EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019417 (Gene tree)
Gene ID: 110333855
Gene Symbol: Tdp2
Alias: D13Ertd656e|Ttrap
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 8329 bases
Position: chr16:28726316-28734644
Accession: 110333855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0040542	Exo_endo_phos	PF03372.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0040542	-	1978	XM_021215610	MGP_PahariEiJ_P0040542	370 (aa)	XP_021071269	UPI000A3109BF
MGP_PahariEiJ_T0040543	-	554	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0019417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019417	Tdp2	91	66.862	ENSG00000111802	TDP2	91	73.741	Homo_sapiens
MGP_PahariEiJ_G0019417	Tdp2	67	52.756	ENSAPOG00000018379	-	89	52.756	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019417	Tdp2	75	73.214	ENSAMEG00000010230	TDP2	100	73.214	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019417	Tdp2	71	50.000	ENSAPEG00000004208	-	95	50.000	Amphiprion_percula
MGP_PahariEiJ_G0019417	Tdp2	68	50.973	ENSATEG00000010663	-	83	50.973	Anabas_testudineus
MGP_PahariEiJ_G0019417	Tdp2	91	58.876	ENSACAG00000002332	TDP2	95	58.405	Anolis_carolinensis
MGP_PahariEiJ_G0019417	Tdp2	91	68.035	ENSANAG00000020033	TDP2	96	67.435	Aotus_nancymaae
MGP_PahariEiJ_G0019417	Tdp2	73	48.252	ENSACLG00000016174	tdp2b	96	48.252	Astatotilapia_calliptera
MGP_PahariEiJ_G0019417	Tdp2	75	47.945	ENSACLG00000016132	tdp2b	98	47.945	Astatotilapia_calliptera
MGP_PahariEiJ_G0019417	Tdp2	66	55.466	ENSACLG00000016148	tdp2b	87	55.466	Astatotilapia_calliptera
MGP_PahariEiJ_G0019417	Tdp2	93	46.809	ENSAMXG00000011775	tdp2b	98	47.185	Astyanax_mexicanus
MGP_PahariEiJ_G0019417	Tdp2	68	51.383	ENSAMXG00000036549	tdp2a	83	51.383	Astyanax_mexicanus
MGP_PahariEiJ_G0019417	Tdp2	91	67.442	ENSBTAG00000000365	TDP2	96	66.857	Bos_taurus
MGP_PahariEiJ_G0019417	Tdp2	88	33.131	WBGene00013405	tdpt-1	85	33.131	Caenorhabditis_elegans
MGP_PahariEiJ_G0019417	Tdp2	94	66.286	ENSCJAG00000006074	TDP2	91	73.381	Callithrix_jacchus
MGP_PahariEiJ_G0019417	Tdp2	94	66.000	ENSCJAG00000021963	-	96	65.994	Callithrix_jacchus
MGP_PahariEiJ_G0019417	Tdp2	91	67.059	ENSCAFG00000010428	TDP2	96	74.643	Canis_familiaris
MGP_PahariEiJ_G0019417	Tdp2	75	74.643	ENSCAFG00020009994	TDP2	96	74.643	Canis_lupus_dingo
MGP_PahariEiJ_G0019417	Tdp2	78	73.220	ENSCHIG00000015294	-	95	75.532	Capra_hircus
MGP_PahariEiJ_G0019417	Tdp2	82	67.532	ENSTSYG00000037199	TDP2	99	67.857	Carlito_syrichta
MGP_PahariEiJ_G0019417	Tdp2	91	67.353	ENSCPOG00000006390	TDP2	97	66.571	Cavia_porcellus
MGP_PahariEiJ_G0019417	Tdp2	94	67.143	ENSCCAG00000022734	TDP2	91	74.460	Cebus_capucinus
MGP_PahariEiJ_G0019417	Tdp2	91	67.742	ENSCATG00000022076	TDP2	91	74.820	Cercocebus_atys
MGP_PahariEiJ_G0019417	Tdp2	94	65.330	ENSCLAG00000002072	TDP2	95	66.569	Chinchilla_lanigera
MGP_PahariEiJ_G0019417	Tdp2	94	66.857	ENSCSAG00000007769	TDP2	97	67.147	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019417	Tdp2	91	58.702	ENSCPBG00000006551	TDP2	87	58.529	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019417	Tdp2	91	67.449	ENSCANG00000040122	TDP2	92	74.460	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019417	Tdp2	100	83.514	ENSCGRG00001000384	Tdp2	100	83.646	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019417	Tdp2	92	80.645	ENSCGRG00000010250	Tdp2	96	80.802	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019417	Tdp2	91	48.011	ENSCVAG00000003114	tdp2b	96	48.011	Cyprinodon_variegatus
MGP_PahariEiJ_G0019417	Tdp2	90	46.006	ENSDARG00000035954	tdp2b	94	46.006	Danio_rerio
MGP_PahariEiJ_G0019417	Tdp2	66	48.387	ENSDARG00000069941	tdp2a	55	48.387	Danio_rerio
MGP_PahariEiJ_G0019417	Tdp2	98	64.481	ENSDNOG00000044082	TDP2	94	66.087	Dasypus_novemcinctus
MGP_PahariEiJ_G0019417	Tdp2	74	72.662	ENSETEG00000019096	TDP2	100	72.662	Echinops_telfairi
MGP_PahariEiJ_G0019417	Tdp2	70	51.711	ENSEBUG00000006535	tdp2a	61	51.711	Eptatretus_burgeri
MGP_PahariEiJ_G0019417	Tdp2	91	67.449	ENSEASG00005007656	TDP2	96	66.859	Equus_asinus_asinus
MGP_PahariEiJ_G0019417	Tdp2	91	67.155	ENSECAG00000014264	TDP2	96	66.571	Equus_caballus
MGP_PahariEiJ_G0019417	Tdp2	91	65.882	ENSEEUG00000010776	TDP2	96	65.318	Erinaceus_europaeus
MGP_PahariEiJ_G0019417	Tdp2	67	49.799	ENSELUG00000009321	tdp2a	77	49.799	Esox_lucius
MGP_PahariEiJ_G0019417	Tdp2	90	48.209	ENSELUG00000016449	tdp2b	95	48.209	Esox_lucius
MGP_PahariEiJ_G0019417	Tdp2	96	64.444	ENSFCAG00000025612	TDP2	96	65.994	Felis_catus
MGP_PahariEiJ_G0019417	Tdp2	91	54.412	ENSFALG00000004710	TDP2	94	54.545	Ficedula_albicollis
MGP_PahariEiJ_G0019417	Tdp2	74	73.022	ENSFDAG00000006512	TDP2	96	73.022	Fukomys_damarensis
MGP_PahariEiJ_G0019417	Tdp2	72	47.985	ENSFHEG00000013560	-	92	47.985	Fundulus_heteroclitus
MGP_PahariEiJ_G0019417	Tdp2	91	58.892	ENSGALG00000013637	TDP2	94	58.427	Gallus_gallus
MGP_PahariEiJ_G0019417	Tdp2	95	56.425	ENSGAGG00000002853	TDP2	87	57.941	Gopherus_agassizii
MGP_PahariEiJ_G0019417	Tdp2	91	66.569	ENSGGOG00000014237	TDP2	91	73.381	Gorilla_gorilla
MGP_PahariEiJ_G0019417	Tdp2	55	53.810	ENSHBUG00000005421	-	79	57.592	Haplochromis_burtoni
MGP_PahariEiJ_G0019417	Tdp2	99	48.825	ENSHBUG00000002714	tdp2b	94	50.857	Haplochromis_burtoni
MGP_PahariEiJ_G0019417	Tdp2	94	65.330	ENSHGLG00000008655	TDP2	96	65.889	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019417	Tdp2	94	65.330	ENSHGLG00100019087	TDP2	96	65.889	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019417	Tdp2	90	47.740	ENSIPUG00000013691	tdp2b	94	47.740	Ictalurus_punctatus
MGP_PahariEiJ_G0019417	Tdp2	92	68.235	ENSJJAG00000021685	Tdp2	98	68.235	Jaculus_jaculus
MGP_PahariEiJ_G0019417	Tdp2	68	50.196	ENSKMAG00000015485	-	82	50.196	Kryptolebias_marmoratus
MGP_PahariEiJ_G0019417	Tdp2	91	53.890	ENSLACG00000008852	TDP2	95	53.890	Latimeria_chalumnae
MGP_PahariEiJ_G0019417	Tdp2	74	57.091	ENSLOCG00000005817	tdp2b	98	57.091	Lepisosteus_oculatus
MGP_PahariEiJ_G0019417	Tdp2	91	66.862	ENSLAFG00000002567	TDP2	99	66.571	Loxodonta_africana
MGP_PahariEiJ_G0019417	Tdp2	91	68.035	ENSMFAG00000045296	TDP2	91	75.180	Macaca_fascicularis
MGP_PahariEiJ_G0019417	Tdp2	91	68.035	ENSMMUG00000009803	TDP2	97	67.435	Macaca_mulatta
MGP_PahariEiJ_G0019417	Tdp2	91	68.035	ENSMNEG00000038003	TDP2	91	75.180	Macaca_nemestrina
MGP_PahariEiJ_G0019417	Tdp2	91	67.742	ENSMLEG00000028883	TDP2	91	74.820	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019417	Tdp2	93	47.486	ENSMAMG00000013654	tdp2b	94	49.558	Mastacembelus_armatus
MGP_PahariEiJ_G0019417	Tdp2	66	55.061	ENSMZEG00005004153	tdp2b	87	55.061	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	77	49.481	ENSMZEG00005004077	tdp2b	97	49.481	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	74	48.561	ENSMZEG00005004126	tdp2b	96	48.582	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	65	52.846	ENSMZEG00005004055	tdp2b	81	52.846	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	99	48.177	ENSMZEG00005003950	tdp2b	95	50.142	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	67	44.487	ENSMZEG00005003980	-	85	44.487	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	67	49.802	ENSMZEG00005004103	tdp2b	84	49.802	Maylandia_zebra
MGP_PahariEiJ_G0019417	Tdp2	91	59.118	ENSMGAG00000008014	TDP2	93	58.908	Meleagris_gallopavo
MGP_PahariEiJ_G0019417	Tdp2	100	83.514	ENSMAUG00000014451	Tdp2	100	84.450	Mesocricetus_auratus
MGP_PahariEiJ_G0019417	Tdp2	96	64.167	ENSMICG00000000039	TDP2	94	73.022	Microcebus_murinus
MGP_PahariEiJ_G0019417	Tdp2	100	81.622	ENSMOCG00000002823	Tdp2	100	81.622	Microtus_ochrogaster
MGP_PahariEiJ_G0019417	Tdp2	85	57.099	ENSMODG00000011653	TDP2	95	58.654	Monodelphis_domestica
MGP_PahariEiJ_G0019417	Tdp2	77	46.259	ENSMALG00000005368	-	98	46.259	Monopterus_albus
MGP_PahariEiJ_G0019417	Tdp2	100	91.892	MGP_CAROLIEiJ_G0018354	Tdp2	100	91.892	Mus_caroli
MGP_PahariEiJ_G0019417	Tdp2	100	92.703	ENSMUSG00000035958	Tdp2	100	92.703	Mus_musculus
MGP_PahariEiJ_G0019417	Tdp2	100	92.473	MGP_SPRETEiJ_G0019220	Tdp2	100	91.667	Mus_spretus
MGP_PahariEiJ_G0019417	Tdp2	91	66.764	ENSMPUG00000004516	TDP2	96	66.474	Mustela_putorius_furo
MGP_PahariEiJ_G0019417	Tdp2	94	61.932	ENSMLUG00000013506	TDP2	94	63.529	Myotis_lucifugus
MGP_PahariEiJ_G0019417	Tdp2	99	71.351	ENSNGAG00000001375	Tdp2	99	70.811	Nannospalax_galili
MGP_PahariEiJ_G0019417	Tdp2	92	67.733	ENSNLEG00000002447	TDP2	97	67.733	Nomascus_leucogenys
MGP_PahariEiJ_G0019417	Tdp2	92	66.087	ENSOPRG00000016299	TDP2	99	66.087	Ochotona_princeps
MGP_PahariEiJ_G0019417	Tdp2	74	74.460	ENSODEG00000014018	TDP2	95	74.460	Octodon_degus
MGP_PahariEiJ_G0019417	Tdp2	91	66.176	ENSOCUG00000013773	TDP2	94	65.982	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019417	Tdp2	68	48.249	ENSORLG00000001661	-	94	48.249	Oryzias_latipes
MGP_PahariEiJ_G0019417	Tdp2	68	48.249	ENSORLG00020004634	-	94	48.249	Oryzias_latipes_hni
MGP_PahariEiJ_G0019417	Tdp2	68	43.798	ENSORLG00015008190	-	93	43.798	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019417	Tdp2	68	50.000	ENSOMEG00000015899	-	93	50.400	Oryzias_melastigma
MGP_PahariEiJ_G0019417	Tdp2	96	63.585	ENSOGAG00000025303	TDP2	95	64.265	Otolemur_garnettii
MGP_PahariEiJ_G0019417	Tdp2	91	67.155	ENSPPAG00000029023	TDP2	92	74.101	Pan_paniscus
MGP_PahariEiJ_G0019417	Tdp2	96	64.722	ENSPPRG00000015398	TDP2	96	66.282	Panthera_pardus
MGP_PahariEiJ_G0019417	Tdp2	74	74.460	ENSPTIG00000018574	TDP2	95	74.460	Panthera_tigris_altaica
MGP_PahariEiJ_G0019417	Tdp2	91	67.155	ENSPTRG00000017778	TDP2	91	74.101	Pan_troglodytes
MGP_PahariEiJ_G0019417	Tdp2	91	67.449	ENSPANG00000017590	TDP2	91	74.460	Papio_anubis
MGP_PahariEiJ_G0019417	Tdp2	93	48.603	ENSPKIG00000006483	tdp2b	95	49.429	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019417	Tdp2	68	67.717	ENSPSIG00000004948	TDP2	88	67.717	Pelodiscus_sinensis
MGP_PahariEiJ_G0019417	Tdp2	100	84.054	ENSPEMG00000001788	Tdp2	100	84.054	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019417	Tdp2	67	46.442	ENSPMAG00000001570	tdp2b	97	46.442	Petromyzon_marinus
MGP_PahariEiJ_G0019417	Tdp2	91	58.601	ENSPCIG00000007316	TDP2	91	58.166	Phascolarctos_cinereus
MGP_PahariEiJ_G0019417	Tdp2	69	48.276	ENSPFOG00000017990	-	92	48.276	Poecilia_formosa
MGP_PahariEiJ_G0019417	Tdp2	69	47.893	ENSPLAG00000019439	-	81	47.893	Poecilia_latipinna
MGP_PahariEiJ_G0019417	Tdp2	66	49.600	ENSPMEG00000010824	-	84	49.600	Poecilia_mexicana
MGP_PahariEiJ_G0019417	Tdp2	91	66.862	ENSPPYG00000016282	TDP2	89	66.282	Pongo_abelii
MGP_PahariEiJ_G0019417	Tdp2	91	66.176	ENSPCOG00000021415	TDP2	98	72.760	Propithecus_coquereli
MGP_PahariEiJ_G0019417	Tdp2	66	51.711	ENSPNYG00000011504	tdp2b	86	51.711	Pundamilia_nyererei
MGP_PahariEiJ_G0019417	Tdp2	99	47.258	ENSPNYG00000011532	tdp2b	94	49.143	Pundamilia_nyererei
MGP_PahariEiJ_G0019417	Tdp2	66	52.439	ENSPNAG00000022162	tdp2a	63	52.439	Pygocentrus_nattereri
MGP_PahariEiJ_G0019417	Tdp2	100	86.216	ENSRNOG00000018246	Tdp2	100	86.216	Rattus_norvegicus
MGP_PahariEiJ_G0019417	Tdp2	91	67.449	ENSRBIG00000037119	TDP2	92	74.460	Rhinopithecus_bieti
MGP_PahariEiJ_G0019417	Tdp2	91	67.155	ENSRROG00000005025	TDP2	92	74.101	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019417	Tdp2	94	67.143	ENSSBOG00000028734	TDP2	91	74.820	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019417	Tdp2	99	56.800	ENSSHAG00000002506	TDP2	99	56.800	Sarcophilus_harrisii
MGP_PahariEiJ_G0019417	Tdp2	75	50.397	ENSSFOG00015011322	-	73	50.397	Scleropages_formosus
MGP_PahariEiJ_G0019417	Tdp2	74	70.251	ENSSARG00000013547	TDP2	100	70.251	Sorex_araneus
MGP_PahariEiJ_G0019417	Tdp2	91	58.405	ENSSPUG00000008288	TDP2	95	58.405	Sphenodon_punctatus
MGP_PahariEiJ_G0019417	Tdp2	91	67.742	ENSSSCG00000001092	TDP2	96	67.147	Sus_scrofa
MGP_PahariEiJ_G0019417	Tdp2	68	63.780	ENSTGUG00000009035	TDP2	97	63.780	Taeniopygia_guttata
MGP_PahariEiJ_G0019417	Tdp2	78	47.440	ENSTRUG00000012218	-	98	47.440	Takifugu_rubripes
MGP_PahariEiJ_G0019417	Tdp2	99	45.646	ENSTRUG00000014347	tdp2b	99	45.646	Takifugu_rubripes
MGP_PahariEiJ_G0019417	Tdp2	68	50.000	ENSTNIG00000010260	TDP2	97	50.000	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019417	Tdp2	94	46.594	ENSTNIG00000017792	tdp2b	100	45.128	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019417	Tdp2	91	67.155	ENSTTRG00000016376	TDP2	96	66.859	Tursiops_truncatus
MGP_PahariEiJ_G0019417	Tdp2	92	64.826	ENSUAMG00000025939	TDP2	96	64.826	Ursus_americanus
MGP_PahariEiJ_G0019417	Tdp2	75	73.214	ENSUMAG00000020111	TDP2	93	73.214	Ursus_maritimus
MGP_PahariEiJ_G0019417	Tdp2	95	55.163	ENSXETG00000014826	tdp2	96	55.833	Xenopus_tropicalis
MGP_PahariEiJ_G0019417	Tdp2	69	48.846	ENSXCOG00000010778	-	72	48.846	Xiphophorus_couchianus
MGP_PahariEiJ_G0019417	Tdp2	69	48.846	ENSXMAG00000022252	-	74	49.225	Xiphophorus_maculatus