EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018356 (Gene tree)
Gene ID: 110332347
Gene Symbol: Rdm1
Alias: 2410008M22Rik|Rad52b
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 9254 bases
Position: chr14:69087683-69096936
Accession: 110332347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0036835	RRM_1	PF00076.22	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0036835	-	1112	XM_021213518	MGP_PahariEiJ_P0036835	281 (aa)	XP_021069177	UPI000A3070F6
MGP_PahariEiJ_T0036834	-	434	-	-	- (aa)	-	-
MGP_PahariEiJ_T0036837	-	845	-	MGP_PahariEiJ_P0036837	115 (aa)	-	-
MGP_PahariEiJ_T0036836	-	810	-	-	- (aa)	-	-
MGP_PahariEiJ_T0036838	-	416	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018356	Rdm1	99	72.535	ENSG00000278023	RDM1	99	82.836	Homo_sapiens
MGP_PahariEiJ_G0018356	Rdm1	63	36.757	ENSAPOG00000021886	zgc:103564	70	36.757	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0018356	Rdm1	88	33.992	ENSAPEG00000008929	zgc:103564	93	33.992	Amphiprion_percula
MGP_PahariEiJ_G0018356	Rdm1	90	50.781	ENSAPLG00000004384	RDM1	98	50.781	Anas_platyrhynchos
MGP_PahariEiJ_G0018356	Rdm1	97	44.643	ENSACAG00000012989	-	100	44.643	Anolis_carolinensis
MGP_PahariEiJ_G0018356	Rdm1	99	72.438	ENSANAG00000032752	RDM1	99	82.090	Aotus_nancymaae
MGP_PahariEiJ_G0018356	Rdm1	99	70.775	ENSBTAG00000000030	RDM1	99	70.775	Bos_taurus
MGP_PahariEiJ_G0018356	Rdm1	89	74.206	ENSCJAG00000015031	RDM1	96	84.962	Callithrix_jacchus
MGP_PahariEiJ_G0018356	Rdm1	88	64.844	ENSCAFG00000015160	-	100	64.844	Canis_familiaris
MGP_PahariEiJ_G0018356	Rdm1	99	71.174	ENSCHIG00000020607	RDM1	99	71.174	Capra_hircus
MGP_PahariEiJ_G0018356	Rdm1	99	67.021	ENSCPOG00000001495	-	98	67.021	Cavia_porcellus
MGP_PahariEiJ_G0018356	Rdm1	96	72.059	ENSCCAG00000035763	RDM1	99	82.836	Cebus_capucinus
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSCATG00000044451	RDM1	99	83.704	Cercocebus_atys
MGP_PahariEiJ_G0018356	Rdm1	93	71.805	ENSCSAG00000006209	RDM1	99	71.805	Chlorocebus_sabaeus
MGP_PahariEiJ_G0018356	Rdm1	80	49.782	ENSCPBG00000009105	RDM1	97	48.627	Chrysemys_picta_bellii
MGP_PahariEiJ_G0018356	Rdm1	99	72.535	ENSCANG00000041322	RDM1	99	82.222	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0018356	Rdm1	96	82.900	ENSCGRG00001015927	Rdm1	99	82.857	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018356	Rdm1	89	32.411	ENSCVAG00000001956	zgc:103564	98	33.096	Cyprinodon_variegatus
MGP_PahariEiJ_G0018356	Rdm1	88	74.400	ENSDNOG00000045224	-	93	74.400	Dasypus_novemcinctus
MGP_PahariEiJ_G0018356	Rdm1	70	70.588	ENSEASG00005010554	RDM1	71	70.588	Equus_asinus_asinus
MGP_PahariEiJ_G0018356	Rdm1	89	72.941	ENSECAG00000022182	RDM1	91	72.941	Equus_caballus
MGP_PahariEiJ_G0018356	Rdm1	87	68.826	ENSEEUG00000006127	RDM1	98	68.826	Erinaceus_europaeus
MGP_PahariEiJ_G0018356	Rdm1	80	74.449	ENSFCAG00000043429	RDM1	96	84.962	Felis_catus
MGP_PahariEiJ_G0018356	Rdm1	97	52.555	ENSGALG00000000243	RDM1	97	52.555	Gallus_gallus
MGP_PahariEiJ_G0018356	Rdm1	90	49.808	ENSGAGG00000000293	-	82	49.808	Gopherus_agassizii
MGP_PahariEiJ_G0018356	Rdm1	99	72.887	ENSGGOG00000010584	RDM1	99	82.836	Gorilla_gorilla
MGP_PahariEiJ_G0018356	Rdm1	98	33.935	ENSHCOG00000002518	-	99	34.050	Hippocampus_comes
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSSTOG00000022491	RDM1	99	73.944	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018356	Rdm1	99	68.662	ENSLAFG00000029300	RDM1	99	68.662	Loxodonta_africana
MGP_PahariEiJ_G0018356	Rdm1	99	73.592	ENSMFAG00000032968	RDM1	99	83.704	Macaca_fascicularis
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSMMUG00000006847	RDM1	99	83.704	Macaca_mulatta
MGP_PahariEiJ_G0018356	Rdm1	99	73.592	ENSMNEG00000039977	RDM1	99	83.704	Macaca_nemestrina
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSMLEG00000041158	RDM1	99	83.704	Mandrillus_leucophaeus
MGP_PahariEiJ_G0018356	Rdm1	91	50.388	ENSMGAG00000008774	RDM1	96	52.479	Meleagris_gallopavo
MGP_PahariEiJ_G0018356	Rdm1	100	82.918	ENSMAUG00000018559	Rdm1	100	82.918	Mesocricetus_auratus
MGP_PahariEiJ_G0018356	Rdm1	99	73.145	ENSMICG00000038651	RDM1	99	73.145	Microcebus_murinus
MGP_PahariEiJ_G0018356	Rdm1	97	79.853	ENSMOCG00000015095	Rdm1	99	79.853	Microtus_ochrogaster
MGP_PahariEiJ_G0018356	Rdm1	97	60.507	ENSMODG00000011101	RDM1	100	60.507	Monodelphis_domestica
MGP_PahariEiJ_G0018356	Rdm1	100	93.950	MGP_CAROLIEiJ_G0017226	Rdm1	100	93.950	Mus_caroli
MGP_PahariEiJ_G0018356	Rdm1	100	93.238	ENSMUSG00000010362	Rdm1	100	93.238	Mus_musculus
MGP_PahariEiJ_G0018356	Rdm1	100	94.306	MGP_SPRETEiJ_G0018069	Rdm1	100	94.306	Mus_spretus
MGP_PahariEiJ_G0018356	Rdm1	99	73.333	ENSMPUG00000008363	RDM1	99	73.333	Mustela_putorius_furo
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSNLEG00000014173	RDM1	99	83.704	Nomascus_leucogenys
MGP_PahariEiJ_G0018356	Rdm1	88	60.558	ENSMEUG00000015826	RDM1	100	60.558	Notamacropus_eugenii
MGP_PahariEiJ_G0018356	Rdm1	89	69.565	ENSOCUG00000022704	RDM1	97	69.565	Oryctolagus_cuniculus
MGP_PahariEiJ_G0018356	Rdm1	100	71.127	ENSOGAG00000011332	RDM1	100	71.127	Otolemur_garnettii
MGP_PahariEiJ_G0018356	Rdm1	99	73.239	ENSPPAG00000029969	RDM1	99	73.239	Pan_paniscus
MGP_PahariEiJ_G0018356	Rdm1	99	73.592	ENSPTRG00000009031	RDM1	99	83.582	Pan_troglodytes
MGP_PahariEiJ_G0018356	Rdm1	99	73.944	ENSPANG00000022933	RDM1	99	83.704	Papio_anubis
MGP_PahariEiJ_G0018356	Rdm1	96	82.528	ENSPEMG00000018985	Rdm1	100	81.851	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018356	Rdm1	99	72.183	ENSPPYG00000008198	RDM1	99	72.183	Pongo_abelii
MGP_PahariEiJ_G0018356	Rdm1	99	71.025	ENSPCOG00000017995	RDM1	96	80.451	Propithecus_coquereli
MGP_PahariEiJ_G0018356	Rdm1	88	72.510	ENSPVAG00000001116	RDM1	100	72.510	Pteropus_vampyrus
MGP_PahariEiJ_G0018356	Rdm1	100	93.238	ENSRNOG00000020751	Rdm1	100	93.238	Rattus_norvegicus
MGP_PahariEiJ_G0018356	Rdm1	99	72.183	ENSRBIG00000030000	RDM1	99	82.963	Rhinopithecus_bieti
MGP_PahariEiJ_G0018356	Rdm1	99	72.535	ENSRROG00000035242	RDM1	99	82.963	Rhinopithecus_roxellana
MGP_PahariEiJ_G0018356	Rdm1	97	63.406	ENSSHAG00000013584	RDM1	100	63.406	Sarcophilus_harrisii
MGP_PahariEiJ_G0018356	Rdm1	91	49.810	ENSSPUG00000010941	RDM1	94	49.810	Sphenodon_punctatus
MGP_PahariEiJ_G0018356	Rdm1	93	30.943	ENSSPAG00000011690	-	95	31.321	Stegastes_partitus
MGP_PahariEiJ_G0018356	Rdm1	87	59.756	ENSSSCG00000017574	-	93	66.368	Sus_scrofa
MGP_PahariEiJ_G0018356	Rdm1	86	58.607	ENSTBEG00000010030	RDM1	97	58.607	Tupaia_belangeri
MGP_PahariEiJ_G0018356	Rdm1	99	75.088	ENSUAMG00000027279	RDM1	99	75.088	Ursus_americanus
MGP_PahariEiJ_G0018356	Rdm1	99	75.088	ENSUMAG00000015423	RDM1	98	75.088	Ursus_maritimus