaca_nemestrina
MGP_PahariEiJ_G0018314Rab5c9988.940ENSMAMG00000016207-9988.940Mastacembelus_armatus
MGP_PahariEiJ_G0018314Rab5c9988.426ENSMAMG00000022322rab5c9890.741Mastacembelus_armatus
MGP_PahariEiJ_G0018314Rab5c9987.963ENSMZEG00005022735rab5c9890.741Maylandia_zebra
MGP_PahariEiJ_G0018314Rab5c9690.047ENSMZEG00005021090-9989.498Maylandia_zebra
MGP_PahariEiJ_G0018314Rab5c10099.537ENSMAUG00000015005Rab5c10099.537Mesocricetus_auratus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSMICG00000041608RAB5C10098.611Microcebus_murinus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSMOCG00000018531-10098.611Microtus_ochrogaster
MGP_PahariEiJ_G0018314Rab5c10089.908ENSMMOG00000020621rab5c9989.908Mola_mola
MGP_PahariEiJ_G0018314Rab5c9988.073ENSMALG00000022348-9988.073Monopterus_albus
MGP_PahariEiJ_G0018314Rab5c9784.360ENSMALG00000006052rab5c9684.186Monopterus_albus
MGP_PahariEiJ_G0018314Rab5c100100.000MGP_CAROLIEiJ_G0017184Rab5c100100.000Mus_caroli
MGP_PahariEiJ_G0018314Rab5c100100.000ENSMUSG00000019173Rab5c100100.000Mus_musculus
MGP_PahariEiJ_G0018314Rab5c100100.000MGP_SPRETEiJ_G0018027Rab5c100100.000Mus_spretus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSMPUG00000010554RAB5C10098.611Mustela_putorius_furo
MGP_PahariEiJ_G0018314Rab5c10097.685ENSNGAG00000010286Rab5c10097.685Nannospalax_galili
MGP_PahariEiJ_G0018314Rab5c9690.047ENSNBRG00000016922-9989.498Neolamprologus_brichardi
MGP_PahariEiJ_G0018314Rab5c9988.889ENSNBRG00000018165rab5c9891.667Neolamprologus_brichardi
MGP_PahariEiJ_G0018314Rab5c8292.697ENSOPRG00000008255RAB5C10092.697Ochotona_princeps
MGP_PahariEiJ_G0018314Rab5c10097.222ENSODEG00000017920RAB5C10097.222Octodon_degus
MGP_PahariEiJ_G0018314Rab5c9988.889ENSONIG00000001113rab5c9892.130Oreochromis_niloticus
MGP_PahariEiJ_G0018314Rab5c10088.532ENSORLG00000003882rab5c10089.908Oryzias_latipes
MGP_PahariEiJ_G0018314Rab5c10089.450ENSORLG00020008388rab5c10089.450Oryzias_latipes_hni
MGP_PahariEiJ_G0018314Rab5c10088.532ENSORLG00015021900rab5c10089.908Oryzias_latipes_hsok
MGP_PahariEiJ_G0018314Rab5c10088.532ENSOMEG00000023078rab5c10089.908Oryzias_melastigma
MGP_PahariEiJ_G0018314Rab5c10098.611ENSOGAG00000009456RAB5C10098.611Otolemur_garnettii
MGP_PahariEiJ_G0018314Rab5c10098.611ENSOARG00000018768RAB5C10098.611Ovis_aries
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPPAG00000037206RAB5C10098.611Pan_paniscus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPPRG00000005745RAB5C10098.611Panthera_pardus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPTIG00000008177RAB5C10098.611Panthera_tigris_altaica
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPTRG00000009194RAB5C10098.611Pan_troglodytes
MGP_PahariEiJ_G0018314Rab5c9987.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
MGP_PahariEiJ_G0018314Rab5c9989.767ENSPKIG00000001237-9989.767Paramormyrops_kingsleyae
MGP_PahariEiJ_G0018314Rab5c9986.574ENSPMGG00000010792rab5c9790.521Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPEMG00000017971Rab5c10098.611Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018314Rab5c9978.829ENSPMAG00000000008rab5c10078.829Petromyzon_marinus
MGP_PahariEiJ_G0018314Rab5c9978.605ENSPMAG00000007867rab5c10078.605Petromyzon_marinus
MGP_PahariEiJ_G0018314Rab5c9979.535ENSPMAG00000001399rab5c10079.535Petromyzon_marinus
MGP_PahariEiJ_G0018314Rab5c10096.759ENSPCIG00000020225-10096.759Phascolarctos_cinereus
MGP_PahariEiJ_G0018314Rab5c9989.815ENSPLAG00000004790rab5c9891.667Poecilia_latipinna
MGP_PahariEiJ_G0018314Rab5c9990.783ENSPLAG00000016333-9990.783Poecilia_latipinna
MGP_PahariEiJ_G0018314Rab5c9989.815ENSPMEG00000011336rab5c9891.667Poecilia_mexicana
MGP_PahariEiJ_G0018314Rab5c9888.732ENSPMEG00000012614-9889.498Poecilia_mexicana
MGP_PahariEiJ_G0018314Rab5c9989.815ENSPREG00000010146rab5c9891.667Poecilia_reticulata
MGP_PahariEiJ_G0018314Rab5c8792.593ENSPREG00000022167-8993.989Poecilia_reticulata
MGP_PahariEiJ_G0018314Rab5c10098.611ENSPPYG00000008398RAB5C10098.611Pongo_abelii
MGP_PahariEiJ_G0018314Rab5c10097.685ENSPCAG00000016412RAB5C10097.685Procavia_capensis
MGP_PahariEiJ_G0018314Rab5c10097.685ENSPCOG00000026327RAB5C10097.685Propithecus_coquereli
MGP_PahariEiJ_G0018314Rab5c10099.074ENSPVAG00000003867RAB5C10099.074Pteropus_vampyrus
MGP_PahariEiJ_G0018314Rab5c9690.047ENSPNYG00000015851-9989.498Pundamilia_nyererei
MGP_PahariEiJ_G0018314Rab5c9987.963ENSPNYG00000010615rab5c9890.741Pundamilia_nyererei
MGP_PahariEiJ_G0018314Rab5c9787.264ENSPNAG00000002218-9989.623Pygocentrus_nattereri
MGP_PahariEiJ_G0018314Rab5c9991.244ENSPNAG00000028138rab5c9891.244Pygocentrus_nattereri
MGP_PahariEiJ_G0018314Rab5c10099.537ENSRNOG00000018568Rab5c10099.537Rattus_norvegicus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSRBIG00000031376RAB5C10098.611Rhinopithecus_bieti
MGP_PahariEiJ_G0018314Rab5c10098.611ENSRROG00000032895RAB5C10098.611Rhinopithecus_roxellana
MGP_PahariEiJ_G0018314Rab5c10099.074ENSSBOG00000032552-10099.074Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0018314Rab5c10097.222ENSSHAG00000005267-10097.222Sarcophilus_harrisii
MGP_PahariEiJ_G0018314Rab5c9987.558ENSSFOG00015009988-9987.558Scleropages_formosus
MGP_PahariEiJ_G0018314Rab5c9692.308ENSSMAG00000007323rab5c9890.278Scophthalmus_maximus
MGP_PahariEiJ_G0018314Rab5c9991.667ENSSDUG00000023008rab5c9891.667Seriola_dumerili
MGP_PahariEiJ_G0018314Rab5c9991.204ENSSLDG00000017771rab5c9891.204Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0018314Rab5c10095.833ENSSPUG00000012950-10095.833Sphenodon_punctatus
MGP_PahariEiJ_G0018314Rab5c9989.815ENSSPAG00000006436rab5c9892.593Stegastes_partitus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSSSCG00000032467RAB5C10098.611Sus_scrofa
MGP_PahariEiJ_G0018314Rab5c9987.963ENSTRUG00000015590rab5c9890.278Takifugu_rubripes
MGP_PahariEiJ_G0018314Rab5c9690.909ENSTNIG00000011711rab5c9590.909Tetraodon_nigroviridis
MGP_PahariEiJ_G0018314Rab5c10098.611ENSTBEG00000007092RAB5C10098.611Tupaia_belangeri
MGP_PahariEiJ_G0018314Rab5c10097.685ENSTTRG00000006673RAB5C10097.685Tursiops_truncatus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSUAMG00000024343RAB5C10098.611Ursus_americanus
MGP_PahariEiJ_G0018314Rab5c10098.611ENSUMAG00000023270RAB5C10098.611Ursus_maritimus
MGP_PahariEiJ_G0018314Rab5c9989.352ENSXCOG00000016788rab5c9891.667Xiphophorus_couchianus
MGP_PahariEiJ_G0018314Rab5c9692.381ENSXCOG00000006300-9989.140Xiphophorus_couchianus
MGP_PahariEiJ_G0018314Rab5c9991.244ENSXMAG00000022179-9991.244Xiphophorus_maculatus
MGP_PahariEiJ_G0018314Rab5c9989.815ENSXMAG00000003266rab5c9891.667Xiphophorus_maculatus

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