EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019497 (Gene tree)
Gene ID: 110334118
Gene Symbol: Rpp40
Alias: D8Bwg1265e|Rnasep1
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 11186 bases
Position: chr16:38996350-39007535
Accession: 110334118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0040712	Ribonuc_P_40	PF08584.11	4.2e-93	1	1
MGP_PahariEiJ_P0040715	Ribonuc_P_40	PF08584.11	7.2e-78	1	1
MGP_PahariEiJ_P0040713	Ribonuc_P_40	PF08584.11	4.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0040713	-	274	-	MGP_PahariEiJ_P0040713	83 (aa)	-	-
MGP_PahariEiJ_T0040712	-	4328	-	MGP_PahariEiJ_P0040712	363 (aa)	XP_021071634	UPI000A3051B9
MGP_PahariEiJ_T0040715	-	1053	XM_021215976	MGP_PahariEiJ_P0040715	340 (aa)	XP_021071635	UPI000A30AFF0
MGP_PahariEiJ_T0040714	-	3120	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0019497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSG00000124787	RPP40	100	82.941	Homo_sapiens
MGP_PahariEiJ_G0019497	Rpp40	77	48.438	ENSAPOG00000008660	rpp40	92	30.435	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019497	Rpp40	100	85.675	ENSAMEG00000012938	RPP40	100	85.675	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019497	Rpp40	98	37.255	ENSACIG00000003617	rpp40	98	37.255	Amphilophus_citrinellus
MGP_PahariEiJ_G0019497	Rpp40	98	37.535	ENSAOCG00000011846	rpp40	99	37.535	Amphiprion_ocellaris
MGP_PahariEiJ_G0019497	Rpp40	98	37.535	ENSAPEG00000001322	rpp40	99	37.535	Amphiprion_percula
MGP_PahariEiJ_G0019497	Rpp40	98	39.276	ENSATEG00000006584	rpp40	99	39.554	Anabas_testudineus
MGP_PahariEiJ_G0019497	Rpp40	77	82.812	ENSAPLG00000005691	RPP40	99	67.881	Anas_platyrhynchos
MGP_PahariEiJ_G0019497	Rpp40	99	64.067	ENSACAG00000006550	RPP40	88	64.067	Anolis_carolinensis
MGP_PahariEiJ_G0019497	Rpp40	100	80.441	ENSANAG00000029246	RPP40	100	80.441	Aotus_nancymaae
MGP_PahariEiJ_G0019497	Rpp40	98	39.437	ENSACLG00000015883	rpp40	96	39.437	Astatotilapia_calliptera
MGP_PahariEiJ_G0019497	Rpp40	77	71.875	ENSAMXG00000001755	rpp40	99	47.619	Astyanax_mexicanus
MGP_PahariEiJ_G0019497	Rpp40	100	83.196	ENSBTAG00000003332	RPP40	100	83.196	Bos_taurus
MGP_PahariEiJ_G0019497	Rpp40	100	80.992	ENSCJAG00000021373	RPP40	100	80.992	Callithrix_jacchus
MGP_PahariEiJ_G0019497	Rpp40	100	85.124	ENSCAFG00000009435	RPP40	100	85.124	Canis_familiaris
MGP_PahariEiJ_G0019497	Rpp40	100	85.124	ENSCAFG00020013380	RPP40	100	85.124	Canis_lupus_dingo
MGP_PahariEiJ_G0019497	Rpp40	100	82.920	ENSCHIG00000016849	RPP40	100	82.920	Capra_hircus
MGP_PahariEiJ_G0019497	Rpp40	100	85.000	ENSTSYG00000032857	RPP40	100	85.000	Carlito_syrichta
MGP_PahariEiJ_G0019497	Rpp40	90	76.453	ENSCAPG00000004957	RPP40	98	76.453	Cavia_aperea
MGP_PahariEiJ_G0019497	Rpp40	100	84.118	ENSCPOG00000005855	RPP40	100	84.118	Cavia_porcellus
MGP_PahariEiJ_G0019497	Rpp40	100	81.471	ENSCCAG00000019809	RPP40	100	81.471	Cebus_capucinus
MGP_PahariEiJ_G0019497	Rpp40	100	82.369	ENSCATG00000038787	RPP40	100	82.369	Cercocebus_atys
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSCLAG00000003235	RPP40	100	82.941	Chinchilla_lanigera
MGP_PahariEiJ_G0019497	Rpp40	100	82.645	ENSCSAG00000007307	RPP40	100	82.645	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019497	Rpp40	78	89.231	ENSCHOG00000005856	-	100	64.400	Choloepus_hoffmanni
MGP_PahariEiJ_G0019497	Rpp40	99	69.444	ENSCPBG00000009003	RPP40	99	69.444	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSCANG00000033965	RPP40	100	82.941	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019497	Rpp40	100	84.298	ENSCGRG00001018328	Rpp40	100	84.298	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019497	Rpp40	100	84.298	ENSCGRG00000011344	Rpp40	100	84.298	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019497	Rpp40	98	35.112	ENSCSEG00000015006	-	98	35.112	Cynoglossus_semilaevis
MGP_PahariEiJ_G0019497	Rpp40	66	50.909	ENSCVAG00000012169	rpp40	100	34.799	Cyprinodon_variegatus
MGP_PahariEiJ_G0019497	Rpp40	98	49.721	ENSDARG00000017605	rpp40	99	49.721	Danio_rerio
MGP_PahariEiJ_G0019497	Rpp40	82	78.788	ENSDNOG00000048136	RPP40	99	78.788	Dasypus_novemcinctus
MGP_PahariEiJ_G0019497	Rpp40	100	81.543	ENSDORG00000029944	-	100	81.543	Dipodomys_ordii
MGP_PahariEiJ_G0019497	Rpp40	100	61.662	ENSDORG00000011196	-	100	61.662	Dipodomys_ordii
MGP_PahariEiJ_G0019497	Rpp40	90	80.899	ENSETEG00000007458	RPP40	85	80.899	Echinops_telfairi
MGP_PahariEiJ_G0019497	Rpp40	98	46.197	ENSEBUG00000000386	rpp40	99	46.197	Eptatretus_burgeri
MGP_PahariEiJ_G0019497	Rpp40	100	84.298	ENSEASG00005012116	RPP40	80	84.298	Equus_asinus_asinus
MGP_PahariEiJ_G0019497	Rpp40	100	84.848	ENSECAG00000017247	RPP40	80	84.848	Equus_caballus
MGP_PahariEiJ_G0019497	Rpp40	68	85.366	ENSEEUG00000012087	RPP40	100	64.646	Erinaceus_europaeus
MGP_PahariEiJ_G0019497	Rpp40	98	48.883	ENSELUG00000017004	rpp40	99	48.883	Esox_lucius
MGP_PahariEiJ_G0019497	Rpp40	100	85.399	ENSFCAG00000009249	RPP40	100	85.399	Felis_catus
MGP_PahariEiJ_G0019497	Rpp40	77	82.812	ENSFALG00000013166	RPP40	100	64.526	Ficedula_albicollis
MGP_PahariEiJ_G0019497	Rpp40	100	83.747	ENSFDAG00000013001	-	100	83.747	Fukomys_damarensis
MGP_PahariEiJ_G0019497	Rpp40	80	67.123	ENSFDAG00000000265	-	99	67.123	Fukomys_damarensis
MGP_PahariEiJ_G0019497	Rpp40	98	39.216	ENSFHEG00000021429	rpp40	88	39.216	Fundulus_heteroclitus
MGP_PahariEiJ_G0019497	Rpp40	72	61.667	ENSGMOG00000018653	rpp40	100	39.130	Gadus_morhua
MGP_PahariEiJ_G0019497	Rpp40	99	66.469	ENSGALG00000036074	RPP40	99	66.469	Gallus_gallus
MGP_PahariEiJ_G0019497	Rpp40	82	35.906	ENSGAFG00000004189	-	98	35.906	Gambusia_affinis
MGP_PahariEiJ_G0019497	Rpp40	98	39.216	ENSGACG00000002472	rpp40	99	39.216	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019497	Rpp40	99	70.000	ENSGAGG00000012918	RPP40	99	70.000	Gopherus_agassizii
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSGGOG00000013764	RPP40	100	82.941	Gorilla_gorilla
MGP_PahariEiJ_G0019497	Rpp40	77	53.125	ENSHBUG00000009378	rpp40	94	38.485	Haplochromis_burtoni
MGP_PahariEiJ_G0019497	Rpp40	100	82.094	ENSHGLG00000004871	RPP40	100	82.094	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019497	Rpp40	100	82.369	ENSHGLG00100002080	RPP40	100	82.369	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019497	Rpp40	96	32.471	ENSHCOG00000013264	-	93	32.471	Hippocampus_comes
MGP_PahariEiJ_G0019497	Rpp40	99	47.222	ENSIPUG00000008951	RPP40	99	47.222	Ictalurus_punctatus
MGP_PahariEiJ_G0019497	Rpp40	100	83.747	ENSSTOG00000011199	RPP40	100	83.747	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019497	Rpp40	100	82.059	ENSJJAG00000020629	Rpp40	100	82.059	Jaculus_jaculus
MGP_PahariEiJ_G0019497	Rpp40	98	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
MGP_PahariEiJ_G0019497	Rpp40	98	38.375	ENSLBEG00000022724	rpp40	99	38.375	Labrus_bergylta
MGP_PahariEiJ_G0019497	Rpp40	78	81.538	ENSLACG00000014848	RPP40	99	60.000	Latimeria_chalumnae
MGP_PahariEiJ_G0019497	Rpp40	100	54.270	ENSLOCG00000011650	rpp40	100	54.270	Lepisosteus_oculatus
MGP_PahariEiJ_G0019497	Rpp40	78	90.769	ENSLAFG00000007530	RPP40	100	80.000	Loxodonta_africana
MGP_PahariEiJ_G0019497	Rpp40	100	82.647	ENSMFAG00000043100	RPP40	100	82.647	Macaca_fascicularis
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSMMUG00000004966	RPP40	100	82.941	Macaca_mulatta
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSMNEG00000041986	RPP40	100	82.941	Macaca_nemestrina
MGP_PahariEiJ_G0019497	Rpp40	98	74.328	ENSMLEG00000040851	RPP40	100	81.250	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019497	Rpp40	98	40.336	ENSMAMG00000019551	rpp40	98	40.336	Mastacembelus_armatus
MGP_PahariEiJ_G0019497	Rpp40	99	39.889	ENSMZEG00005019475	rpp40	99	39.889	Maylandia_zebra
MGP_PahariEiJ_G0019497	Rpp40	99	62.778	ENSMGAG00000004009	RPP40	99	62.778	Meleagris_gallopavo
MGP_PahariEiJ_G0019497	Rpp40	100	88.154	ENSMAUG00000010268	Rpp40	100	88.154	Mesocricetus_auratus
MGP_PahariEiJ_G0019497	Rpp40	100	83.824	ENSMICG00000003297	RPP40	100	83.824	Microcebus_murinus
MGP_PahariEiJ_G0019497	Rpp40	100	89.706	ENSMOCG00000000305	Rpp40	100	89.706	Microtus_ochrogaster
MGP_PahariEiJ_G0019497	Rpp40	98	33.333	ENSMMOG00000020591	-	99	33.333	Mola_mola
MGP_PahariEiJ_G0019497	Rpp40	100	77.473	ENSMODG00000009826	RPP40	100	77.473	Monodelphis_domestica
MGP_PahariEiJ_G0019497	Rpp40	98	38.375	ENSMALG00000020133	rpp40	99	38.936	Monopterus_albus
MGP_PahariEiJ_G0019497	Rpp40	100	100.000	MGP_CAROLIEiJ_G0018429	Rpp40	100	100.000	Mus_caroli
MGP_PahariEiJ_G0019497	Rpp40	100	100.000	ENSMUSG00000021418	Rpp40	99	100.000	Mus_musculus
MGP_PahariEiJ_G0019497	Rpp40	100	100.000	MGP_SPRETEiJ_G0019309	Rpp40	100	100.000	Mus_spretus
MGP_PahariEiJ_G0019497	Rpp40	100	84.848	ENSMPUG00000000530	RPP40	93	84.848	Mustela_putorius_furo
MGP_PahariEiJ_G0019497	Rpp40	100	82.369	ENSMLUG00000000501	RPP40	100	82.369	Myotis_lucifugus
MGP_PahariEiJ_G0019497	Rpp40	95	76.879	ENSNGAG00000022529	-	100	76.879	Nannospalax_galili
MGP_PahariEiJ_G0019497	Rpp40	100	87.059	ENSNGAG00000023955	-	100	87.059	Nannospalax_galili
MGP_PahariEiJ_G0019497	Rpp40	77	53.125	ENSNBRG00000017465	rpp40	86	38.158	Neolamprologus_brichardi
MGP_PahariEiJ_G0019497	Rpp40	100	81.471	ENSNLEG00000034397	RPP40	100	81.471	Nomascus_leucogenys
MGP_PahariEiJ_G0019497	Rpp40	100	72.176	ENSMEUG00000005300	RPP40	100	72.176	Notamacropus_eugenii
MGP_PahariEiJ_G0019497	Rpp40	88	82.274	ENSODEG00000006170	-	100	82.274	Octodon_degus
MGP_PahariEiJ_G0019497	Rpp40	100	82.369	ENSODEG00000007255	-	100	82.369	Octodon_degus
MGP_PahariEiJ_G0019497	Rpp40	100	78.237	ENSODEG00000018153	-	100	78.237	Octodon_degus
MGP_PahariEiJ_G0019497	Rpp40	99	39.335	ENSONIG00000014016	rpp40	99	39.335	Oreochromis_niloticus
MGP_PahariEiJ_G0019497	Rpp40	83	71.947	ENSOANG00000001200	RPP40	99	71.947	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0019497	Rpp40	99	73.130	ENSOCUG00000000354	RPP40	99	73.130	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019497	Rpp40	99	36.667	ENSORLG00000008242	-	100	36.667	Oryzias_latipes
MGP_PahariEiJ_G0019497	Rpp40	99	36.667	ENSORLG00020013745	-	91	36.667	Oryzias_latipes_hni
MGP_PahariEiJ_G0019497	Rpp40	99	36.944	ENSORLG00015000887	-	100	36.944	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019497	Rpp40	99	37.673	ENSOMEG00000002747	rpp40	100	37.673	Oryzias_melastigma
MGP_PahariEiJ_G0019497	Rpp40	100	84.022	ENSOGAG00000006055	RPP40	100	84.022	Otolemur_garnettii
MGP_PahariEiJ_G0019497	Rpp40	91	80.180	ENSOARG00000018783	RPP40	100	82.178	Ovis_aries
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSPPAG00000023703	RPP40	100	82.941	Pan_paniscus
MGP_PahariEiJ_G0019497	Rpp40	100	85.124	ENSPPRG00000005612	RPP40	100	85.124	Panthera_pardus
MGP_PahariEiJ_G0019497	Rpp40	100	78.788	ENSPTIG00000018847	RPP40	100	78.788	Panthera_tigris_altaica
MGP_PahariEiJ_G0019497	Rpp40	100	83.235	ENSPTRG00000017690	RPP40	100	83.235	Pan_troglodytes
MGP_PahariEiJ_G0019497	Rpp40	100	82.647	ENSPANG00000017865	RPP40	100	82.647	Papio_anubis
MGP_PahariEiJ_G0019497	Rpp40	98	50.559	ENSPKIG00000006311	rpp40	99	50.559	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019497	Rpp40	77	85.938	ENSPSIG00000007854	RPP40	100	72.072	Pelodiscus_sinensis
MGP_PahariEiJ_G0019497	Rpp40	92	83.439	ENSPEMG00000020809	Rpp40	91	83.439	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019497	Rpp40	98	43.089	ENSPMAG00000008412	rpp40	99	47.810	Petromyzon_marinus
MGP_PahariEiJ_G0019497	Rpp40	100	76.309	ENSPCIG00000010682	RPP40	100	76.309	Phascolarctos_cinereus
MGP_PahariEiJ_G0019497	Rpp40	98	35.655	ENSPFOG00000011460	rpp40	98	35.655	Poecilia_formosa
MGP_PahariEiJ_G0019497	Rpp40	98	35.854	ENSPLAG00000001334	rpp40	99	35.854	Poecilia_latipinna
MGP_PahariEiJ_G0019497	Rpp40	98	36.134	ENSPMEG00000007721	rpp40	99	36.134	Poecilia_mexicana
MGP_PahariEiJ_G0019497	Rpp40	98	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
MGP_PahariEiJ_G0019497	Rpp40	100	82.645	ENSPPYG00000016194	RPP40	100	82.645	Pongo_abelii
MGP_PahariEiJ_G0019497	Rpp40	51	82.609	ENSPCAG00000002700	-	99	82.609	Procavia_capensis
MGP_PahariEiJ_G0019497	Rpp40	100	85.294	ENSPCOG00000003907	RPP40	100	85.294	Propithecus_coquereli
MGP_PahariEiJ_G0019497	Rpp40	100	83.196	ENSPVAG00000011325	RPP40	100	83.196	Pteropus_vampyrus
MGP_PahariEiJ_G0019497	Rpp40	77	53.125	ENSPNYG00000004432	rpp40	98	39.262	Pundamilia_nyererei
MGP_PahariEiJ_G0019497	Rpp40	98	46.369	ENSPNAG00000019125	rpp40	99	46.369	Pygocentrus_nattereri
MGP_PahariEiJ_G0019497	Rpp40	100	92.837	ENSRNOG00000016226	Rpp40	100	92.837	Rattus_norvegicus
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSRBIG00000035800	RPP40	100	82.941	Rhinopithecus_bieti
MGP_PahariEiJ_G0019497	Rpp40	100	82.941	ENSRROG00000039116	RPP40	100	82.941	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019497	Rpp40	100	80.716	ENSSBOG00000020297	RPP40	100	80.716	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019497	Rpp40	100	53.906	ENSSHAG00000002102	RPP40	100	75.540	Sarcophilus_harrisii
MGP_PahariEiJ_G0019497	Rpp40	99	49.587	ENSSFOG00015001142	rpp40	81	49.587	Scleropages_formosus
MGP_PahariEiJ_G0019497	Rpp40	98	37.815	ENSSDUG00000007202	rpp40	99	37.815	Seriola_dumerili
MGP_PahariEiJ_G0019497	Rpp40	98	38.095	ENSSLDG00000017563	rpp40	99	38.095	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0019497	Rpp40	99	68.056	ENSSPUG00000017487	-	99	68.056	Sphenodon_punctatus
MGP_PahariEiJ_G0019497	Rpp40	77	79.688	ENSSPUG00000018950	-	100	66.780	Sphenodon_punctatus
MGP_PahariEiJ_G0019497	Rpp40	98	38.375	ENSSPAG00000022716	rpp40	99	38.375	Stegastes_partitus
MGP_PahariEiJ_G0019497	Rpp40	100	80.992	ENSSSCG00000000998	RPP40	100	80.992	Sus_scrofa
MGP_PahariEiJ_G0019497	Rpp40	99	66.480	ENSTGUG00000002258	-	100	66.480	Taeniopygia_guttata
MGP_PahariEiJ_G0019497	Rpp40	77	82.812	ENSTGUG00000015246	-	100	70.056	Taeniopygia_guttata
MGP_PahariEiJ_G0019497	Rpp40	98	40.336	ENSTRUG00000003755	rpp40	99	40.336	Takifugu_rubripes
MGP_PahariEiJ_G0019497	Rpp40	99	38.611	ENSTNIG00000003077	rpp40	99	38.611	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019497	Rpp40	100	57.031	ENSTBEG00000014467	-	73	58.800	Tupaia_belangeri
MGP_PahariEiJ_G0019497	Rpp40	99	76.519	ENSTTRG00000007319	RPP40	100	76.519	Tursiops_truncatus
MGP_PahariEiJ_G0019497	Rpp40	100	86.471	ENSUAMG00000002159	RPP40	100	86.471	Ursus_americanus
MGP_PahariEiJ_G0019497	Rpp40	100	86.226	ENSUMAG00000018639	RPP40	94	86.226	Ursus_maritimus
MGP_PahariEiJ_G0019497	Rpp40	81	61.565	ENSVPAG00000004652	-	99	61.565	Vicugna_pacos
MGP_PahariEiJ_G0019497	Rpp40	100	84.848	ENSVVUG00000005451	RPP40	100	84.848	Vulpes_vulpes
MGP_PahariEiJ_G0019497	Rpp40	99	54.167	ENSXETG00000017617	rpp40	100	53.699	Xenopus_tropicalis
MGP_PahariEiJ_G0019497	Rpp40	77	39.062	ENSXCOG00000019991	-	86	31.884	Xiphophorus_couchianus
MGP_PahariEiJ_G0019497	Rpp40	99	32.764	ENSXMAG00000024940	rpp40	99	32.764	Xiphophorus_maculatus