EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018547 (Gene tree)
Gene ID: 110332256
Gene Symbol: Tsen54
Alias: 0610034P02Rik
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 7997 bases
Position: chr14:82972558-82980554
Accession: 110332256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0037727	tRNA_int_end_N2	PF12928.7	9.7e-19	1	1
MGP_PahariEiJ_P0037726	tRNA_int_end_N2	PF12928.7	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0037726	-	2005	-	MGP_PahariEiJ_P0037726	525 (aa)	XP_021069037	UPI000A312535
MGP_PahariEiJ_T0037727	-	1888	-	MGP_PahariEiJ_P0037727	486 (aa)	-	-
MGP_PahariEiJ_T0037731	-	825	-	MGP_PahariEiJ_P0037731	275 (aa)	-	-
MGP_PahariEiJ_T0037730	-	804	-	-	- (aa)	-	-
MGP_PahariEiJ_T0037733	-	471	-	MGP_PahariEiJ_P0037733	156 (aa)	-	-
MGP_PahariEiJ_T0037732	-	989	-	MGP_PahariEiJ_P0037732	153 (aa)	-	-
MGP_PahariEiJ_T0037728	-	522	-	-	- (aa)	-	-
MGP_PahariEiJ_T0037729	-	858	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018547	Tsen54	100	80.228	ENSG00000182173	TSEN54	99	88.732	Homo_sapiens
MGP_PahariEiJ_G0018547	Tsen54	97	48.438	ENSAPOG00000009659	tsen54	99	46.136	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0018547	Tsen54	99	76.038	ENSAMEG00000009414	TSEN54	99	76.604	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0018547	Tsen54	97	46.979	ENSAOCG00000000152	tsen54	95	46.979	Amphiprion_ocellaris
MGP_PahariEiJ_G0018547	Tsen54	97	46.784	ENSAPEG00000018931	tsen54	94	46.784	Amphiprion_percula
MGP_PahariEiJ_G0018547	Tsen54	97	44.146	ENSATEG00000019860	tsen54	97	44.636	Anabas_testudineus
MGP_PahariEiJ_G0018547	Tsen54	86	51.844	ENSAPLG00000009419	TSEN54	100	51.844	Anas_platyrhynchos
MGP_PahariEiJ_G0018547	Tsen54	99	52.562	ENSACAG00000006714	TSEN54	99	52.562	Anolis_carolinensis
MGP_PahariEiJ_G0018547	Tsen54	99	79.576	ENSANAG00000024061	TSEN54	99	80.000	Aotus_nancymaae
MGP_PahariEiJ_G0018547	Tsen54	97	46.516	ENSACLG00000019800	tsen54	96	46.958	Astatotilapia_calliptera
MGP_PahariEiJ_G0018547	Tsen54	97	47.266	ENSAMXG00000006546	tsen54	96	47.266	Astyanax_mexicanus
MGP_PahariEiJ_G0018547	Tsen54	100	78.868	ENSBTAG00000000824	TSEN54	100	79.661	Bos_taurus
MGP_PahariEiJ_G0018547	Tsen54	99	77.842	ENSCJAG00000014278	TSEN54	99	78.286	Callithrix_jacchus
MGP_PahariEiJ_G0018547	Tsen54	100	78.343	ENSCAFG00000004798	TSEN54	100	78.908	Canis_familiaris
MGP_PahariEiJ_G0018547	Tsen54	100	78.343	ENSCAFG00020000312	TSEN54	100	78.908	Canis_lupus_dingo
MGP_PahariEiJ_G0018547	Tsen54	100	79.238	ENSCHIG00000019908	TSEN54	100	79.238	Capra_hircus
MGP_PahariEiJ_G0018547	Tsen54	86	75.165	ENSTSYG00000037439	TSEN54	100	75.824	Carlito_syrichta
MGP_PahariEiJ_G0018547	Tsen54	99	78.420	ENSCCAG00000036624	TSEN54	99	78.476	Cebus_capucinus
MGP_PahariEiJ_G0018547	Tsen54	97	79.883	ENSCATG00000042877	TSEN54	99	80.000	Cercocebus_atys
MGP_PahariEiJ_G0018547	Tsen54	97	81.213	ENSCLAG00000002924	TSEN54	99	81.107	Chinchilla_lanigera
MGP_PahariEiJ_G0018547	Tsen54	100	79.278	ENSCSAG00000004809	TSEN54	100	79.658	Chlorocebus_sabaeus
MGP_PahariEiJ_G0018547	Tsen54	99	55.784	ENSCPBG00000028071	TSEN54	99	55.784	Chrysemys_picta_bellii
MGP_PahariEiJ_G0018547	Tsen54	100	79.278	ENSCANG00000028053	TSEN54	100	79.278	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0018547	Tsen54	100	88.952	ENSCGRG00001020029	Tsen54	100	88.952	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018547	Tsen54	84	87.557	ENSCGRG00000016289	Tsen54	100	87.557	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018547	Tsen54	80	39.171	ENSCSEG00000020586	tsen54	99	39.171	Cynoglossus_semilaevis
MGP_PahariEiJ_G0018547	Tsen54	80	42.317	ENSDARG00000036844	tsen54	99	43.499	Danio_rerio
MGP_PahariEiJ_G0018547	Tsen54	100	73.823	ENSDNOG00000018452	TSEN54	100	75.895	Dasypus_novemcinctus
MGP_PahariEiJ_G0018547	Tsen54	100	81.524	ENSDORG00000004073	Tsen54	100	81.524	Dipodomys_ordii
MGP_PahariEiJ_G0018547	Tsen54	97	36.654	ENSEBUG00000005203	TSEN54	95	36.654	Eptatretus_burgeri
MGP_PahariEiJ_G0018547	Tsen54	100	78.491	ENSEASG00005000579	TSEN54	100	78.491	Equus_asinus_asinus
MGP_PahariEiJ_G0018547	Tsen54	100	78.679	ENSECAG00000004924	TSEN54	100	78.679	Equus_caballus
MGP_PahariEiJ_G0018547	Tsen54	86	71.554	ENSEEUG00000008467	TSEN54	100	71.991	Erinaceus_europaeus
MGP_PahariEiJ_G0018547	Tsen54	97	43.358	ENSELUG00000017703	tsen54	90	43.358	Esox_lucius
MGP_PahariEiJ_G0018547	Tsen54	99	78.220	ENSFCAG00000023712	TSEN54	99	78.788	Felis_catus
MGP_PahariEiJ_G0018547	Tsen54	94	52.705	ENSFALG00000001119	TSEN54	98	51.032	Ficedula_albicollis
MGP_PahariEiJ_G0018547	Tsen54	86	79.733	ENSFDAG00000019090	TSEN54	99	79.733	Fukomys_damarensis
MGP_PahariEiJ_G0018547	Tsen54	97	47.868	ENSFHEG00000005470	tsen54	96	48.062	Fundulus_heteroclitus
MGP_PahariEiJ_G0018547	Tsen54	76	46.429	ENSGMOG00000013146	tsen54	92	46.429	Gadus_morhua
MGP_PahariEiJ_G0018547	Tsen54	95	49.012	ENSGALG00000047163	TSEN54	98	49.012	Gallus_gallus
MGP_PahariEiJ_G0018547	Tsen54	99	46.476	ENSGAFG00000005111	tsen54	99	46.286	Gambusia_affinis
MGP_PahariEiJ_G0018547	Tsen54	96	44.788	ENSGACG00000014987	tsen54	99	44.788	Gasterosteus_aculeatus
MGP_PahariEiJ_G0018547	Tsen54	100	55.121	ENSGAGG00000006825	TSEN54	99	55.121	Gopherus_agassizii
MGP_PahariEiJ_G0018547	Tsen54	97	79.528	ENSGGOG00000009417	TSEN54	100	79.921	Gorilla_gorilla
MGP_PahariEiJ_G0018547	Tsen54	87	44.813	ENSHBUG00000018296	tsen54	99	39.631	Haplochromis_burtoni
MGP_PahariEiJ_G0018547	Tsen54	100	81.524	ENSHGLG00000007979	TSEN54	100	81.524	Heterocephalus_glaber_female
MGP_PahariEiJ_G0018547	Tsen54	100	80.571	ENSHGLG00100005497	TSEN54	100	80.571	Heterocephalus_glaber_male
MGP_PahariEiJ_G0018547	Tsen54	80	41.844	ENSHCOG00000007481	tsen54	99	41.844	Hippocampus_comes
MGP_PahariEiJ_G0018547	Tsen54	99	42.724	ENSIPUG00000000590	tsen54	99	42.724	Ictalurus_punctatus
MGP_PahariEiJ_G0018547	Tsen54	100	78.286	ENSSTOG00000012883	TSEN54	100	78.286	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0018547	Tsen54	100	81.973	ENSJJAG00000007365	Tsen54	100	81.973	Jaculus_jaculus
MGP_PahariEiJ_G0018547	Tsen54	97	46.212	ENSKMAG00000006944	tsen54	97	46.212	Kryptolebias_marmoratus
MGP_PahariEiJ_G0018547	Tsen54	97	42.804	ENSLBEG00000004199	tsen54	97	43.178	Labrus_bergylta
MGP_PahariEiJ_G0018547	Tsen54	97	46.198	ENSLACG00000009497	TSEN54	100	46.198	Latimeria_chalumnae
MGP_PahariEiJ_G0018547	Tsen54	98	47.238	ENSLOCG00000011191	tsen54	97	48.356	Lepisosteus_oculatus
MGP_PahariEiJ_G0018547	Tsen54	99	73.346	ENSLAFG00000011655	TSEN54	99	73.346	Loxodonta_africana
MGP_PahariEiJ_G0018547	Tsen54	100	79.468	ENSMFAG00000000712	TSEN54	100	79.848	Macaca_fascicularis
MGP_PahariEiJ_G0018547	Tsen54	100	79.278	ENSMNEG00000029199	TSEN54	100	79.658	Macaca_nemestrina
MGP_PahariEiJ_G0018547	Tsen54	86	78.097	ENSMLEG00000044168	TSEN54	88	78.540	Mandrillus_leucophaeus
MGP_PahariEiJ_G0018547	Tsen54	98	44.742	ENSMAMG00000019773	tsen54	98	44.981	Mastacembelus_armatus
MGP_PahariEiJ_G0018547	Tsen54	97	46.516	ENSMZEG00005000884	tsen54	96	46.958	Maylandia_zebra
MGP_PahariEiJ_G0018547	Tsen54	99	49.434	ENSMGAG00000009556	TSEN54	99	49.434	Meleagris_gallopavo
MGP_PahariEiJ_G0018547	Tsen54	100	88.683	ENSMAUG00000016838	Tsen54	100	88.683	Mesocricetus_auratus
MGP_PahariEiJ_G0018547	Tsen54	100	77.947	ENSMICG00000044012	TSEN54	100	78.707	Microcebus_murinus
MGP_PahariEiJ_G0018547	Tsen54	100	88.952	ENSMOCG00000021585	Tsen54	100	88.952	Microtus_ochrogaster
MGP_PahariEiJ_G0018547	Tsen54	96	42.126	ENSMMOG00000020189	tsen54	99	43.418	Mola_mola
MGP_PahariEiJ_G0018547	Tsen54	98	65.047	ENSMODG00000007438	TSEN54	98	65.009	Monodelphis_domestica
MGP_PahariEiJ_G0018547	Tsen54	97	43.585	ENSMALG00000020573	tsen54	97	44.381	Monopterus_albus
MGP_PahariEiJ_G0018547	Tsen54	100	94.856	MGP_CAROLIEiJ_G0017417	Tsen54	100	94.856	Mus_caroli
MGP_PahariEiJ_G0018547	Tsen54	100	95.679	ENSMUSG00000020781	Tsen54	100	95.679	Mus_musculus
MGP_PahariEiJ_G0018547	Tsen54	100	95.885	MGP_SPRETEiJ_G0018262	Tsen54	100	95.885	Mus_spretus
MGP_PahariEiJ_G0018547	Tsen54	100	76.836	ENSMPUG00000013870	TSEN54	100	77.213	Mustela_putorius_furo
MGP_PahariEiJ_G0018547	Tsen54	100	74.765	ENSMLUG00000015298	TSEN54	100	75.330	Myotis_lucifugus
MGP_PahariEiJ_G0018547	Tsen54	100	84.979	ENSNGAG00000015673	Tsen54	100	84.979	Nannospalax_galili
MGP_PahariEiJ_G0018547	Tsen54	89	62.025	ENSMEUG00000011908	TSEN54	100	62.025	Notamacropus_eugenii
MGP_PahariEiJ_G0018547	Tsen54	100	73.245	ENSOPRG00000012513	TSEN54	100	73.245	Ochotona_princeps
MGP_PahariEiJ_G0018547	Tsen54	97	46.628	ENSONIG00000009543	tsen54	96	46.628	Oreochromis_niloticus
MGP_PahariEiJ_G0018547	Tsen54	99	70.544	ENSOCUG00000009875	TSEN54	99	71.670	Oryctolagus_cuniculus
MGP_PahariEiJ_G0018547	Tsen54	97	45.168	ENSORLG00000000852	tsen54	97	45.168	Oryzias_latipes
MGP_PahariEiJ_G0018547	Tsen54	97	45.168	ENSORLG00020018221	tsen54	97	44.970	Oryzias_latipes_hni
MGP_PahariEiJ_G0018547	Tsen54	97	44.970	ENSORLG00015009413	tsen54	98	44.773	Oryzias_latipes_hsok
MGP_PahariEiJ_G0018547	Tsen54	97	45.168	ENSOMEG00000014402	tsen54	94	45.168	Oryzias_melastigma
MGP_PahariEiJ_G0018547	Tsen54	100	74.335	ENSOGAG00000001442	TSEN54	100	74.335	Otolemur_garnettii
MGP_PahariEiJ_G0018547	Tsen54	86	73.904	ENSOARG00000010361	TSEN54	100	74.836	Ovis_aries
MGP_PahariEiJ_G0018547	Tsen54	94	79.234	ENSPPAG00000043519	TSEN54	100	79.234	Pan_paniscus
MGP_PahariEiJ_G0018547	Tsen54	99	78.030	ENSPPRG00000009162	TSEN54	99	78.598	Panthera_pardus
MGP_PahariEiJ_G0018547	Tsen54	86	76.770	ENSPTIG00000019312	TSEN54	96	77.212	Panthera_tigris_altaica
MGP_PahariEiJ_G0018547	Tsen54	100	80.038	ENSPTRG00000009646	TSEN54	100	80.418	Pan_troglodytes
MGP_PahariEiJ_G0018547	Tsen54	99	79.238	ENSPANG00000020133	TSEN54	99	79.619	Papio_anubis
MGP_PahariEiJ_G0018547	Tsen54	97	45.750	ENSPKIG00000023018	tsen54	100	45.786	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0018547	Tsen54	80	52.425	ENSPSIG00000012807	TSEN54	99	52.425	Pelodiscus_sinensis
MGP_PahariEiJ_G0018547	Tsen54	92	35.743	ENSPMGG00000019578	tsen54	99	35.743	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0018547	Tsen54	100	88.889	ENSPEMG00000014857	Tsen54	100	88.889	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0018547	Tsen54	99	46.591	ENSPFOG00000022740	tsen54	99	46.970	Poecilia_formosa
MGP_PahariEiJ_G0018547	Tsen54	99	45.966	ENSPLAG00000014847	tsen54	99	46.341	Poecilia_latipinna
MGP_PahariEiJ_G0018547	Tsen54	99	46.286	ENSPMEG00000022876	tsen54	99	46.667	Poecilia_mexicana
MGP_PahariEiJ_G0018547	Tsen54	99	45.574	ENSPREG00000013090	tsen54	99	45.951	Poecilia_reticulata
MGP_PahariEiJ_G0018547	Tsen54	91	74.322	ENSPPYG00000008629	TSEN54	100	74.530	Pongo_abelii
MGP_PahariEiJ_G0018547	Tsen54	95	67.589	ENSPCAG00000002093	TSEN54	99	67.589	Procavia_capensis
MGP_PahariEiJ_G0018547	Tsen54	99	79.350	ENSPCOG00000027880	TSEN54	99	80.115	Propithecus_coquereli
MGP_PahariEiJ_G0018547	Tsen54	100	79.284	ENSPVAG00000008446	TSEN54	100	79.284	Pteropus_vampyrus
MGP_PahariEiJ_G0018547	Tsen54	92	45.709	ENSPNYG00000010217	tsen54	99	46.169	Pundamilia_nyererei
MGP_PahariEiJ_G0018547	Tsen54	97	44.256	ENSPNAG00000003770	tsen54	97	44.256	Pygocentrus_nattereri
MGP_PahariEiJ_G0018547	Tsen54	100	92.571	ENSRNOG00000004598	Tsen54	100	92.571	Rattus_norvegicus
MGP_PahariEiJ_G0018547	Tsen54	100	79.468	ENSRBIG00000043040	TSEN54	100	79.468	Rhinopithecus_bieti
MGP_PahariEiJ_G0018547	Tsen54	100	79.278	ENSRROG00000030797	TSEN54	100	79.278	Rhinopithecus_roxellana
MGP_PahariEiJ_G0018547	Tsen54	99	75.048	ENSSBOG00000013543	TSEN54	99	75.429	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0018547	Tsen54	99	64.991	ENSSHAG00000018127	TSEN54	98	64.991	Sarcophilus_harrisii
MGP_PahariEiJ_G0018547	Tsen54	81	43.448	ENSSFOG00015004093	tsen54	100	43.678	Scleropages_formosus
MGP_PahariEiJ_G0018547	Tsen54	97	38.026	ENSSMAG00000012449	tsen54	99	43.494	Scophthalmus_maximus
MGP_PahariEiJ_G0018547	Tsen54	97	45.627	ENSSDUG00000021506	tsen54	97	45.627	Seriola_dumerili
MGP_PahariEiJ_G0018547	Tsen54	97	46.008	ENSSLDG00000016303	tsen54	97	46.008	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0018547	Tsen54	86	51.408	ENSSPUG00000008988	TSEN54	100	50.790	Sphenodon_punctatus
MGP_PahariEiJ_G0018547	Tsen54	92	45.808	ENSSPAG00000008098	-	99	45.808	Stegastes_partitus
MGP_PahariEiJ_G0018547	Tsen54	80	41.784	ENSSPAG00000008047	tsen54	99	41.784	Stegastes_partitus
MGP_PahariEiJ_G0018547	Tsen54	100	77.589	ENSSSCG00000036852	TSEN54	100	78.154	Sus_scrofa
MGP_PahariEiJ_G0018547	Tsen54	86	51.844	ENSTGUG00000008548	TSEN54	100	51.844	Taeniopygia_guttata
MGP_PahariEiJ_G0018547	Tsen54	97	45.882	ENSTRUG00000004230	tsen54	96	46.078	Takifugu_rubripes
MGP_PahariEiJ_G0018547	Tsen54	77	62.088	ENSTNIG00000011281	tsen54	99	44.925	Tetraodon_nigroviridis
MGP_PahariEiJ_G0018547	Tsen54	86	76.201	ENSTTRG00000015828	TSEN54	100	76.638	Tursiops_truncatus
MGP_PahariEiJ_G0018547	Tsen54	81	74.651	ENSUAMG00000010045	TSEN54	100	74.651	Ursus_americanus
MGP_PahariEiJ_G0018547	Tsen54	84	74.831	ENSUMAG00000008979	TSEN54	100	75.506	Ursus_maritimus
MGP_PahariEiJ_G0018547	Tsen54	97	77.973	ENSVVUG00000011411	TSEN54	98	78.447	Vulpes_vulpes
MGP_PahariEiJ_G0018547	Tsen54	99	49.153	ENSXETG00000012532	tsen54	99	71.667	Xenopus_tropicalis
MGP_PahariEiJ_G0018547	Tsen54	97	42.436	ENSXCOG00000018245	tsen54	99	43.026	Xiphophorus_couchianus
MGP_PahariEiJ_G0018547	Tsen54	99	46.183	ENSXMAG00000018818	tsen54	99	46.565	Xiphophorus_maculatus