EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018499 (Gene tree)
Gene ID: 110332573
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 13956 bases
Position: chr14:80924541-80938496
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0037506	zf-CCCH	PF00642.24	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0037503	-	1232	-	MGP_PahariEiJ_P0037503	190 (aa)	-	-
MGP_PahariEiJ_T0037506	-	1126	-	MGP_PahariEiJ_P0037506	153 (aa)	-	-
MGP_PahariEiJ_T0037507	-	950	-	-	- (aa)	-	-
MGP_PahariEiJ_T0037504	-	1393	-	MGP_PahariEiJ_P0037504	285 (aa)	-	-
MGP_PahariEiJ_T0037505	-	1215	-	MGP_PahariEiJ_P0037505	228 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0018499	-	77	66.102	MGP_PahariEiJ_G0024581	Cpsf4	56	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018499	-	81	69.355	ENSG00000187959	CPSF4L	68	75.728	Homo_sapiens
MGP_PahariEiJ_G0018499	-	75	48.696	ENSANAG00000026558	-	75	48.696	Aotus_nancymaae
MGP_PahariEiJ_G0018499	-	82	56.000	ENSCJAG00000019911	CPSF4L	75	60.748	Callithrix_jacchus
MGP_PahariEiJ_G0018499	-	82	68.800	ENSCATG00000044555	CPSF4L	80	73.148	Cercocebus_atys
MGP_PahariEiJ_G0018499	-	80	69.919	ENSCSAG00000004429	CPSF4L	68	69.919	Chlorocebus_sabaeus
MGP_PahariEiJ_G0018499	-	82	68.800	ENSCANG00000035042	CPSF4L	67	73.148	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0018499	-	82	82.400	ENSCGRG00001020079	Cpsf4l	69	82.400	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018499	-	82	82.400	ENSCGRG00000010419	Cpsf4l	69	82.400	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018499	-	75	74.783	ENSDNOG00000014458	CPSF4L	82	73.786	Dasypus_novemcinctus
MGP_PahariEiJ_G0018499	-	75	73.684	ENSEASG00005018763	CPSF4L	68	73.684	Equus_asinus_asinus
MGP_PahariEiJ_G0018499	-	75	73.684	ENSECAG00000024813	CPSF4L	68	73.684	Equus_caballus
MGP_PahariEiJ_G0018499	-	92	60.274	ENSGGOG00000026659	CPSF4L	96	60.274	Gorilla_gorilla
MGP_PahariEiJ_G0018499	-	73	76.786	ENSSTOG00000001849	CPSF4L	64	76.786	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018499	-	76	72.650	ENSLAFG00000010697	CPSF4L	66	72.650	Loxodonta_africana
MGP_PahariEiJ_G0018499	-	82	68.800	ENSMFAG00000037840	CPSF4L	77	73.148	Macaca_fascicularis
MGP_PahariEiJ_G0018499	-	82	68.800	ENSMMUG00000001271	CPSF4L	77	73.148	Macaca_mulatta
MGP_PahariEiJ_G0018499	-	82	68.800	ENSMNEG00000045419	CPSF4L	77	73.148	Macaca_nemestrina
MGP_PahariEiJ_G0018499	-	82	68.800	ENSMLEG00000038527	CPSF4L	77	74.074	Mandrillus_leucophaeus
MGP_PahariEiJ_G0018499	-	75	84.348	ENSMAUG00000019519	-	69	84.348	Mesocricetus_auratus
MGP_PahariEiJ_G0018499	-	73	75.893	ENSMICG00000007503	CPSF4L	64	75.893	Microcebus_murinus
MGP_PahariEiJ_G0018499	-	54	81.707	ENSMOCG00000015313	-	57	81.707	Microtus_ochrogaster
MGP_PahariEiJ_G0018499	-	73	71.429	ENSMODG00000025672	CPSF4L	69	71.429	Monodelphis_domestica
MGP_PahariEiJ_G0018499	-	90	87.591	MGP_CAROLIEiJ_G0017369	-	82	92.857	Mus_caroli
MGP_PahariEiJ_G0018499	-	82	92.063	ENSMUSG00000018727	Cpsf4l	82	92.063	Mus_musculus
MGP_PahariEiJ_G0018499	-	82	93.651	MGP_SPRETEiJ_G0018215	-	82	93.651	Mus_spretus
MGP_PahariEiJ_G0018499	-	77	71.186	ENSMPUG00000014276	CPSF4L	70	71.186	Mustela_putorius_furo
MGP_PahariEiJ_G0018499	-	75	71.930	ENSMLUG00000009617	CPSF4L	63	71.930	Myotis_lucifugus
MGP_PahariEiJ_G0018499	-	73	86.607	ENSNGAG00000009325	-	65	86.607	Nannospalax_galili
MGP_PahariEiJ_G0018499	-	81	70.161	ENSNLEG00000001420	CPSF4L	70	74.766	Nomascus_leucogenys
MGP_PahariEiJ_G0018499	-	66	70.297	ENSMEUG00000004051	-	99	70.297	Notamacropus_eugenii
MGP_PahariEiJ_G0018499	-	74	66.372	ENSOPRG00000007484	-	83	66.372	Ochotona_princeps
MGP_PahariEiJ_G0018499	-	89	62.590	ENSOCUG00000026495	CPSF4L	62	62.590	Oryctolagus_cuniculus
MGP_PahariEiJ_G0018499	-	92	59.589	ENSPPAG00000037000	-	96	59.589	Pan_paniscus
MGP_PahariEiJ_G0018499	-	67	75.728	ENSPPRG00000001058	CPSF4L	67	75.728	Panthera_pardus
MGP_PahariEiJ_G0018499	-	67	75.728	ENSPTIG00000012676	CPSF4L	67	75.728	Panthera_tigris_altaica
MGP_PahariEiJ_G0018499	-	92	58.784	ENSPTRG00000009598	CPSF4L	96	58.784	Pan_troglodytes
MGP_PahariEiJ_G0018499	-	82	68.800	ENSPANG00000020331	CPSF4L	70	73.832	Papio_anubis
MGP_PahariEiJ_G0018499	-	81	81.452	ENSPEMG00000011680	Cpsf4l	81	81.452	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018499	-	75	71.053	ENSPCIG00000001889	CPSF4L	66	71.053	Phascolarctos_cinereus
MGP_PahariEiJ_G0018499	-	92	60.690	ENSPPYG00000008589	-	95	60.690	Pongo_abelii
MGP_PahariEiJ_G0018499	-	71	75.229	ENSPCOG00000021801	CPSF4L	73	72.897	Propithecus_coquereli
MGP_PahariEiJ_G0018499	-	86	60.606	ENSPVAG00000006736	CPSF4L	88	60.606	Pteropus_vampyrus
MGP_PahariEiJ_G0018499	-	82	68.800	ENSRBIG00000029048	CPSF4L	69	71.429	Rhinopithecus_bieti
MGP_PahariEiJ_G0018499	-	82	67.200	ENSRROG00000037051	CPSF4L	69	67.200	Rhinopithecus_roxellana
MGP_PahariEiJ_G0018499	-	56	71.765	ENSTBEG00000012716	-	94	71.765	Tupaia_belangeri
MGP_PahariEiJ_G0018499	-	70	75.701	ENSTTRG00000005243	CPSF4L	71	75.701	Tursiops_truncatus
MGP_PahariEiJ_G0018499	-	53	76.543	ENSUAMG00000007728	CPSF4L	52	76.543	Ursus_americanus
MGP_PahariEiJ_G0018499	-	53	76.543	ENSUMAG00000007869	CPSF4L	52	76.543	Ursus_maritimus