EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0018656 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 4010 bases
Position: chr14:87735120-87739129
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0038288	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0038288	-	1321	-	MGP_PahariEiJ_P0038288	189 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0018656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0018656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0018656	-	99	100.000	MGP_PahariEiJ_G0018655	-	74	100.000
MGP_PahariEiJ_G0018656	-	99	68.617	MGP_PahariEiJ_G0027254	-	76	67.553
MGP_PahariEiJ_G0018656	-	99	68.617	MGP_PahariEiJ_G0027255	-	74	67.553

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0018656	-	99	97.354	ENSG00000183684	ALYREF	72	97.354	Homo_sapiens
MGP_PahariEiJ_G0018656	-	99	75.000	ENSAPOG00000018455	ALYREF	73	75.980	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0018656	-	73	92.029	ENSACAG00000010526	ALYREF	55	91.549	Anolis_carolinensis
MGP_PahariEiJ_G0018656	-	99	80.423	ENSANAG00000028229	-	58	82.011	Aotus_nancymaae
MGP_PahariEiJ_G0018656	-	62	96.581	ENSANAG00000022638	-	51	94.215	Aotus_nancymaae
MGP_PahariEiJ_G0018656	-	99	97.884	ENSBTAG00000008498	ALYREF	74	97.884	Bos_taurus
MGP_PahariEiJ_G0018656	-	99	96.825	ENSCJAG00000039942	ALYREF	95	92.179	Callithrix_jacchus
MGP_PahariEiJ_G0018656	-	99	96.825	ENSCAFG00000005877	ALYREF	74	96.825	Canis_familiaris
MGP_PahariEiJ_G0018656	-	99	96.825	ENSCAFG00020009815	ALYREF	74	96.825	Canis_lupus_dingo
MGP_PahariEiJ_G0018656	-	99	97.884	ENSCHIG00000017396	ALYREF	71	97.884	Capra_hircus
MGP_PahariEiJ_G0018656	-	99	97.354	ENSCPOG00000013710	ALYREF	74	97.354	Cavia_porcellus
MGP_PahariEiJ_G0018656	-	99	74.468	ENSCCAG00000030237	-	87	74.444	Cebus_capucinus
MGP_PahariEiJ_G0018656	-	99	97.354	ENSCCAG00000020578	-	95	92.737	Cebus_capucinus
MGP_PahariEiJ_G0018656	-	99	97.354	ENSCATG00000033169	ALYREF	95	92.737	Cercocebus_atys
MGP_PahariEiJ_G0018656	-	99	86.170	ENSCLAG00000015026	ALYREF	71	86.170	Chinchilla_lanigera
MGP_PahariEiJ_G0018656	-	99	97.354	ENSCSAG00000002216	ALYREF	72	97.354	Chlorocebus_sabaeus
MGP_PahariEiJ_G0018656	-	62	97.436	ENSCANG00000034056	ALYREF	86	77.857	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0018656	-	99	97.872	ENSCGRG00001018191	-	74	97.872	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0018656	-	61	99.130	ENSCGRG00000015871	-	57	98.246	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0018656	-	96	56.842	ENSCSEG00000015438	-	96	53.535	Cynoglossus_semilaevis
MGP_PahariEiJ_G0018656	-	60	99.123	ENSDNOG00000002563	ALYREF	70	78.313	Dasypus_novemcinctus
MGP_PahariEiJ_G0018656	-	60	100.000	ENSETEG00000016596	ALYREF	65	100.000	Echinops_telfairi
MGP_PahariEiJ_G0018656	-	99	97.354	ENSEASG00005005824	ALYREF	70	97.354	Equus_asinus_asinus
MGP_PahariEiJ_G0018656	-	99	97.354	ENSECAG00000018754	ALYREF	70	97.354	Equus_caballus
MGP_PahariEiJ_G0018656	-	88	93.452	ENSEEUG00000010164	ALYREF	98	93.452	Erinaceus_europaeus
MGP_PahariEiJ_G0018656	-	99	97.884	ENSFCAG00000022549	ALYREF	72	97.884	Felis_catus
MGP_PahariEiJ_G0018656	-	76	86.713	ENSFDAG00000001213	ALYREF	70	82.667	Fukomys_damarensis
MGP_PahariEiJ_G0018656	-	99	82.105	ENSGALG00000007237	ALYREF	73	82.632	Gallus_gallus
MGP_PahariEiJ_G0018656	-	99	76.289	ENSGACG00000013328	ALYREF	73	77.320	Gasterosteus_aculeatus
MGP_PahariEiJ_G0018656	-	99	81.771	ENSGAGG00000008536	ALYREF	73	81.250	Gopherus_agassizii
MGP_PahariEiJ_G0018656	-	99	97.884	ENSGGOG00000013935	ALYREF	95	93.296	Gorilla_gorilla
MGP_PahariEiJ_G0018656	-	99	97.326	ENSHGLG00000008293	ALYREF	95	93.258	Heterocephalus_glaber_female
MGP_PahariEiJ_G0018656	-	75	77.500	ENSHGLG00100006949	ALYREF	58	86.667	Heterocephalus_glaber_male
MGP_PahariEiJ_G0018656	-	99	71.282	ENSHCOG00000015046	ALYREF	73	75.500	Hippocampus_comes
MGP_PahariEiJ_G0018656	-	99	96.825	ENSJJAG00000004134	-	74	96.825	Jaculus_jaculus
MGP_PahariEiJ_G0018656	-	99	76.289	ENSLACG00000005694	ALYREF	73	77.320	Latimeria_chalumnae
MGP_PahariEiJ_G0018656	-	66	99.194	ENSLAFG00000003083	ALYREF	66	99.194	Loxodonta_africana
MGP_PahariEiJ_G0018656	-	99	94.180	ENSMFAG00000001394	ALYREF	71	94.180	Macaca_fascicularis
MGP_PahariEiJ_G0018656	-	99	97.354	ENSMMUG00000012884	ALYREF	95	92.737	Macaca_mulatta
MGP_PahariEiJ_G0018656	-	99	97.354	ENSMNEG00000043666	ALYREF	91	92.737	Macaca_nemestrina
MGP_PahariEiJ_G0018656	-	65	93.651	ENSMLEG00000043353	ALYREF	61	93.651	Mandrillus_leucophaeus
MGP_PahariEiJ_G0018656	-	99	73.438	ENSMAUG00000020552	-	72	73.936	Mesocricetus_auratus
MGP_PahariEiJ_G0018656	-	99	96.825	ENSMICG00000017403	ALYREF	95	92.179	Microcebus_murinus
MGP_PahariEiJ_G0018656	-	99	81.383	ENSMOCG00000016792	-	74	80.628	Microtus_ochrogaster
MGP_PahariEiJ_G0018656	-	99	93.158	ENSMODG00000003030	ALYREF	62	93.684	Monodelphis_domestica
MGP_PahariEiJ_G0018656	-	99	71.287	ENSMALG00000019408	ALYREF	73	74.257	Monopterus_albus
MGP_PahariEiJ_G0018656	-	99	78.191	MGP_CAROLIEiJ_G0014874	Alyref2	71	75.000	Mus_caroli
MGP_PahariEiJ_G0018656	-	99	100.000	MGP_CAROLIEiJ_G0017529	Alyref	74	100.000	Mus_caroli
MGP_PahariEiJ_G0018656	-	99	67.380	ENSMUSG00000112856	Gm4305	57	66.310	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.380	ENSMUSG00000091101	Gm4302	56	66.310	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000097550	Gm21304	64	64.894	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	65.775	ENSMUSG00000094314	Gm4301	57	64.706	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.380	ENSMUSG00000112931	Gm4303	57	66.310	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000097878	Gm8764	95	61.491	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.380	ENSMUSG00000096744	Gm4307	57	66.310	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000090854	Gm4340	63	64.894	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	100.000	ENSMUSG00000025134	Alyref	74	100.000	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000094144	Gm21312	64	64.894	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	78.191	ENSMUSG00000060244	Alyref2	72	77.128	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	62.234	ENSMUSG00000117091	AC153137.1	69	61.170	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	65.775	ENSMUSG00000096640	Gm4312	57	64.706	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000095022	Gm20765	64	64.894	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000091779	Gm21293	64	64.894	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	67.553	ENSMUSG00000097427	Gm6763	95	61.491	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	62.766	ENSMUSG00000086727	4931428L18Rik	69	61.702	Mus_musculus
MGP_PahariEiJ_G0018656	-	99	78.191	MGP_SPRETEiJ_G0015679	Alyref2	72	75.000	Mus_spretus
MGP_PahariEiJ_G0018656	-	60	78.947	MGP_SPRETEiJ_G0016590	-	50	78.947	Mus_spretus
MGP_PahariEiJ_G0018656	-	99	100.000	MGP_SPRETEiJ_G0018373	Alyref	74	100.000	Mus_spretus
MGP_PahariEiJ_G0018656	-	99	67.196	ENSMLUG00000002626	-	70	68.280	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	69.149	ENSMLUG00000027516	-	57	69.149	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	64.171	ENSMLUG00000025677	-	54	64.516	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	57.447	ENSMLUG00000015043	-	60	63.758	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	60.638	ENSMLUG00000022869	-	51	67.114	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	83	60.256	ENSMLUG00000028343	-	55	71.304	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	58.511	ENSMLUG00000024471	-	50	65.101	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	62.032	ENSMLUG00000030407	-	54	62.366	Myotis_lucifugus
MGP_PahariEiJ_G0018656	-	99	97.884	ENSNLEG00000010313	ALYREF	95	93.296	Nomascus_leucogenys
MGP_PahariEiJ_G0018656	-	86	67.879	ENSMEUG00000002210	ALYREF	72	67.879	Notamacropus_eugenii
MGP_PahariEiJ_G0018656	-	99	96.354	ENSODEG00000008359	ALYREF	74	96.354	Octodon_degus
MGP_PahariEiJ_G0018656	-	99	71.569	ENSORLG00000012331	ALYREF	74	74.752	Oryzias_latipes
MGP_PahariEiJ_G0018656	-	99	97.884	ENSPPRG00000010829	ALYREF	72	97.884	Panthera_pardus
MGP_PahariEiJ_G0018656	-	61	99.130	ENSPTIG00000006399	ALYREF	64	100.000	Panthera_tigris_altaica
MGP_PahariEiJ_G0018656	-	99	97.884	ENSPTRG00000009774	ALYREF	95	93.296	Pan_troglodytes
MGP_PahariEiJ_G0018656	-	99	97.354	ENSPANG00000019265	ALYREF	95	92.737	Papio_anubis
MGP_PahariEiJ_G0018656	-	99	97.354	ENSPPYG00000008749	ALYREF	72	97.354	Pongo_abelii
MGP_PahariEiJ_G0018656	-	99	96.825	ENSPCOG00000020874	ALYREF	95	92.179	Propithecus_coquereli
MGP_PahariEiJ_G0018656	-	99	76.720	ENSPVAG00000017866	ALYREF	74	76.720	Pteropus_vampyrus
MGP_PahariEiJ_G0018656	-	88	99.405	ENSRNOG00000036687	Alyref	89	99.405	Rattus_norvegicus
MGP_PahariEiJ_G0018656	-	88	87.425	ENSRROG00000045364	ALYREF	70	92.800	Rhinopithecus_roxellana
MGP_PahariEiJ_G0018656	-	67	92.126	ENSSHAG00000010459	ALYREF	63	95.041	Sarcophilus_harrisii
MGP_PahariEiJ_G0018656	-	98	58.031	ENSSDUG00000003992	-	69	56.923	Seriola_dumerili
MGP_PahariEiJ_G0018656	-	98	57.513	ENSSLDG00000005386	-	70	56.923	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0018656	-	99	81.865	ENSSPUG00000004600	ALYREF	74	80.311	Sphenodon_punctatus
MGP_PahariEiJ_G0018656	-	99	74.020	ENSSPAG00000011178	ALYREF	71	75.490	Stegastes_partitus
MGP_PahariEiJ_G0018656	-	99	97.872	ENSSSCG00000032655	ALYREF	73	97.872	Sus_scrofa
MGP_PahariEiJ_G0018656	-	99	73.134	ENSTRUG00000008828	ALYREF	74	74.627	Takifugu_rubripes
MGP_PahariEiJ_G0018656	-	60	99.123	ENSTBEG00000005834	ALYREF	64	99.123	Tupaia_belangeri
MGP_PahariEiJ_G0018656	-	99	95.767	ENSTTRG00000012275	ALYREF	73	95.767	Tursiops_truncatus
MGP_PahariEiJ_G0018656	-	99	76.064	ENSXETG00000005391	alyref	74	75.879	Xenopus_tropicalis