EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019603 (Gene tree)
Gene ID: 110333986
Gene Symbol: Nop16
Alias: D13Wsu177e
Full Name: nucleolar protein 16
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 4817 bases
Position: chr16:57336346-57341162
Accession: 110329106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0041018	Nop16	PF09420.10	4.2e-23	1	2
MGP_PahariEiJ_P0041018	Nop16	PF09420.10	4.2e-23	2	2
MGP_PahariEiJ_P0041019	Nop16	PF09420.10	4.8e-23	1	2
MGP_PahariEiJ_P0041019	Nop16	PF09420.10	4.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0041020	-	588	-	MGP_PahariEiJ_P0041020	35 (aa)	-	-
MGP_PahariEiJ_T0041019	-	790	-	MGP_PahariEiJ_P0041019	184 (aa)	-	-
MGP_PahariEiJ_T0041018	-	1754	-	MGP_PahariEiJ_P0041018	178 (aa)	XP_021064334	UPI000A312E10

Gene Model

Click here to download MGP_PahariEiJ_G0019603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019603	Nop16	96	52.353	ENSAPOG00000010682	-	96	52.353	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSAMEG00000006988	-	100	93.258	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019603	Nop16	96	54.706	ENSACIG00000019263	nop16	95	54.706	Amphilophus_citrinellus
MGP_PahariEiJ_G0019603	Nop16	98	52.000	ENSAOCG00000005504	nop16	96	52.941	Amphiprion_ocellaris
MGP_PahariEiJ_G0019603	Nop16	98	52.000	ENSAPEG00000006605	nop16	96	52.941	Amphiprion_percula
MGP_PahariEiJ_G0019603	Nop16	96	55.882	ENSATEG00000014089	nop16	95	55.882	Anabas_testudineus
MGP_PahariEiJ_G0019603	Nop16	99	71.023	ENSACAG00000006333	-	99	71.023	Anolis_carolinensis
MGP_PahariEiJ_G0019603	Nop16	100	87.640	ENSANAG00000015743	-	100	87.640	Aotus_nancymaae
MGP_PahariEiJ_G0019603	Nop16	100	83.146	ENSANAG00000027410	-	100	83.146	Aotus_nancymaae
MGP_PahariEiJ_G0019603	Nop16	96	55.882	ENSACLG00000025227	nop16	95	55.882	Astatotilapia_calliptera
MGP_PahariEiJ_G0019603	Nop16	94	45.509	ENSAMXG00000006843	nop16	95	45.509	Astyanax_mexicanus
MGP_PahariEiJ_G0019603	Nop16	100	92.135	ENSBTAG00000010734	NOP16	100	92.135	Bos_taurus
MGP_PahariEiJ_G0019603	Nop16	100	91.573	ENSCAFG00000016694	NOP16	100	91.573	Canis_familiaris
MGP_PahariEiJ_G0019603	Nop16	99	92.045	ENSCAFG00020011505	-	98	90.217	Canis_lupus_dingo
MGP_PahariEiJ_G0019603	Nop16	100	92.135	ENSCHIG00000022082	-	100	92.135	Capra_hircus
MGP_PahariEiJ_G0019603	Nop16	99	91.525	ENSTSYG00000030409	-	99	91.525	Carlito_syrichta
MGP_PahariEiJ_G0019603	Nop16	100	73.596	ENSTSYG00000032690	-	100	73.596	Carlito_syrichta
MGP_PahariEiJ_G0019603	Nop16	100	90.449	ENSCPOG00000026072	-	100	90.449	Cavia_porcellus
MGP_PahariEiJ_G0019603	Nop16	96	83.626	ENSCCAG00000026775	-	99	83.626	Cebus_capucinus
MGP_PahariEiJ_G0019603	Nop16	100	90.449	ENSCLAG00000015405	-	100	90.449	Chinchilla_lanigera
MGP_PahariEiJ_G0019603	Nop16	100	91.573	ENSCSAG00000009400	-	100	91.573	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019603	Nop16	99	74.719	ENSCPBG00000022647	-	99	74.719	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019603	Nop16	100	43.956	ENSCING00000006179	-	98	43.956	Ciona_intestinalis
MGP_PahariEiJ_G0019603	Nop16	96	41.279	ENSCSAVG00000000269	-	94	41.279	Ciona_savignyi
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSCGRG00001004259	Nop16	100	93.258	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSCGRG00000010975	Nop16	100	93.258	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019603	Nop16	96	51.765	ENSCSEG00000020523	nop16	97	51.765	Cynoglossus_semilaevis
MGP_PahariEiJ_G0019603	Nop16	96	53.529	ENSCVAG00000020140	nop16	95	53.529	Cyprinodon_variegatus
MGP_PahariEiJ_G0019603	Nop16	98	49.718	ENSDARG00000044402	nop16	99	49.718	Danio_rerio
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSDNOG00000042890	-	100	91.011	Dasypus_novemcinctus
MGP_PahariEiJ_G0019603	Nop16	100	89.888	ENSDORG00000008872	Nop16	100	89.888	Dipodomys_ordii
MGP_PahariEiJ_G0019603	Nop16	93	44.186	ENSEBUG00000011196	nop16	95	44.186	Eptatretus_burgeri
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSEASG00005011988	-	100	93.258	Equus_asinus_asinus
MGP_PahariEiJ_G0019603	Nop16	100	93.820	ENSECAG00000021354	NOP16	100	93.820	Equus_caballus
MGP_PahariEiJ_G0019603	Nop16	98	55.429	ENSELUG00000000401	nop16	98	55.429	Esox_lucius
MGP_PahariEiJ_G0019603	Nop16	100	92.697	ENSFCAG00000025473	-	100	92.697	Felis_catus
MGP_PahariEiJ_G0019603	Nop16	99	67.598	ENSFALG00000008553	-	99	67.598	Ficedula_albicollis
MGP_PahariEiJ_G0019603	Nop16	100	89.888	ENSFDAG00000000193	-	100	89.888	Fukomys_damarensis
MGP_PahariEiJ_G0019603	Nop16	96	55.294	ENSFHEG00000016452	nop16	95	55.294	Fundulus_heteroclitus
MGP_PahariEiJ_G0019603	Nop16	99	72.626	ENSGALG00000003355	-	99	72.626	Gallus_gallus
MGP_PahariEiJ_G0019603	Nop16	83	54.422	ENSGAFG00000011616	nop16	79	54.422	Gambusia_affinis
MGP_PahariEiJ_G0019603	Nop16	96	52.326	ENSGACG00000003122	-	97	55.652	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019603	Nop16	96	53.529	ENSGACG00000002618	-	98	53.529	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019603	Nop16	96	52.941	ENSGACG00000020819	-	98	52.941	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019603	Nop16	96	49.412	ENSGACG00000020810	nop16	100	49.412	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019603	Nop16	96	55.294	ENSHBUG00000013527	nop16	95	55.294	Haplochromis_burtoni
MGP_PahariEiJ_G0019603	Nop16	100	91.573	ENSHGLG00000013437	NOP16	100	91.573	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019603	Nop16	100	91.573	ENSHGLG00100011375	NOP16	100	91.573	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019603	Nop16	96	51.744	ENSHCOG00000019999	nop16	97	51.744	Hippocampus_comes
MGP_PahariEiJ_G0019603	Nop16	94	49.405	ENSIPUG00000006682	nop16	95	49.405	Ictalurus_punctatus
MGP_PahariEiJ_G0019603	Nop16	100	91.111	ENSSTOG00000004869	-	100	91.111	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSJJAG00000017655	Nop16	100	93.258	Jaculus_jaculus
MGP_PahariEiJ_G0019603	Nop16	96	55.294	ENSKMAG00000006164	nop16	95	55.294	Kryptolebias_marmoratus
MGP_PahariEiJ_G0019603	Nop16	96	54.118	ENSLBEG00000018355	nop16	78	54.118	Labrus_bergylta
MGP_PahariEiJ_G0019603	Nop16	99	63.842	ENSLACG00000014884	nop16	100	63.842	Latimeria_chalumnae
MGP_PahariEiJ_G0019603	Nop16	99	55.932	ENSLOCG00000012348	nop16	100	55.556	Lepisosteus_oculatus
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSLAFG00000017886	-	100	91.011	Loxodonta_africana
MGP_PahariEiJ_G0019603	Nop16	96	57.059	ENSMAMG00000021868	nop16	95	57.059	Mastacembelus_armatus
MGP_PahariEiJ_G0019603	Nop16	96	55.882	ENSMZEG00005012112	nop16	95	55.882	Maylandia_zebra
MGP_PahariEiJ_G0019603	Nop16	57	69.307	ENSMGAG00000004726	-	99	69.307	Meleagris_gallopavo
MGP_PahariEiJ_G0019603	Nop16	94	85.119	ENSMAUG00000015569	-	99	85.119	Mesocricetus_auratus
MGP_PahariEiJ_G0019603	Nop16	60	92.453	ENSMAUG00000009852	-	100	92.453	Mesocricetus_auratus
MGP_PahariEiJ_G0019603	Nop16	100	94.944	ENSMOCG00000020788	Nop16	100	94.944	Microtus_ochrogaster
MGP_PahariEiJ_G0019603	Nop16	96	54.118	ENSMMOG00000016054	nop16	99	54.118	Mola_mola
MGP_PahariEiJ_G0019603	Nop16	100	79.444	ENSMODG00000005214	-	100	79.444	Monodelphis_domestica
MGP_PahariEiJ_G0019603	Nop16	96	52.632	ENSMALG00000021263	nop16	95	52.632	Monopterus_albus
MGP_PahariEiJ_G0019603	Nop16	100	96.629	MGP_CAROLIEiJ_G0018538	Nop16	100	96.629	Mus_caroli
MGP_PahariEiJ_G0019603	Nop16	100	97.191	ENSMUSG00000025869	Nop16	100	97.191	Mus_musculus
MGP_PahariEiJ_G0019603	Nop16	100	96.629	MGP_SPRETEiJ_G0019418	Nop16	100	96.629	Mus_spretus
MGP_PahariEiJ_G0019603	Nop16	100	93.820	ENSMPUG00000012552	-	100	93.820	Mustela_putorius_furo
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSMPUG00000016964	-	100	91.011	Mustela_putorius_furo
MGP_PahariEiJ_G0019603	Nop16	99	90.960	ENSMLUG00000003504	-	99	90.960	Myotis_lucifugus
MGP_PahariEiJ_G0019603	Nop16	100	93.258	ENSNGAG00000018045	Nop16	100	93.258	Nannospalax_galili
MGP_PahariEiJ_G0019603	Nop16	96	54.706	ENSNBRG00000015181	nop16	96	54.706	Neolamprologus_brichardi
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSODEG00000009586	-	100	91.011	Octodon_degus
MGP_PahariEiJ_G0019603	Nop16	96	57.647	ENSONIG00000016417	nop16	95	57.647	Oreochromis_niloticus
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSOCUG00000013171	-	100	91.011	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019603	Nop16	96	55.294	ENSORLG00000026611	nop16	95	55.814	Oryzias_latipes
MGP_PahariEiJ_G0019603	Nop16	96	58.824	ENSOMEG00000023001	nop16	95	58.824	Oryzias_melastigma
MGP_PahariEiJ_G0019603	Nop16	100	92.697	ENSOGAG00000000824	-	100	92.697	Otolemur_garnettii
MGP_PahariEiJ_G0019603	Nop16	100	92.135	ENSOARG00000002165	-	100	92.135	Ovis_aries
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSPPAG00000035473	-	100	91.011	Pan_paniscus
MGP_PahariEiJ_G0019603	Nop16	100	92.697	ENSPPRG00000016600	-	100	92.697	Panthera_pardus
MGP_PahariEiJ_G0019603	Nop16	100	92.135	ENSPTIG00000011708	-	100	92.135	Panthera_tigris_altaica
MGP_PahariEiJ_G0019603	Nop16	100	91.011	ENSPTRG00000017560	NOP16	100	91.011	Pan_troglodytes
MGP_PahariEiJ_G0019603	Nop16	99	53.672	ENSPKIG00000009587	nop16	99	53.977	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019603	Nop16	79	66.901	ENSPSIG00000013546	-	99	66.901	Pelodiscus_sinensis
MGP_PahariEiJ_G0019603	Nop16	94	55.030	ENSPMGG00000003443	nop16	98	55.030	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0019603	Nop16	100	94.944	ENSPEMG00000020268	Nop16	100	94.944	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019603	Nop16	100	82.778	ENSPCIG00000009782	-	100	82.778	Phascolarctos_cinereus
MGP_PahariEiJ_G0019603	Nop16	96	52.941	ENSPFOG00000010549	nop16	95	52.941	Poecilia_formosa
MGP_PahariEiJ_G0019603	Nop16	77	52.555	ENSPLAG00000007124	nop16	70	52.555	Poecilia_latipinna
MGP_PahariEiJ_G0019603	Nop16	96	52.941	ENSPMEG00000008611	nop16	95	52.941	Poecilia_mexicana
MGP_PahariEiJ_G0019603	Nop16	96	52.941	ENSPREG00000012940	nop16	95	52.941	Poecilia_reticulata
MGP_PahariEiJ_G0019603	Nop16	99	92.090	ENSPPYG00000016070	-	99	92.090	Pongo_abelii
MGP_PahariEiJ_G0019603	Nop16	96	55.882	ENSPNYG00000013529	nop16	95	55.882	Pundamilia_nyererei
MGP_PahariEiJ_G0019603	Nop16	93	48.521	ENSPNAG00000016233	nop16	95	48.521	Pygocentrus_nattereri
MGP_PahariEiJ_G0019603	Nop16	100	96.067	ENSRNOG00000017284	Nop16	100	96.067	Rattus_norvegicus
MGP_PahariEiJ_G0019603	Nop16	100	80.447	ENSSHAG00000001724	-	100	80.447	Sarcophilus_harrisii
MGP_PahariEiJ_G0019603	Nop16	90	53.125	ENSSFOG00015010537	nop16	77	52.326	Scleropages_formosus
MGP_PahariEiJ_G0019603	Nop16	96	54.706	ENSSDUG00000022349	nop16	95	54.706	Seriola_dumerili
MGP_PahariEiJ_G0019603	Nop16	96	55.294	ENSSLDG00000025171	nop16	95	55.294	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0019603	Nop16	73	78.462	ENSSARG00000006699	-	61	78.462	Sorex_araneus
MGP_PahariEiJ_G0019603	Nop16	99	71.023	ENSSPUG00000006508	-	98	71.023	Sphenodon_punctatus
MGP_PahariEiJ_G0019603	Nop16	96	54.706	ENSSPAG00000011772	nop16	95	54.706	Stegastes_partitus
MGP_PahariEiJ_G0019603	Nop16	100	92.135	ENSSSCG00000029577	-	100	92.135	Sus_scrofa
MGP_PahariEiJ_G0019603	Nop16	99	70.950	ENSTGUG00000000543	-	99	70.950	Taeniopygia_guttata
MGP_PahariEiJ_G0019603	Nop16	96	53.801	ENSTRUG00000020255	nop16	95	53.801	Takifugu_rubripes
MGP_PahariEiJ_G0019603	Nop16	96	54.971	ENSTNIG00000007616	nop16	95	54.971	Tetraodon_nigroviridis
MGP_PahariEiJ_G0019603	Nop16	100	92.697	ENSUAMG00000005139	-	100	92.697	Ursus_americanus
MGP_PahariEiJ_G0019603	Nop16	99	92.614	ENSVVUG00000001697	-	98	90.761	Vulpes_vulpes
MGP_PahariEiJ_G0019603	Nop16	92	57.669	ENSXETG00000022342	nop16	95	57.669	Xenopus_tropicalis
MGP_PahariEiJ_G0019603	Nop16	96	54.386	ENSXCOG00000018829	nop16	97	54.386	Xiphophorus_couchianus
MGP_PahariEiJ_G0019603	Nop16	96	54.971	ENSXMAG00000029113	nop16	95	54.971	Xiphophorus_maculatus