EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019128 (Gene tree)
Gene ID: 110333062
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 14431 bases
Position: chr15:67518993-67533423
Accession: 110333062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0039690	MBD	PF01429.19	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0039690	-	2685	XM_021214460	MGP_PahariEiJ_P0039690	580 (aa)	XP_021070119	UPI000A304334
MGP_PahariEiJ_T0039691	-	2062	-	MGP_PahariEiJ_P0039691	625 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0019128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019128	Mbd1	100	68.362	ENSG00000141644	MBD1	99	77.647	Homo_sapiens
MGP_PahariEiJ_G0019128	Mbd1	100	65.091	ENSAMEG00000000238	MBD1	96	64.787	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019128	Mbd1	64	40.845	ENSACAG00000006091	-	100	39.907	Anolis_carolinensis
MGP_PahariEiJ_G0019128	Mbd1	99	67.145	ENSANAG00000036253	MBD1	100	64.832	Aotus_nancymaae
MGP_PahariEiJ_G0019128	Mbd1	100	65.714	ENSBTAG00000003801	MBD1	100	65.665	Bos_taurus
MGP_PahariEiJ_G0019128	Mbd1	98	67.695	ENSCJAG00000004959	MBD1	100	63.885	Callithrix_jacchus
MGP_PahariEiJ_G0019128	Mbd1	100	64.885	ENSCAFG00000018928	MBD1	96	64.580	Canis_familiaris
MGP_PahariEiJ_G0019128	Mbd1	99	64.760	ENSCAFG00020024272	MBD1	97	64.451	Canis_lupus_dingo
MGP_PahariEiJ_G0019128	Mbd1	100	65.714	ENSCHIG00000021134	MBD1	100	65.823	Capra_hircus
MGP_PahariEiJ_G0019128	Mbd1	98	67.532	ENSTSYG00000000509	MBD1	100	64.832	Carlito_syrichta
MGP_PahariEiJ_G0019128	Mbd1	100	60.206	ENSCAPG00000015782	MBD1	100	58.020	Cavia_aperea
MGP_PahariEiJ_G0019128	Mbd1	100	60.836	ENSCPOG00000001671	MBD1	100	59.443	Cavia_porcellus
MGP_PahariEiJ_G0019128	Mbd1	100	66.614	ENSCCAG00000034600	MBD1	99	60.575	Cebus_capucinus
MGP_PahariEiJ_G0019128	Mbd1	100	68.680	ENSCATG00000029959	MBD1	100	68.362	Cercocebus_atys
MGP_PahariEiJ_G0019128	Mbd1	100	66.055	ENSCLAG00000007457	MBD1	89	65.749	Chinchilla_lanigera
MGP_PahariEiJ_G0019128	Mbd1	100	68.203	ENSCSAG00000018070	MBD1	100	68.362	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019128	Mbd1	100	68.362	ENSCANG00000033425	MBD1	84	86.842	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019128	Mbd1	100	75.119	ENSCGRG00001014843	Mbd1	100	74.802	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019128	Mbd1	100	68.439	ENSCGRG00000014135	Mbd1	100	68.096	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019128	Mbd1	90	71.886	ENSDNOG00000015998	MBD1	100	60.213	Dasypus_novemcinctus
MGP_PahariEiJ_G0019128	Mbd1	100	63.761	ENSDORG00000013917	Mbd1	100	63.419	Dipodomys_ordii
MGP_PahariEiJ_G0019128	Mbd1	100	65.764	ENSEASG00005003857	MBD1	100	65.446	Equus_asinus_asinus
MGP_PahariEiJ_G0019128	Mbd1	100	65.927	ENSECAG00000011497	MBD1	80	66.719	Equus_caballus
MGP_PahariEiJ_G0019128	Mbd1	98	68.123	ENSFCAG00000015730	MBD1	100	64.787	Felis_catus
MGP_PahariEiJ_G0019128	Mbd1	96	63.732	ENSFDAG00000011085	MBD1	98	62.329	Fukomys_damarensis
MGP_PahariEiJ_G0019128	Mbd1	100	68.362	ENSGGOG00000016966	MBD1	100	68.521	Gorilla_gorilla
MGP_PahariEiJ_G0019128	Mbd1	100	68.680	ENSHGLG00000008740	MBD1	100	68.362	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019128	Mbd1	96	62.434	ENSHGLG00100005198	MBD1	100	63.478	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019128	Mbd1	100	67.453	ENSSTOG00000007780	MBD1	100	67.762	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019128	Mbd1	100	67.637	ENSJJAG00000022859	Mbd1	100	67.466	Jaculus_jaculus
MGP_PahariEiJ_G0019128	Mbd1	72	37.086	ENSLACG00000002414	-	64	36.645	Latimeria_chalumnae
MGP_PahariEiJ_G0019128	Mbd1	99	59.003	ENSLAFG00000031328	MBD1	97	58.842	Loxodonta_africana
MGP_PahariEiJ_G0019128	Mbd1	100	68.680	ENSMFAG00000026335	MBD1	100	68.362	Macaca_fascicularis
MGP_PahariEiJ_G0019128	Mbd1	100	66.055	ENSMMUG00000009050	MBD1	100	65.749	Macaca_mulatta
MGP_PahariEiJ_G0019128	Mbd1	100	68.680	ENSMNEG00000038822	MBD1	100	68.362	Macaca_nemestrina
MGP_PahariEiJ_G0019128	Mbd1	100	68.680	ENSMLEG00000043121	MBD1	100	68.362	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019128	Mbd1	100	69.097	ENSMICG00000006414	MBD1	100	68.780	Microcebus_murinus
MGP_PahariEiJ_G0019128	Mbd1	100	85.956	ENSMUSG00000024561	Mbd1	100	85.956	Mus_musculus
MGP_PahariEiJ_G0019128	Mbd1	98	88.312	MGP_SPRETEiJ_G0023304	Mbd1	99	88.312	Mus_spretus
MGP_PahariEiJ_G0019128	Mbd1	100	63.872	ENSMPUG00000008843	MBD1	96	63.567	Mustela_putorius_furo
MGP_PahariEiJ_G0019128	Mbd1	100	62.997	ENSMLUG00000008286	MBD1	96	63.303	Myotis_lucifugus
MGP_PahariEiJ_G0019128	Mbd1	100	68.729	ENSNGAG00000011412	Mbd1	100	67.114	Nannospalax_galili
MGP_PahariEiJ_G0019128	Mbd1	96	59.286	ENSNLEG00000032711	-	89	59.464	Nomascus_leucogenys
MGP_PahariEiJ_G0019128	Mbd1	100	67.727	ENSNLEG00000011661	-	100	67.886	Nomascus_leucogenys
MGP_PahariEiJ_G0019128	Mbd1	100	60.095	ENSOPRG00000007647	MBD1	100	59.777	Ochotona_princeps
MGP_PahariEiJ_G0019128	Mbd1	100	66.440	ENSODEG00000018451	MBD1	100	66.099	Octodon_degus
MGP_PahariEiJ_G0019128	Mbd1	59	37.195	ENSONIG00000020289	mbd1b	51	30.310	Oreochromis_niloticus
MGP_PahariEiJ_G0019128	Mbd1	85	41.239	ENSOANG00000014593	-	99	42.315	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0019128	Mbd1	100	62.595	ENSOCUG00000006554	MBD1	100	63.053	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019128	Mbd1	100	63.705	ENSOGAG00000003784	MBD1	96	63.855	Otolemur_garnettii
MGP_PahariEiJ_G0019128	Mbd1	100	63.110	ENSOARG00000004218	MBD1	95	63.110	Ovis_aries
MGP_PahariEiJ_G0019128	Mbd1	100	68.521	ENSPPAG00000038886	MBD1	100	68.680	Pan_paniscus
MGP_PahariEiJ_G0019128	Mbd1	100	67.829	ENSPPRG00000021387	MBD1	100	67.353	Panthera_pardus
MGP_PahariEiJ_G0019128	Mbd1	100	67.987	ENSPTIG00000021231	MBD1	100	67.512	Panthera_tigris_altaica
MGP_PahariEiJ_G0019128	Mbd1	100	68.521	ENSPTRG00000010021	MBD1	100	68.680	Pan_troglodytes
MGP_PahariEiJ_G0019128	Mbd1	98	68.994	ENSPANG00000010867	MBD1	100	65.749	Papio_anubis
MGP_PahariEiJ_G0019128	Mbd1	100	73.459	ENSPEMG00000022630	Mbd1	100	73.242	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019128	Mbd1	96	43.840	ENSPCIG00000027937	-	79	43.200	Phascolarctos_cinereus
MGP_PahariEiJ_G0019128	Mbd1	100	67.886	ENSPPYG00000009158	MBD1	91	68.045	Pongo_abelii
MGP_PahariEiJ_G0019128	Mbd1	99	60.828	ENSPCAG00000001648	MBD1	99	60.350	Procavia_capensis
MGP_PahariEiJ_G0019128	Mbd1	100	69.206	ENSPCOG00000012450	MBD1	100	71.014	Propithecus_coquereli
MGP_PahariEiJ_G0019128	Mbd1	100	67.857	ENSRNOG00000024104	Mbd1	100	71.821	Rattus_norvegicus
MGP_PahariEiJ_G0019128	Mbd1	100	61.208	ENSRBIG00000041294	MBD1	100	61.367	Rhinopithecus_bieti
MGP_PahariEiJ_G0019128	Mbd1	100	67.727	ENSRROG00000032517	MBD1	100	67.886	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019128	Mbd1	98	67.370	ENSSBOG00000027169	MBD1	99	61.525	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019128	Mbd1	77	42.800	ENSSHAG00000003661	-	100	42.715	Sarcophilus_harrisii
MGP_PahariEiJ_G0019128	Mbd1	100	64.968	ENSSSCG00000004516	MBD1	100	64.809	Sus_scrofa
MGP_PahariEiJ_G0019128	Mbd1	70	61.044	ENSTBEG00000012651	-	69	60.241	Tupaia_belangeri
MGP_PahariEiJ_G0019128	Mbd1	100	64.342	ENSTTRG00000015523	MBD1	100	64.501	Tursiops_truncatus
MGP_PahariEiJ_G0019128	Mbd1	100	64.127	ENSUAMG00000004752	MBD1	100	64.818	Ursus_americanus
MGP_PahariEiJ_G0019128	Mbd1	100	67.670	ENSUMAG00000002947	MBD1	100	67.195	Ursus_maritimus