EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019584 (Gene tree)
Gene ID: 110333741
Gene Symbol: Secisbp2
Alias: 2210413N07Rik|2810012K13Rik|SBP2
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 32220 bases
Position: chr16:54461213-54493432
Accession: 110333741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0040947	Ribosomal_L7Ae	PF01248.26	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0040947	-	3317	XM_021215422	MGP_PahariEiJ_P0040947	856 (aa)	XP_021071081	UPI000A30E225
MGP_PahariEiJ_T0040948	-	1923	-	MGP_PahariEiJ_P0040948	414 (aa)	-	-
MGP_PahariEiJ_T0040949	-	604	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040952	-	799	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040951	-	774	-	-	- (aa)	-	-
MGP_PahariEiJ_T0040950	-	556	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0019584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019584	Secisbp2	100	71.013	ENSG00000187742	SECISBP2	100	71.013	Homo_sapiens
MGP_PahariEiJ_G0019584	Secisbp2	98	65.882	ENSAMEG00000003349	SECISBP2	98	65.882	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019584	Secisbp2	52	48.871	ENSAOCG00000019052	secisbp2	61	49.076	Amphiprion_ocellaris
MGP_PahariEiJ_G0019584	Secisbp2	51	49.156	ENSAPEG00000012971	secisbp2	61	48.156	Amphiprion_percula
MGP_PahariEiJ_G0019584	Secisbp2	53	47.379	ENSATEG00000001095	secisbp2	62	47.581	Anabas_testudineus
MGP_PahariEiJ_G0019584	Secisbp2	98	41.011	ENSAPLG00000013053	SECISBP2	99	41.124	Anas_platyrhynchos
MGP_PahariEiJ_G0019584	Secisbp2	100	70.198	ENSANAG00000028208	SECISBP2	100	70.198	Aotus_nancymaae
MGP_PahariEiJ_G0019584	Secisbp2	53	47.379	ENSACLG00000019976	secisbp2	62	47.984	Astatotilapia_calliptera
MGP_PahariEiJ_G0019584	Secisbp2	53	48.400	ENSAMXG00000015953	secisbp2	62	48.795	Astyanax_mexicanus
MGP_PahariEiJ_G0019584	Secisbp2	100	66.512	ENSBTAG00000001939	SECISBP2	100	74.849	Bos_taurus
MGP_PahariEiJ_G0019584	Secisbp2	100	70.431	ENSCJAG00000007806	SECISBP2	100	70.431	Callithrix_jacchus
MGP_PahariEiJ_G0019584	Secisbp2	100	67.903	ENSCAFG00000002188	SECISBP2	100	68.366	Canis_familiaris
MGP_PahariEiJ_G0019584	Secisbp2	98	68.042	ENSCAFG00020007224	SECISBP2	98	68.514	Canis_lupus_dingo
MGP_PahariEiJ_G0019584	Secisbp2	100	66.396	ENSCHIG00000010657	SECISBP2	99	66.396	Capra_hircus
MGP_PahariEiJ_G0019584	Secisbp2	88	66.097	ENSTSYG00000014119	SECISBP2	97	66.886	Carlito_syrichta
MGP_PahariEiJ_G0019584	Secisbp2	84	77.128	ENSCAPG00000008522	SECISBP2	99	77.128	Cavia_aperea
MGP_PahariEiJ_G0019584	Secisbp2	100	68.219	ENSCPOG00000014270	SECISBP2	100	69.070	Cavia_porcellus
MGP_PahariEiJ_G0019584	Secisbp2	100	70.780	ENSCCAG00000013350	SECISBP2	100	70.780	Cebus_capucinus
MGP_PahariEiJ_G0019584	Secisbp2	100	70.930	ENSCATG00000008304	SECISBP2	100	70.930	Cercocebus_atys
MGP_PahariEiJ_G0019584	Secisbp2	100	69.651	ENSCLAG00000001166	SECISBP2	96	70.000	Chinchilla_lanigera
MGP_PahariEiJ_G0019584	Secisbp2	100	70.698	ENSCSAG00000007310	SECISBP2	100	70.698	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019584	Secisbp2	85	78.788	ENSCHOG00000011084	SECISBP2	83	78.788	Choloepus_hoffmanni
MGP_PahariEiJ_G0019584	Secisbp2	53	53.462	ENSCPBG00000005608	SECISBP2	99	53.861	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019584	Secisbp2	100	65.465	ENSCANG00000034551	SECISBP2	100	69.912	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019584	Secisbp2	100	83.411	ENSCGRG00001013930	Secisbp2	100	83.411	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019584	Secisbp2	100	83.528	ENSCGRG00000002600	Secisbp2	100	83.528	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019584	Secisbp2	53	48.945	ENSCVAG00000015876	secisbp2	59	49.892	Cyprinodon_variegatus
MGP_PahariEiJ_G0019584	Secisbp2	54	49.383	ENSDARG00000073892	secisbp2	85	49.794	Danio_rerio
MGP_PahariEiJ_G0019584	Secisbp2	100	67.633	ENSDNOG00000009432	SECISBP2	100	68.213	Dasypus_novemcinctus
MGP_PahariEiJ_G0019584	Secisbp2	100	72.209	ENSDORG00000023182	Secisbp2	100	72.209	Dipodomys_ordii
MGP_PahariEiJ_G0019584	Secisbp2	93	75.758	ENSETEG00000001262	SECISBP2	92	75.758	Echinops_telfairi
MGP_PahariEiJ_G0019584	Secisbp2	100	68.182	ENSEASG00005013960	SECISBP2	100	68.182	Equus_asinus_asinus
MGP_PahariEiJ_G0019584	Secisbp2	100	68.182	ENSECAG00000015868	SECISBP2	100	68.182	Equus_caballus
MGP_PahariEiJ_G0019584	Secisbp2	100	59.567	ENSEEUG00000004400	SECISBP2	100	61.047	Erinaceus_europaeus
MGP_PahariEiJ_G0019584	Secisbp2	100	65.268	ENSFCAG00000004214	SECISBP2	100	66.200	Felis_catus
MGP_PahariEiJ_G0019584	Secisbp2	55	53.208	ENSFALG00000012441	SECISBP2	57	53.308	Ficedula_albicollis
MGP_PahariEiJ_G0019584	Secisbp2	100	69.662	ENSFDAG00000021183	SECISBP2	96	70.012	Fukomys_damarensis
MGP_PahariEiJ_G0019584	Secisbp2	53	45.597	ENSFHEG00000004095	secisbp2	64	45.972	Fundulus_heteroclitus
MGP_PahariEiJ_G0019584	Secisbp2	99	41.883	ENSGALG00000010694	SECISBP2	54	52.964	Gallus_gallus
MGP_PahariEiJ_G0019584	Secisbp2	52	46.281	ENSGAFG00000016947	secisbp2	61	46.584	Gambusia_affinis
MGP_PahariEiJ_G0019584	Secisbp2	52	51.193	ENSGACG00000013757	secisbp2	77	50.855	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019584	Secisbp2	100	71.246	ENSGGOG00000000453	SECISBP2	100	71.246	Gorilla_gorilla
MGP_PahariEiJ_G0019584	Secisbp2	100	70.712	ENSHGLG00000014380	SECISBP2	96	71.062	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019584	Secisbp2	100	70.595	ENSHGLG00100006953	SECISBP2	96	70.945	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019584	Secisbp2	53	47.590	ENSIPUG00000015393	secisbp2	62	47.791	Ictalurus_punctatus
MGP_PahariEiJ_G0019584	Secisbp2	100	73.660	ENSSTOG00000000921	SECISBP2	100	73.660	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019584	Secisbp2	100	72.538	ENSJJAG00000020492	Secisbp2	100	72.538	Jaculus_jaculus
MGP_PahariEiJ_G0019584	Secisbp2	52	48.548	ENSKMAG00000007129	secisbp2	62	49.469	Kryptolebias_marmoratus
MGP_PahariEiJ_G0019584	Secisbp2	53	49.109	ENSLBEG00000026023	secisbp2	82	41.176	Labrus_bergylta
MGP_PahariEiJ_G0019584	Secisbp2	51	53.750	ENSLACG00000005735	SECISBP2	87	53.750	Latimeria_chalumnae
MGP_PahariEiJ_G0019584	Secisbp2	53	50.209	ENSLOCG00000011742	secisbp2	80	50.417	Lepisosteus_oculatus
MGP_PahariEiJ_G0019584	Secisbp2	100	64.583	ENSLAFG00000012998	SECISBP2	100	65.046	Loxodonta_africana
MGP_PahariEiJ_G0019584	Secisbp2	100	71.047	ENSMFAG00000003045	SECISBP2	100	71.047	Macaca_fascicularis
MGP_PahariEiJ_G0019584	Secisbp2	100	71.047	ENSMMUG00000012532	SECISBP2	100	71.047	Macaca_mulatta
MGP_PahariEiJ_G0019584	Secisbp2	100	71.047	ENSMNEG00000031737	SECISBP2	100	71.047	Macaca_nemestrina
MGP_PahariEiJ_G0019584	Secisbp2	100	65.698	ENSMLEG00000028868	SECISBP2	100	70.164	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019584	Secisbp2	53	46.380	ENSMAMG00000006644	secisbp2	62	46.850	Mastacembelus_armatus
MGP_PahariEiJ_G0019584	Secisbp2	53	47.379	ENSMZEG00005013614	secisbp2	62	47.984	Maylandia_zebra
MGP_PahariEiJ_G0019584	Secisbp2	100	80.863	ENSMAUG00000008659	Secisbp2	100	80.863	Mesocricetus_auratus
MGP_PahariEiJ_G0019584	Secisbp2	100	71.828	ENSMICG00000001176	SECISBP2	100	72.177	Microcebus_murinus
MGP_PahariEiJ_G0019584	Secisbp2	100	85.397	ENSMOCG00000000616	Secisbp2	100	85.397	Microtus_ochrogaster
MGP_PahariEiJ_G0019584	Secisbp2	100	52.550	ENSMODG00000013365	SECISBP2	100	52.876	Monodelphis_domestica
MGP_PahariEiJ_G0019584	Secisbp2	53	47.410	ENSMALG00000004907	secisbp2	63	47.410	Monopterus_albus
MGP_PahariEiJ_G0019584	Secisbp2	100	93.582	MGP_CAROLIEiJ_G0018518	Secisbp2	100	93.582	Mus_caroli
MGP_PahariEiJ_G0019584	Secisbp2	100	94.406	ENSMUSG00000035139	Secisbp2	100	94.522	Mus_musculus
MGP_PahariEiJ_G0019584	Secisbp2	100	93.859	MGP_SPRETEiJ_G0019399	Secisbp2	100	93.859	Mus_spretus
MGP_PahariEiJ_G0019584	Secisbp2	65	70.197	ENSMPUG00000008495	-	100	70.197	Mustela_putorius_furo
MGP_PahariEiJ_G0019584	Secisbp2	99	65.768	ENSMLUG00000012348	SECISBP2	99	65.885	Myotis_lucifugus
MGP_PahariEiJ_G0019584	Secisbp2	100	77.480	ENSNGAG00000002364	Secisbp2	100	77.480	Nannospalax_galili
MGP_PahariEiJ_G0019584	Secisbp2	53	47.177	ENSNBRG00000022804	secisbp2	62	47.581	Neolamprologus_brichardi
MGP_PahariEiJ_G0019584	Secisbp2	100	66.240	ENSNLEG00000008739	SECISBP2	100	70.759	Nomascus_leucogenys
MGP_PahariEiJ_G0019584	Secisbp2	96	58.575	ENSOPRG00000007588	SECISBP2	99	58.575	Ochotona_princeps
MGP_PahariEiJ_G0019584	Secisbp2	100	70.210	ENSODEG00000000675	SECISBP2	100	70.210	Octodon_degus
MGP_PahariEiJ_G0019584	Secisbp2	53	50.652	ENSONIG00000016931	secisbp2	99	51.500	Oreochromis_niloticus
MGP_PahariEiJ_G0019584	Secisbp2	100	71.279	ENSOCUG00000012932	SECISBP2	100	71.512	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019584	Secisbp2	50	50.873	ENSORLG00000000343	secisbp2	69	50.873	Oryzias_latipes
MGP_PahariEiJ_G0019584	Secisbp2	50	50.437	ENSORLG00020012878	secisbp2	88	41.433	Oryzias_latipes_hni
MGP_PahariEiJ_G0019584	Secisbp2	52	49.142	ENSOMEG00000008595	secisbp2	63	50.753	Oryzias_melastigma
MGP_PahariEiJ_G0019584	Secisbp2	100	68.917	ENSOGAG00000000317	SECISBP2	97	69.150	Otolemur_garnettii
MGP_PahariEiJ_G0019584	Secisbp2	100	66.359	ENSOARG00000007741	SECISBP2	100	66.359	Ovis_aries
MGP_PahariEiJ_G0019584	Secisbp2	100	71.129	ENSPPAG00000012385	SECISBP2	100	71.129	Pan_paniscus
MGP_PahariEiJ_G0019584	Secisbp2	100	65.501	ENSPPRG00000023911	SECISBP2	100	66.200	Panthera_pardus
MGP_PahariEiJ_G0019584	Secisbp2	98	58.893	ENSPTIG00000009781	SECISBP2	99	58.962	Panthera_tigris_altaica
MGP_PahariEiJ_G0019584	Secisbp2	100	71.129	ENSPTRG00000021094	SECISBP2	100	71.129	Pan_troglodytes
MGP_PahariEiJ_G0019584	Secisbp2	100	70.814	ENSPANG00000024873	SECISBP2	100	70.814	Papio_anubis
MGP_PahariEiJ_G0019584	Secisbp2	50	51.802	ENSPKIG00000006499	SECISBP2	51	52.154	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019584	Secisbp2	88	43.269	ENSPSIG00000016257	SECISBP2	96	43.494	Pelodiscus_sinensis
MGP_PahariEiJ_G0019584	Secisbp2	100	86.098	ENSPEMG00000020212	Secisbp2	100	86.098	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019584	Secisbp2	100	53.156	ENSPCIG00000010304	SECISBP2	100	53.097	Phascolarctos_cinereus
MGP_PahariEiJ_G0019584	Secisbp2	52	48.796	ENSPFOG00000008146	secisbp2	74	49.015	Poecilia_formosa
MGP_PahariEiJ_G0019584	Secisbp2	52	45.902	ENSPMEG00000013702	secisbp2	62	45.902	Poecilia_mexicana
MGP_PahariEiJ_G0019584	Secisbp2	52	46.764	ENSPREG00000008117	secisbp2	62	46.973	Poecilia_reticulata
MGP_PahariEiJ_G0019584	Secisbp2	100	70.780	ENSPPYG00000019359	SECISBP2	100	70.780	Pongo_abelii
MGP_PahariEiJ_G0019584	Secisbp2	78	58.519	ENSPCAG00000000559	-	80	58.519	Procavia_capensis
MGP_PahariEiJ_G0019584	Secisbp2	100	71.711	ENSPCOG00000013354	SECISBP2	100	72.061	Propithecus_coquereli
MGP_PahariEiJ_G0019584	Secisbp2	93	69.663	ENSPVAG00000011013	SECISBP2	90	69.663	Pteropus_vampyrus
MGP_PahariEiJ_G0019584	Secisbp2	53	47.379	ENSPNYG00000016799	secisbp2	62	47.984	Pundamilia_nyererei
MGP_PahariEiJ_G0019584	Secisbp2	51	46.247	ENSPNAG00000029922	secisbp2	65	47.667	Pygocentrus_nattereri
MGP_PahariEiJ_G0019584	Secisbp2	100	91.005	ENSRNOG00000013773	Secisbp2	100	91.005	Rattus_norvegicus
MGP_PahariEiJ_G0019584	Secisbp2	100	70.998	ENSRBIG00000044115	SECISBP2	100	70.998	Rhinopithecus_bieti
MGP_PahariEiJ_G0019584	Secisbp2	100	70.998	ENSRROG00000030742	SECISBP2	100	70.998	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019584	Secisbp2	80	78.340	ENSSBOG00000015392	SECISBP2	91	78.340	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019584	Secisbp2	100	55.149	ENSSHAG00000005947	SECISBP2	100	55.086	Sarcophilus_harrisii
MGP_PahariEiJ_G0019584	Secisbp2	53	48.269	ENSSFOG00015010409	secisbp2	61	47.628	Scleropages_formosus
MGP_PahariEiJ_G0019584	Secisbp2	53	46.476	ENSSMAG00000008472	secisbp2	76	48.638	Scophthalmus_maximus
MGP_PahariEiJ_G0019584	Secisbp2	53	47.695	ENSSDUG00000002089	secisbp2	62	48.434	Seriola_dumerili
MGP_PahariEiJ_G0019584	Secisbp2	53	48.297	ENSSLDG00000003510	secisbp2	62	48.697	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0019584	Secisbp2	74	97.260	ENSSARG00000012518	-	75	97.260	Sorex_araneus
MGP_PahariEiJ_G0019584	Secisbp2	88	42.288	ENSSPUG00000009635	SECISBP2	99	42.506	Sphenodon_punctatus
MGP_PahariEiJ_G0019584	Secisbp2	100	67.972	ENSSSCG00000028033	SECISBP2	100	68.088	Sus_scrofa
MGP_PahariEiJ_G0019584	Secisbp2	54	58.159	ENSTGUG00000000440	SECISBP2	87	58.159	Taeniopygia_guttata
MGP_PahariEiJ_G0019584	Secisbp2	52	46.341	ENSTRUG00000016835	secisbp2	67	46.341	Takifugu_rubripes
MGP_PahariEiJ_G0019584	Secisbp2	54	49.474	ENSTNIG00000015576	secisbp2	96	50.535	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019584	Secisbp2	75	84.091	ENSTBEG00000000288	SECISBP2	77	84.091	Tupaia_belangeri
MGP_PahariEiJ_G0019584	Secisbp2	100	66.047	ENSTTRG00000003339	SECISBP2	98	66.512	Tursiops_truncatus
MGP_PahariEiJ_G0019584	Secisbp2	100	66.318	ENSUAMG00000016243	SECISBP2	100	66.318	Ursus_americanus
MGP_PahariEiJ_G0019584	Secisbp2	98	64.852	ENSUMAG00000016261	SECISBP2	99	65.248	Ursus_maritimus
MGP_PahariEiJ_G0019584	Secisbp2	88	75.904	ENSVVUG00000022278	SECISBP2	99	66.078	Vulpes_vulpes
MGP_PahariEiJ_G0019584	Secisbp2	54	52.459	ENSXETG00000029955	SECISBP2	86	52.138	Xenopus_tropicalis
MGP_PahariEiJ_G0019584	Secisbp2	52	46.973	ENSXMAG00000003090	secisbp2	61	47.182	Xiphophorus_maculatus