EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019286 (Gene tree)
Gene ID: 110333580
Gene Symbol: Arid4b
Alias: 6330417L24Rik|6720480E17Rik|BRCAA1|RBBP1L1|Rbp1l1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 126868 bases
Position: chr16:17883474-18010341
Accession: 110333580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0040311	Tudor-knot	PF11717.8	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0040308	-	568	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040309	-	1802	-	MGP_PahariEiJ_P0040309	540 (aa)	-	-
MGP_PahariEiJ_T0040315	-	4166	-	MGP_PahariEiJ_P0040315	615 (aa)	-	-
MGP_PahariEiJ_T0040314	-	681	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040317	-	745	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040316	-	4563	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040311	-	5848	XM_021215184	MGP_PahariEiJ_P0040311	1312 (aa)	XP_021070843	UPI000A308EE1
MGP_PahariEiJ_T0040310	-	5769	-	MGP_PahariEiJ_P0040310	1225 (aa)	-	UPI000A30D2C7
MGP_PahariEiJ_T0040313	-	2972	-	MGP_PahariEiJ_P0040313	473 (aa)	-	-
MGP_PahariEiJ_T0040312	-	5830	XM_021215185	MGP_PahariEiJ_P0040312	1225 (aa)	XP_021070844	UPI000A30D2C7

Gene Model

Click here to download MGP_PahariEiJ_G0019286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019286	Arid4b	100	89.278	ENSG00000054267	ARID4B	99	94.191	Homo_sapiens
MGP_PahariEiJ_G0019286	Arid4b	99	89.269	ENSAMEG00000008801	ARID4B	100	88.813	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019286	Arid4b	65	73.301	ENSACIG00000006313	tomm20a	71	72.573	Amphilophus_citrinellus
MGP_PahariEiJ_G0019286	Arid4b	99	52.632	ENSATEG00000014930	tomm20a	100	51.774	Anabas_testudineus
MGP_PahariEiJ_G0019286	Arid4b	100	75.735	ENSAPLG00000004422	ARID4B	100	75.961	Anas_platyrhynchos
MGP_PahariEiJ_G0019286	Arid4b	99	71.418	ENSACAG00000001289	ARID4B	100	71.548	Anolis_carolinensis
MGP_PahariEiJ_G0019286	Arid4b	100	89.810	ENSANAG00000038088	ARID4B	100	89.658	Aotus_nancymaae
MGP_PahariEiJ_G0019286	Arid4b	88	64.390	ENSACLG00000023521	tomm20a	98	64.390	Astatotilapia_calliptera
MGP_PahariEiJ_G0019286	Arid4b	86	65.366	ENSAMXG00000003657	tomm20a	86	67.470	Astyanax_mexicanus
MGP_PahariEiJ_G0019286	Arid4b	100	88.213	ENSBTAG00000000222	ARID4B	100	87.757	Bos_taurus
MGP_PahariEiJ_G0019286	Arid4b	100	88.737	ENSCJAG00000018055	ARID4B	100	88.508	Callithrix_jacchus
MGP_PahariEiJ_G0019286	Arid4b	100	89.430	ENSCAFG00000011439	ARID4B	100	88.973	Canis_familiaris
MGP_PahariEiJ_G0019286	Arid4b	99	89.059	ENSCAFG00020027130	ARID4B	99	88.600	Canis_lupus_dingo
MGP_PahariEiJ_G0019286	Arid4b	99	85.015	ENSCHIG00000020742	ARID4B	100	84.939	Capra_hircus
MGP_PahariEiJ_G0019286	Arid4b	100	89.962	ENSTSYG00000010028	ARID4B	100	89.886	Carlito_syrichta
MGP_PahariEiJ_G0019286	Arid4b	99	87.357	ENSCPOG00000034766	ARID4B	100	87.586	Cavia_porcellus
MGP_PahariEiJ_G0019286	Arid4b	100	89.658	ENSCCAG00000021520	ARID4B	100	89.506	Cebus_capucinus
MGP_PahariEiJ_G0019286	Arid4b	100	89.886	ENSCATG00000042166	ARID4B	100	89.734	Cercocebus_atys
MGP_PahariEiJ_G0019286	Arid4b	100	89.125	ENSCLAG00000003255	ARID4B	100	88.821	Chinchilla_lanigera
MGP_PahariEiJ_G0019286	Arid4b	100	90.038	ENSCSAG00000010069	ARID4B	100	89.886	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019286	Arid4b	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
MGP_PahariEiJ_G0019286	Arid4b	100	75.076	ENSCPBG00000004501	ARID4B	100	75.755	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019286	Arid4b	100	86.160	ENSCANG00000027498	ARID4B	100	80.934	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019286	Arid4b	100	94.373	ENSCGRG00001014397	Arid4b	100	94.601	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019286	Arid4b	99	94.364	ENSCGRG00000004910	Arid4b	100	94.593	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019286	Arid4b	56	87.887	ENSDNOG00000005711	ARID4B	100	87.887	Dasypus_novemcinctus
MGP_PahariEiJ_G0019286	Arid4b	99	88.584	ENSDORG00000006422	Arid4b	100	88.584	Dipodomys_ordii
MGP_PahariEiJ_G0019286	Arid4b	89	87.316	ENSETEG00000005596	ARID4B	92	86.747	Echinops_telfairi
MGP_PahariEiJ_G0019286	Arid4b	99	87.053	ENSEASG00005000677	ARID4B	99	87.814	Equus_asinus_asinus
MGP_PahariEiJ_G0019286	Arid4b	99	89.337	ENSECAG00000017836	ARID4B	99	88.728	Equus_caballus
MGP_PahariEiJ_G0019286	Arid4b	83	100.000	ENSEEUG00000005378	ARID4B	86	100.000	Erinaceus_europaeus
MGP_PahariEiJ_G0019286	Arid4b	100	88.289	ENSFCAG00000030096	ARID4B	100	88.061	Felis_catus
MGP_PahariEiJ_G0019286	Arid4b	100	76.888	ENSFALG00000013548	ARID4B	98	76.586	Ficedula_albicollis
MGP_PahariEiJ_G0019286	Arid4b	99	88.500	ENSFDAG00000014194	ARID4B	100	87.662	Fukomys_damarensis
MGP_PahariEiJ_G0019286	Arid4b	54	60.166	ENSFHEG00000003798	tomm20a	53	60.300	Fundulus_heteroclitus
MGP_PahariEiJ_G0019286	Arid4b	90	52.245	ENSGMOG00000018747	tomm20a	92	51.543	Gadus_morhua
MGP_PahariEiJ_G0019286	Arid4b	99	52.968	ENSGACG00000004298	tomm20a	100	52.086	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019286	Arid4b	100	74.094	ENSGAGG00000020544	ARID4B	98	74.041	Gopherus_agassizii
MGP_PahariEiJ_G0019286	Arid4b	100	89.810	ENSGGOG00000022080	ARID4B	100	89.658	Gorilla_gorilla
MGP_PahariEiJ_G0019286	Arid4b	100	88.973	ENSHGLG00000012546	ARID4B	100	88.669	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019286	Arid4b	100	88.973	ENSHGLG00100015436	ARID4B	100	88.669	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019286	Arid4b	91	73.608	ENSHCOG00000010376	tomm20a	95	73.786	Hippocampus_comes
MGP_PahariEiJ_G0019286	Arid4b	100	89.058	ENSSTOG00000002810	ARID4B	100	89.134	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019286	Arid4b	100	86.844	ENSJJAG00000021368	Arid4b	100	86.084	Jaculus_jaculus
MGP_PahariEiJ_G0019286	Arid4b	88	54.028	ENSKMAG00000010987	tomm20a	98	52.133	Kryptolebias_marmoratus
MGP_PahariEiJ_G0019286	Arid4b	99	88.271	ENSLAFG00000014295	ARID4B	100	87.738	Loxodonta_africana
MGP_PahariEiJ_G0019286	Arid4b	100	89.886	ENSMFAG00000044016	ARID4B	100	89.734	Macaca_fascicularis
MGP_PahariEiJ_G0019286	Arid4b	100	89.886	ENSMMUG00000007141	ARID4B	100	89.734	Macaca_mulatta
MGP_PahariEiJ_G0019286	Arid4b	100	89.430	ENSMNEG00000014840	ARID4B	100	89.202	Macaca_nemestrina
MGP_PahariEiJ_G0019286	Arid4b	99	89.985	ENSMLEG00000033583	ARID4B	100	89.832	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019286	Arid4b	94	50.505	ENSMAMG00000017134	tomm20a	99	51.046	Mastacembelus_armatus
MGP_PahariEiJ_G0019286	Arid4b	100	76.662	ENSMGAG00000011896	ARID4B	100	76.302	Meleagris_gallopavo
MGP_PahariEiJ_G0019286	Arid4b	100	90.205	ENSMICG00000016358	ARID4B	100	90.053	Microcebus_murinus
MGP_PahariEiJ_G0019286	Arid4b	87	75.545	ENSMMOG00000000561	tomm20a	69	74.515	Mola_mola
MGP_PahariEiJ_G0019286	Arid4b	100	82.612	ENSMODG00000008417	ARID4B	100	82.156	Monodelphis_domestica
MGP_PahariEiJ_G0019286	Arid4b	100	98.250	MGP_CAROLIEiJ_G0018236	Arid4b	100	98.250	Mus_caroli
MGP_PahariEiJ_G0019286	Arid4b	100	97.489	ENSMUSG00000039219	Arid4b	100	97.489	Mus_musculus
MGP_PahariEiJ_G0019286	Arid4b	100	97.489	MGP_SPRETEiJ_G0019094	Arid4b	100	97.489	Mus_spretus
MGP_PahariEiJ_G0019286	Arid4b	100	88.365	ENSMPUG00000002906	ARID4B	100	88.061	Mustela_putorius_furo
MGP_PahariEiJ_G0019286	Arid4b	99	86.550	ENSMLUG00000016232	ARID4B	100	85.942	Myotis_lucifugus
MGP_PahariEiJ_G0019286	Arid4b	100	87.964	ENSNGAG00000014629	Arid4b	100	87.661	Nannospalax_galili
MGP_PahariEiJ_G0019286	Arid4b	88	73.723	ENSNBRG00000019684	tomm20a	98	73.723	Neolamprologus_brichardi
MGP_PahariEiJ_G0019286	Arid4b	100	89.962	ENSNLEG00000002665	ARID4B	100	89.810	Nomascus_leucogenys
MGP_PahariEiJ_G0019286	Arid4b	100	88.897	ENSODEG00000005373	ARID4B	100	88.441	Octodon_degus
MGP_PahariEiJ_G0019286	Arid4b	99	89.718	ENSOCUG00000006605	ARID4B	100	89.718	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019286	Arid4b	100	52.967	ENSORLG00000012510	tomm20a	100	53.218	Oryzias_latipes
MGP_PahariEiJ_G0019286	Arid4b	89	74.279	ENSORLG00020013988	tomm20a	99	73.976	Oryzias_latipes_hni
MGP_PahariEiJ_G0019286	Arid4b	89	74.879	ENSORLG00015022835	tomm20a	99	74.576	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019286	Arid4b	99	80.535	ENSOGAG00000012476	ARID4B	55	79.384	Otolemur_garnettii
MGP_PahariEiJ_G0019286	Arid4b	99	86.585	ENSOARG00000003481	ARID4B	97	86.585	Ovis_aries
MGP_PahariEiJ_G0019286	Arid4b	100	89.582	ENSPPAG00000031651	ARID4B	100	89.354	Pan_paniscus
MGP_PahariEiJ_G0019286	Arid4b	100	88.289	ENSPPRG00000013739	ARID4B	100	87.757	Panthera_pardus
MGP_PahariEiJ_G0019286	Arid4b	100	86.388	ENSPTIG00000012520	ARID4B	100	85.856	Panthera_tigris_altaica
MGP_PahariEiJ_G0019286	Arid4b	85	88.230	ENSPTRG00000048786	-	95	87.960	Pan_troglodytes
MGP_PahariEiJ_G0019286	Arid4b	100	89.734	ENSPTRG00000002129	ARID4B	100	89.506	Pan_troglodytes
MGP_PahariEiJ_G0019286	Arid4b	99	89.414	ENSPANG00000013611	ARID4B	100	89.261	Papio_anubis
MGP_PahariEiJ_G0019286	Arid4b	93	74.676	ENSPSIG00000011632	ARID4B	99	75.223	Pelodiscus_sinensis
MGP_PahariEiJ_G0019286	Arid4b	100	81.549	ENSPCIG00000029756	ARID4B	100	81.625	Phascolarctos_cinereus
MGP_PahariEiJ_G0019286	Arid4b	100	89.506	ENSPPYG00000000098	ARID4B	100	89.278	Pongo_abelii
MGP_PahariEiJ_G0019286	Arid4b	100	89.894	ENSPCOG00000024328	ARID4B	100	89.818	Propithecus_coquereli
MGP_PahariEiJ_G0019286	Arid4b	100	84.259	ENSPVAG00000015159	ARID4B	100	83.574	Pteropus_vampyrus
MGP_PahariEiJ_G0019286	Arid4b	89	96.309	ENSRNOG00000016391	LOC100912163	99	96.309	Rattus_norvegicus
MGP_PahariEiJ_G0019286	Arid4b	99	82.026	ENSRBIG00000042029	ARID4B	100	81.569	Rhinopithecus_bieti
MGP_PahariEiJ_G0019286	Arid4b	100	89.886	ENSRROG00000045203	ARID4B	100	89.734	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019286	Arid4b	83	88.564	ENSSBOG00000020196	ARID4B	100	88.381	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019286	Arid4b	100	82.348	ENSSHAG00000015214	ARID4B	100	82.727	Sarcophilus_harrisii
MGP_PahariEiJ_G0019286	Arid4b	76	41.097	ENSSFOG00015008923	tomm20a	83	46.467	Scleropages_formosus
MGP_PahariEiJ_G0019286	Arid4b	54	58.554	ENSSFOG00015000132	arid4b	51	59.275	Scleropages_formosus
MGP_PahariEiJ_G0019286	Arid4b	100	75.698	ENSSPUG00000015466	ARID4B	98	75.245	Sphenodon_punctatus
MGP_PahariEiJ_G0019286	Arid4b	100	88.517	ENSSSCG00000010156	ARID4B	100	88.137	Sus_scrofa
MGP_PahariEiJ_G0019286	Arid4b	100	77.221	ENSTGUG00000010246	ARID4B	100	76.234	Taeniopygia_guttata
MGP_PahariEiJ_G0019286	Arid4b	56	46.709	ENSTRUG00000002893	tomm20a	85	45.859	Takifugu_rubripes
MGP_PahariEiJ_G0019286	Arid4b	80	84.154	ENSTBEG00000003961	ARID4B	80	82.655	Tupaia_belangeri
MGP_PahariEiJ_G0019286	Arid4b	100	88.137	ENSTTRG00000002228	ARID4B	100	87.376	Tursiops_truncatus
MGP_PahariEiJ_G0019286	Arid4b	99	88.367	ENSUMAG00000006905	ARID4B	100	87.741	Ursus_maritimus
MGP_PahariEiJ_G0019286	Arid4b	69	90.500	ENSVPAG00000006841	ARID4B	69	90.500	Vicugna_pacos
MGP_PahariEiJ_G0019286	Arid4b	99	87.982	ENSVVUG00000008154	ARID4B	99	87.982	Vulpes_vulpes
MGP_PahariEiJ_G0019286	Arid4b	100	61.228	ENSXETG00000024651	arid4b	100	60.495	Xenopus_tropicalis
MGP_PahariEiJ_G0019286	Arid4b	99	51.076	ENSXMAG00000006538	tomm20a	100	51.061	Xiphophorus_maculatus