EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019004 (Gene tree)
Gene ID: 110333308
Gene Symbol: Srfbp1
Alias: 2810036K01Rik
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 24552 bases
Position: chr15:46696239-46720790
Accession: 110333308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0039315	BUD22	PF09073.10	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0039315	-	1451	-	MGP_PahariEiJ_P0039315	442 (aa)	XP_021070551	UPI000A3103D3

Gene Model

Click here to download MGP_PahariEiJ_G0019004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019004	Srfbp1	98	67.051	ENSG00000151304	SRFBP1	100	67.130	Homo_sapiens
MGP_PahariEiJ_G0019004	Srfbp1	97	64.103	ENSAMEG00000018050	SRFBP1	99	64.103	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019004	Srfbp1	97	39.910	ENSACIG00000019127	-	99	41.084	Amphilophus_citrinellus
MGP_PahariEiJ_G0019004	Srfbp1	75	62.500	ENSAOCG00000002182	-	64	59.836	Amphiprion_ocellaris
MGP_PahariEiJ_G0019004	Srfbp1	99	37.352	ENSATEG00000007289	-	86	35.098	Anabas_testudineus
MGP_PahariEiJ_G0019004	Srfbp1	98	44.124	ENSACAG00000003779	SRFBP1	100	43.363	Anolis_carolinensis
MGP_PahariEiJ_G0019004	Srfbp1	98	64.368	ENSANAG00000022485	SRFBP1	100	64.203	Aotus_nancymaae
MGP_PahariEiJ_G0019004	Srfbp1	97	37.725	ENSACLG00000013909	-	90	38.142	Astatotilapia_calliptera
MGP_PahariEiJ_G0019004	Srfbp1	98	64.352	ENSBTAG00000014320	SRFBP1	100	64.352	Bos_taurus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.744	ENSCJAG00000017177	SRFBP1	100	66.744	Callithrix_jacchus
MGP_PahariEiJ_G0019004	Srfbp1	98	65.899	ENSCAFG00000000512	SRFBP1	100	65.589	Canis_familiaris
MGP_PahariEiJ_G0019004	Srfbp1	98	65.899	ENSCAFG00020009389	SRFBP1	100	65.589	Canis_lupus_dingo
MGP_PahariEiJ_G0019004	Srfbp1	97	63.023	ENSTSYG00000008630	-	99	63.403	Carlito_syrichta
MGP_PahariEiJ_G0019004	Srfbp1	95	45.714	ENSTSYG00000006869	-	99	45.714	Carlito_syrichta
MGP_PahariEiJ_G0019004	Srfbp1	98	64.138	ENSCPOG00000004695	SRFBP1	100	62.022	Cavia_porcellus
MGP_PahariEiJ_G0019004	Srfbp1	98	65.589	ENSCCAG00000032237	-	100	65.589	Cebus_capucinus
MGP_PahariEiJ_G0019004	Srfbp1	98	67.361	ENSCATG00000040904	SRFBP1	100	65.688	Cercocebus_atys
MGP_PahariEiJ_G0019004	Srfbp1	98	64.516	ENSCLAG00000003630	SRFBP1	100	64.516	Chinchilla_lanigera
MGP_PahariEiJ_G0019004	Srfbp1	98	63.741	ENSCSAG00000014636	SRFBP1	100	64.786	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.898	ENSCANG00000041298	SRFBP1	100	65.237	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019004	Srfbp1	100	77.602	ENSCGRG00001000718	Srfbp1	100	77.602	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019004	Srfbp1	94	76.259	ENSCGRG00000010837	Srfbp1	100	76.259	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019004	Srfbp1	73	71.795	ENSCSEG00000011789	-	99	41.364	Cynoglossus_semilaevis
MGP_PahariEiJ_G0019004	Srfbp1	96	39.091	ENSCVAG00000013010	-	97	38.864	Cyprinodon_variegatus
MGP_PahariEiJ_G0019004	Srfbp1	78	59.302	ENSDNOG00000017733	SRFBP1	100	58.601	Dasypus_novemcinctus
MGP_PahariEiJ_G0019004	Srfbp1	77	52.907	ENSETEG00000012408	SRFBP1	100	52.907	Echinops_telfairi
MGP_PahariEiJ_G0019004	Srfbp1	76	46.154	ENSEBUG00000007806	SRFBP1	58	46.154	Eptatretus_burgeri
MGP_PahariEiJ_G0019004	Srfbp1	98	67.206	ENSEASG00005012421	SRFBP1	100	66.898	Equus_asinus_asinus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.513	ENSECAG00000015330	SRFBP1	100	66.204	Equus_caballus
MGP_PahariEiJ_G0019004	Srfbp1	98	57.143	ENSEEUG00000011514	SRFBP1	100	57.143	Erinaceus_europaeus
MGP_PahariEiJ_G0019004	Srfbp1	99	35.146	ENSELUG00000018381	-	99	36.192	Esox_lucius
MGP_PahariEiJ_G0019004	Srfbp1	98	66.975	ENSFCAG00000035118	SRFBP1	100	66.667	Felis_catus
MGP_PahariEiJ_G0019004	Srfbp1	94	42.130	ENSFALG00000007595	SRFBP1	100	42.361	Ficedula_albicollis
MGP_PahariEiJ_G0019004	Srfbp1	98	62.156	ENSFDAG00000005102	SRFBP1	100	62.156	Fukomys_damarensis
MGP_PahariEiJ_G0019004	Srfbp1	99	35.714	ENSFHEG00000000477	-	87	36.812	Fundulus_heteroclitus
MGP_PahariEiJ_G0019004	Srfbp1	68	58.621	ENSGMOG00000012729	-	85	37.097	Gadus_morhua
MGP_PahariEiJ_G0019004	Srfbp1	97	41.649	ENSGALG00000005316	SRFBP1	99	41.432	Gallus_gallus
MGP_PahariEiJ_G0019004	Srfbp1	74	69.048	ENSGAFG00000018777	-	87	37.320	Gambusia_affinis
MGP_PahariEiJ_G0019004	Srfbp1	99	40.858	ENSGACG00000009055	-	85	39.819	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019004	Srfbp1	94	42.506	ENSGAGG00000024915	SRFBP1	99	43.400	Gopherus_agassizii
MGP_PahariEiJ_G0019004	Srfbp1	98	66.820	ENSGGOG00000007725	SRFBP1	100	65.011	Gorilla_gorilla
MGP_PahariEiJ_G0019004	Srfbp1	99	63.063	ENSSTOG00000029184	SRFBP1	99	63.514	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019004	Srfbp1	94	62.857	ENSJJAG00000013229	Srfbp1	100	62.381	Jaculus_jaculus
MGP_PahariEiJ_G0019004	Srfbp1	77	36.685	ENSLACG00000004456	SRFBP1	100	35.967	Latimeria_chalumnae
MGP_PahariEiJ_G0019004	Srfbp1	98	42.457	ENSLOCG00000008772	SRFBP1	100	42.366	Lepisosteus_oculatus
MGP_PahariEiJ_G0019004	Srfbp1	99	64.189	ENSLAFG00000015303	SRFBP1	100	63.288	Loxodonta_africana
MGP_PahariEiJ_G0019004	Srfbp1	98	67.130	ENSMFAG00000031263	SRFBP1	100	65.463	Macaca_fascicularis
MGP_PahariEiJ_G0019004	Srfbp1	98	67.361	ENSMMUG00000021009	SRFBP1	100	65.688	Macaca_mulatta
MGP_PahariEiJ_G0019004	Srfbp1	98	67.130	ENSMNEG00000040870	SRFBP1	100	65.463	Macaca_nemestrina
MGP_PahariEiJ_G0019004	Srfbp1	77	67.442	ENSMAMG00000004632	-	88	37.328	Mastacembelus_armatus
MGP_PahariEiJ_G0019004	Srfbp1	97	37.652	ENSMZEG00005000432	-	90	38.677	Maylandia_zebra
MGP_PahariEiJ_G0019004	Srfbp1	100	75.339	ENSMAUG00000009431	Srfbp1	100	75.339	Mesocricetus_auratus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.972	ENSMICG00000042923	SRFBP1	100	66.972	Microcebus_murinus
MGP_PahariEiJ_G0019004	Srfbp1	100	76.697	ENSMOCG00000006206	Srfbp1	100	76.697	Microtus_ochrogaster
MGP_PahariEiJ_G0019004	Srfbp1	98	53.153	ENSMODG00000013487	-	99	53.378	Monodelphis_domestica
MGP_PahariEiJ_G0019004	Srfbp1	100	92.308	MGP_CAROLIEiJ_G0022271	Srfbp1	100	92.308	Mus_caroli
MGP_PahariEiJ_G0019004	Srfbp1	100	90.724	ENSMUSG00000024528	Srfbp1	100	90.724	Mus_musculus
MGP_PahariEiJ_G0019004	Srfbp1	100	91.176	MGP_SPRETEiJ_G0023184	Srfbp1	100	91.176	Mus_spretus
MGP_PahariEiJ_G0019004	Srfbp1	94	65.789	ENSMPUG00000013031	SRFBP1	100	66.427	Mustela_putorius_furo
MGP_PahariEiJ_G0019004	Srfbp1	97	63.488	ENSMLUG00000009984	SRFBP1	100	63.488	Myotis_lucifugus
MGP_PahariEiJ_G0019004	Srfbp1	99	64.612	ENSNGAG00000013229	Srfbp1	99	64.612	Nannospalax_galili
MGP_PahariEiJ_G0019004	Srfbp1	97	40.716	ENSNBRG00000001146	-	98	40.411	Neolamprologus_brichardi
MGP_PahariEiJ_G0019004	Srfbp1	98	66.898	ENSNLEG00000011949	SRFBP1	100	65.385	Nomascus_leucogenys
MGP_PahariEiJ_G0019004	Srfbp1	51	59.322	ENSMEUG00000009383	-	54	59.322	Notamacropus_eugenii
MGP_PahariEiJ_G0019004	Srfbp1	64	63.889	ENSOPRG00000003881	-	82	63.889	Ochotona_princeps
MGP_PahariEiJ_G0019004	Srfbp1	94	61.098	ENSODEG00000007258	SRFBP1	100	61.098	Octodon_degus
MGP_PahariEiJ_G0019004	Srfbp1	83	48.148	ENSOANG00000010042	-	98	48.148	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0019004	Srfbp1	99	66.366	ENSOCUG00000009556	SRFBP1	99	66.366	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019004	Srfbp1	97	36.714	ENSORLG00000014234	-	88	36.511	Oryzias_latipes
MGP_PahariEiJ_G0019004	Srfbp1	98	64.352	ENSOGAG00000032423	SRFBP1	100	63.805	Otolemur_garnettii
MGP_PahariEiJ_G0019004	Srfbp1	98	66.590	ENSPPAG00000035848	SRFBP1	100	64.786	Pan_paniscus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.975	ENSPPRG00000001695	SRFBP1	100	66.282	Panthera_pardus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.744	ENSPTIG00000012305	SRFBP1	100	66.051	Panthera_tigris_altaica
MGP_PahariEiJ_G0019004	Srfbp1	98	66.820	ENSPTRG00000017172	SRFBP1	100	65.011	Pan_troglodytes
MGP_PahariEiJ_G0019004	Srfbp1	98	66.667	ENSPANG00000003799	SRFBP1	100	65.611	Papio_anubis
MGP_PahariEiJ_G0019004	Srfbp1	97	35.928	ENSPKIG00000024291	-	99	35.729	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019004	Srfbp1	98	44.667	ENSPSIG00000010650	SRFBP1	99	44.444	Pelodiscus_sinensis
MGP_PahariEiJ_G0019004	Srfbp1	98	53.864	ENSPCIG00000028532	SRFBP1	94	53.515	Phascolarctos_cinereus
MGP_PahariEiJ_G0019004	Srfbp1	97	41.480	ENSPFOG00000005272	-	87	40.848	Poecilia_formosa
MGP_PahariEiJ_G0019004	Srfbp1	96	37.474	ENSPLAG00000018282	-	87	37.450	Poecilia_latipinna
MGP_PahariEiJ_G0019004	Srfbp1	96	37.681	ENSPMEG00000020184	-	88	38.604	Poecilia_mexicana
MGP_PahariEiJ_G0019004	Srfbp1	96	42.627	ENSPREG00000017248	-	98	42.922	Poecilia_reticulata
MGP_PahariEiJ_G0019004	Srfbp1	98	67.051	ENSPPYG00000015714	SRFBP1	100	66.898	Pongo_abelii
MGP_PahariEiJ_G0019004	Srfbp1	98	66.513	ENSPCOG00000027331	SRFBP1	100	66.513	Propithecus_coquereli
MGP_PahariEiJ_G0019004	Srfbp1	56	82.468	ENSPVAG00000017512	-	58	82.468	Pteropus_vampyrus
MGP_PahariEiJ_G0019004	Srfbp1	97	40.690	ENSPNYG00000010355	-	99	41.570	Pundamilia_nyererei
MGP_PahariEiJ_G0019004	Srfbp1	69	53.731	ENSPNAG00000029666	srfbp1	96	46.951	Pygocentrus_nattereri
MGP_PahariEiJ_G0019004	Srfbp1	100	82.619	ENSRNOG00000014808	Srfbp1	100	82.619	Rattus_norvegicus
MGP_PahariEiJ_G0019004	Srfbp1	95	62.708	ENSRBIG00000031064	SRFBP1	99	62.470	Rhinopithecus_bieti
MGP_PahariEiJ_G0019004	Srfbp1	98	67.361	ENSRROG00000026932	SRFBP1	100	67.130	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019004	Srfbp1	98	66.204	ENSSBOG00000015464	-	99	66.204	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019004	Srfbp1	98	54.545	ENSSHAG00000016003	SRFBP1	99	54.318	Sarcophilus_harrisii
MGP_PahariEiJ_G0019004	Srfbp1	97	37.996	ENSSFOG00015001274	srfbp1	99	39.040	Scleropages_formosus
MGP_PahariEiJ_G0019004	Srfbp1	97	37.044	ENSSMAG00000020630	-	59	61.600	Scophthalmus_maximus
MGP_PahariEiJ_G0019004	Srfbp1	99	35.417	ENSSDUG00000001828	-	61	60.150	Seriola_dumerili
MGP_PahariEiJ_G0019004	Srfbp1	98	63.364	ENSSARG00000010669	SRFBP1	100	64.747	Sorex_araneus
MGP_PahariEiJ_G0019004	Srfbp1	95	43.119	ENSSPUG00000009204	SRFBP1	99	43.119	Sphenodon_punctatus
MGP_PahariEiJ_G0019004	Srfbp1	83	43.333	ENSSPAG00000010728	-	84	36.295	Stegastes_partitus
MGP_PahariEiJ_G0019004	Srfbp1	98	66.051	ENSSSCG00000022656	SRFBP1	100	65.741	Sus_scrofa
MGP_PahariEiJ_G0019004	Srfbp1	99	41.111	ENSTNIG00000009267	-	99	42.129	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019004	Srfbp1	73	70.755	ENSTTRG00000007726	SRFBP1	77	70.755	Tursiops_truncatus
MGP_PahariEiJ_G0019004	Srfbp1	94	66.746	ENSUAMG00000016707	SRFBP1	100	66.906	Ursus_americanus
MGP_PahariEiJ_G0019004	Srfbp1	95	65.952	ENSUMAG00000018340	SRFBP1	100	61.792	Ursus_maritimus
MGP_PahariEiJ_G0019004	Srfbp1	98	65.358	ENSVPAG00000005714	SRFBP1	100	65.741	Vicugna_pacos
MGP_PahariEiJ_G0019004	Srfbp1	98	65.438	ENSVVUG00000019178	SRFBP1	100	64.896	Vulpes_vulpes
MGP_PahariEiJ_G0019004	Srfbp1	97	43.736	ENSXETG00000004681	srfbp1	100	41.794	Xenopus_tropicalis
MGP_PahariEiJ_G0019004	Srfbp1	97	38.259	ENSXCOG00000003410	-	99	38.105	Xiphophorus_couchianus
MGP_PahariEiJ_G0019004	Srfbp1	96	38.763	ENSXMAG00000026251	-	86	38.809	Xiphophorus_maculatus