EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019324 (Gene tree)
Gene ID: 110334087
Gene Symbol: Zkscan4
Alias: -
Full Name: zinc finger protein with KRAB and SCAN domains 3-like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 6603 bases
Position: chr16:24807551-24814153
Accession: 110334087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	1	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	2	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	3	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	4	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	5	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	6	7
MGP_PahariEiJ_P0040387	zf-C2H2	PF00096.26	1.9e-41	7	7
MGP_PahariEiJ_P0040387	zf-met	PF12874.7	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0040387	-	2413	XM_021215942	MGP_PahariEiJ_P0040387	478 (aa)	XP_021071601	UPI000A306029

Gene Model

Click here to download MGP_PahariEiJ_G0019324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0019324	Zkscan4	67	51.316	MGP_PahariEiJ_G0023447	Zfp51	97	51.316
MGP_PahariEiJ_G0019324	Zkscan4	54	48.235	MGP_PahariEiJ_G0021178	Zfp93	93	48.235
MGP_PahariEiJ_G0019324	Zkscan4	50	48.927	MGP_PahariEiJ_G0021172	Zfp112	57	48.927
MGP_PahariEiJ_G0019324	Zkscan4	56	51.938	MGP_PahariEiJ_G0021173	Zfp235	73	51.938
MGP_PahariEiJ_G0019324	Zkscan4	53	50.505	MGP_PahariEiJ_G0017567	Zfp867	77	50.505
MGP_PahariEiJ_G0019324	Zkscan4	53	52.083	MGP_PahariEiJ_G0017441	Zfp354a	69	52.083
MGP_PahariEiJ_G0019324	Zkscan4	51	44.720	MGP_PahariEiJ_G0016960	Zbtb49	71	47.222
MGP_PahariEiJ_G0019324	Zkscan4	50	56.757	MGP_PahariEiJ_G0022533	Zfp637	71	47.442
MGP_PahariEiJ_G0019324	Zkscan4	68	54.839	MGP_PahariEiJ_G0021177	Zfp108	65	54.839
MGP_PahariEiJ_G0019324	Zkscan4	53	34.555	MGP_PahariEiJ_G0021013	Zfp784	65	42.466
MGP_PahariEiJ_G0019324	Zkscan4	60	49.286	MGP_PahariEiJ_G0015741	Zfp759	93	46.083
MGP_PahariEiJ_G0019324	Zkscan4	52	41.423	MGP_PahariEiJ_G0012663	-	78	43.891
MGP_PahariEiJ_G0019324	Zkscan4	53	50.526	MGP_PahariEiJ_G0021209	Zfp574	59	50.526
MGP_PahariEiJ_G0019324	Zkscan4	53	49.576	MGP_PahariEiJ_G0021180	Zfp94	70	49.576
MGP_PahariEiJ_G0019324	Zkscan4	53	47.482	MGP_PahariEiJ_G0022203	Prdm5	78	47.482
MGP_PahariEiJ_G0019324	Zkscan4	52	45.223	MGP_PahariEiJ_G0021003	Zfp628	61	46.711
MGP_PahariEiJ_G0019324	Zkscan4	54	45.946	MGP_PahariEiJ_G0022097	Repin1	95	45.946
MGP_PahariEiJ_G0019324	Zkscan4	53	35.874	MGP_PahariEiJ_G0026165	Zfp64	70	35.874
MGP_PahariEiJ_G0019324	Zkscan4	53	56.522	MGP_PahariEiJ_G0025706	Zfp661	53	54.225
MGP_PahariEiJ_G0019324	Zkscan4	51	47.170	MGP_PahariEiJ_G0013707	Zfp768	53	45.690
MGP_PahariEiJ_G0019324	Zkscan4	53	35.294	MGP_PahariEiJ_G0023018	Zfp319	88	34.902
MGP_PahariEiJ_G0019324	Zkscan4	54	52.899	MGP_PahariEiJ_G0012724	Zfp420	98	51.982
MGP_PahariEiJ_G0019324	Zkscan4	56	50.459	MGP_PahariEiJ_G0017280	Gfi1	99	50.459
MGP_PahariEiJ_G0019324	Zkscan4	53	54.491	MGP_PahariEiJ_G0023178	Zfp1	67	54.491
MGP_PahariEiJ_G0019324	Zkscan4	54	52.174	MGP_PahariEiJ_G0023460	Zfp945	85	47.368
MGP_PahariEiJ_G0019324	Zkscan4	52	48.511	MGP_PahariEiJ_G0017548	Zfp39	58	48.511
MGP_PahariEiJ_G0019324	Zkscan4	53	48.305	MGP_PahariEiJ_G0012839	-	58	48.305
MGP_PahariEiJ_G0019324	Zkscan4	58	51.678	MGP_PahariEiJ_G0017434	Zfp354b	75	51.678
MGP_PahariEiJ_G0019324	Zkscan4	54	50.628	MGP_PahariEiJ_G0019959	Zfp251	66	47.639
MGP_PahariEiJ_G0019324	Zkscan4	53	46.725	MGP_PahariEiJ_G0015756	Zfp748	91	46.725
MGP_PahariEiJ_G0019324	Zkscan4	53	43.946	MGP_PahariEiJ_G0021668	Zfp882	85	43.946

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019324	Zkscan4	99	63.265	ENSCGRG00001006591	Zkscan3	96	60.111	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019324	Zkscan4	99	63.265	ENSCGRG00000001582	Zkscan3	96	60.111	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019324	Zkscan4	99	62.547	ENSJJAG00000004576	-	96	62.547	Jaculus_jaculus
MGP_PahariEiJ_G0019324	Zkscan4	99	63.501	ENSMAUG00000009785	Zkscan3	96	60.335	Mesocricetus_auratus
MGP_PahariEiJ_G0019324	Zkscan4	99	59.594	ENSMOCG00000017860	Zkscan3	97	59.779	Microtus_ochrogaster
MGP_PahariEiJ_G0019324	Zkscan4	99	90.656	MGP_CAROLIEiJ_G0018274	Zkscan4	99	89.861	Mus_caroli
MGP_PahariEiJ_G0019324	Zkscan4	99	96.211	ENSMUSG00000054931	Zkscan4	99	96.211	Mus_musculus
MGP_PahariEiJ_G0019324	Zkscan4	99	77.596	ENSMUSG00000021327	Zkscan3	84	77.817	Mus_musculus
MGP_PahariEiJ_G0019324	Zkscan4	99	96.421	MGP_SPRETEiJ_G0019129	Zkscan4	99	96.421	Mus_spretus
MGP_PahariEiJ_G0019324	Zkscan4	100	54.745	ENSPCAG00000000195	ZKSCAN4	61	70.149	Procavia_capensis
MGP_PahariEiJ_G0019324	Zkscan4	99	57.770	ENSSSCG00000001204	ZKSCAN4	100	50.273	Sus_scrofa
MGP_PahariEiJ_G0019324	Zkscan4	71	65.489	ENSTTRG00000015632	-	100	65.489	Tursiops_truncatus