EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019657 (Gene tree)
Gene ID: 110333726
Gene Symbol: Hnrnpa0
Alias: 1110055B05Rik|3010025E17Rik|Hnrpa0
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 2659 bases
Position: chr16:60808002-60810660
Accession: 110333726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0041207	RRM_1	PF00076.22	3.9e-31	1	2
MGP_PahariEiJ_P0041207	RRM_1	PF00076.22	3.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0041207	-	2659	XM_021215403	MGP_PahariEiJ_P0041207	305 (aa)	XP_021071062	UPI000A3072AD

Gene Model

Click here to download MGP_PahariEiJ_G0019657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0019657	Hnrnpa0	57	30.469	MGP_PahariEiJ_G0029153	Tardbp	93	31.858
MGP_PahariEiJ_G0019657	Hnrnpa0	50	33.113	MGP_PahariEiJ_G0028765	Pabpc4	52	32.278
MGP_PahariEiJ_G0019657	Hnrnpa0	71	34.118	MGP_PahariEiJ_G0030987	Dazap1	99	34.615
MGP_PahariEiJ_G0019657	Hnrnpa0	56	43.421	MGP_PahariEiJ_G0030981	Cirbp	94	38.614
MGP_PahariEiJ_G0019657	Hnrnpa0	54	35.065	MGP_PahariEiJ_G0031641	Rbmx	82	33.333
MGP_PahariEiJ_G0019657	Hnrnpa0	58	51.685	MGP_PahariEiJ_G0020372	-	64	51.685
MGP_PahariEiJ_G0019657	Hnrnpa0	91	49.097	MGP_PahariEiJ_G0022127	Hnrnpa2b1	60	55.307
MGP_PahariEiJ_G0019657	Hnrnpa0	82	32.645	MGP_PahariEiJ_G0017446	Hnrnpab	57	35.882
MGP_PahariEiJ_G0019657	Hnrnpa0	59	43.646	MGP_PahariEiJ_G0024206	Msi1	58	42.949
MGP_PahariEiJ_G0019657	Hnrnpa0	59	41.989	MGP_PahariEiJ_G0018079	Msi2	99	41.228
MGP_PahariEiJ_G0019657	Hnrnpa0	72	35.909	MGP_PahariEiJ_G0017224	Hnrnpd	100	37.838
MGP_PahariEiJ_G0019657	Hnrnpa0	56	34.706	MGP_PahariEiJ_G0017226	Hnrnpdl	51	34.706
MGP_PahariEiJ_G0019657	Hnrnpa0	50	31.613	MGP_PahariEiJ_G0026071	Pabpc1l	56	30.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSG00000177733	HNRNPA0	88	88.930	Homo_sapiens
MGP_PahariEiJ_G0019657	Hnrnpa0	59	62.011	ENSAPOG00000003364	HNRNPA0	58	63.068	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019657	Hnrnpa0	67	52.941	ENSAPOG00000003688	hnrnpa3	50	56.742	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019657	Hnrnpa0	59	56.667	ENSAPOG00000014678	-	52	56.742	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019657	Hnrnpa0	76	47.222	ENSAPOG00000003641	hnrnpa3	80	51.389	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019657	Hnrnpa0	67	65.366	ENSAPOG00000003387	HNRNPA0	62	69.663	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0019657	Hnrnpa0	92	47.390	ENSAMEG00000004293	-	66	57.554	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019657	Hnrnpa0	70	92.488	ENSAMEG00000016316	HNRNPA0	68	91.549	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019657	Hnrnpa0	61	68.280	ENSACIG00000021834	HNRNPA0	78	70.056	Amphilophus_citrinellus
MGP_PahariEiJ_G0019657	Hnrnpa0	58	63.068	ENSATEG00000003526	-	93	63.068	Anabas_testudineus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	84.133	ENSANAG00000017086	HNRNPA0	87	88.930	Aotus_nancymaae
MGP_PahariEiJ_G0019657	Hnrnpa0	95	50.512	ENSACLG00000008973	HNRNPA0	55	59.659	Astatotilapia_calliptera
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.561	ENSBTAG00000016929	HNRNPA0	86	87.823	Bos_taurus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	87.085	ENSCJAG00000006112	HNRNPA0	95	87.329	Callithrix_jacchus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.043	ENSCAFG00000001132	HNRNPA0	88	87.319	Canis_familiaris
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.043	ENSCAFG00020008142	HNRNPA0	88	87.319	Canis_lupus_dingo
MGP_PahariEiJ_G0019657	Hnrnpa0	89	86.347	ENSCHIG00000002602	HNRNPA0	88	88.930	Capra_hircus
MGP_PahariEiJ_G0019657	Hnrnpa0	58	56.742	ENSCAPG00000003643	-	53	46.186	Cavia_aperea
MGP_PahariEiJ_G0019657	Hnrnpa0	89	85.609	ENSCPOG00000026092	HNRNPA0	89	90.037	Cavia_porcellus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	85.609	ENSCCAG00000010302	HNRNPA0	94	88.699	Cebus_capucinus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.299	ENSCATG00000021167	HNRNPA0	94	89.041	Cercocebus_atys
MGP_PahariEiJ_G0019657	Hnrnpa0	59	51.934	ENSCATG00000038569	-	60	45.794	Cercocebus_atys
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSCSAG00000000499	HNRNPA0	89	88.930	Chlorocebus_sabaeus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	78.545	ENSCPBG00000008738	HNRNPA0	89	81.455	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSCANG00000038062	HNRNPA0	87	88.930	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0019657	Hnrnpa0	96	89.726	ENSCGRG00001005548	Hnrnpa0	95	92.466	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019657	Hnrnpa0	67	44.608	ENSCGRG00001010070	-	57	46.927	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019657	Hnrnpa0	67	44.608	ENSCGRG00000007592	-	56	46.927	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019657	Hnrnpa0	70	51.887	ENSCGRG00000003686	-	63	56.983	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019657	Hnrnpa0	60	55.191	ENSDARG00000059351	hnrnpa3	74	56.425	Danio_rerio
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.416	ENSDNOG00000030903	HNRNPA0	87	85.401	Dasypus_novemcinctus
MGP_PahariEiJ_G0019657	Hnrnpa0	59	58.011	ENSDNOG00000031964	-	60	58.659	Dasypus_novemcinctus
MGP_PahariEiJ_G0019657	Hnrnpa0	60	51.087	ENSDORG00000023528	-	59	43.612	Dipodomys_ordii
MGP_PahariEiJ_G0019657	Hnrnpa0	59	47.514	ENSETEG00000007747	-	62	48.045	Echinops_telfairi
MGP_PahariEiJ_G0019657	Hnrnpa0	70	50.698	ENSEBUG00000016570	HNRNPA0	53	53.933	Eptatretus_burgeri
MGP_PahariEiJ_G0019657	Hnrnpa0	58	56.604	ENSEBUG00000009297	HNRNPA0	88	48.387	Eptatretus_burgeri
MGP_PahariEiJ_G0019657	Hnrnpa0	57	51.724	ENSEBUG00000007989	-	60	42.012	Eptatretus_burgeri
MGP_PahariEiJ_G0019657	Hnrnpa0	89	85.609	ENSECAG00000032164	HNRNPA0	95	89.041	Equus_caballus
MGP_PahariEiJ_G0019657	Hnrnpa0	96	47.619	ENSELUG00000023080	hnrnpa3	62	56.425	Esox_lucius
MGP_PahariEiJ_G0019657	Hnrnpa0	89	90.074	ENSFCAG00000040261	HNRNPA0	88	86.397	Felis_catus
MGP_PahariEiJ_G0019657	Hnrnpa0	100	82.581	ENSFALG00000014395	HNRNPA0	81	81.455	Ficedula_albicollis
MGP_PahariEiJ_G0019657	Hnrnpa0	59	46.961	ENSFDAG00000014067	-	52	47.486	Fukomys_damarensis
MGP_PahariEiJ_G0019657	Hnrnpa0	74	37.611	ENSFDAG00000018739	-	63	44.693	Fukomys_damarensis
MGP_PahariEiJ_G0019657	Hnrnpa0	89	98.895	ENSFDAG00000019780	HNRNPA0	75	98.889	Fukomys_damarensis
MGP_PahariEiJ_G0019657	Hnrnpa0	64	70.440	ENSFHEG00000008384	HNRNPA0	80	70.440	Fundulus_heteroclitus
MGP_PahariEiJ_G0019657	Hnrnpa0	57	64.000	ENSFHEG00000008390	HNRNPA0	51	64.000	Fundulus_heteroclitus
MGP_PahariEiJ_G0019657	Hnrnpa0	60	65.027	ENSGMOG00000016232	HNRNPA0	63	65.922	Gadus_morhua
MGP_PahariEiJ_G0019657	Hnrnpa0	100	82.143	ENSGALG00000006160	HNRNPA0	89	82.051	Gallus_gallus
MGP_PahariEiJ_G0019657	Hnrnpa0	98	50.000	ENSGACG00000004477	hnrnpa3	59	57.303	Gasterosteus_aculeatus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	78.909	ENSGAGG00000005632	HNRNPA0	89	81.818	Gopherus_agassizii
MGP_PahariEiJ_G0019657	Hnrnpa0	59	68.508	ENSHBUG00000023868	HNRNPA0	69	69.101	Haplochromis_burtoni
MGP_PahariEiJ_G0019657	Hnrnpa0	59	54.696	ENSHGLG00000014577	-	66	55.307	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.299	ENSHGLG00000018216	HNRNPA0	89	87.823	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019657	Hnrnpa0	60	56.831	ENSHGLG00100001336	-	62	48.636	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019657	Hnrnpa0	57	67.429	ENSHCOG00000007174	HNRNPA0	96	67.045	Hippocampus_comes
MGP_PahariEiJ_G0019657	Hnrnpa0	59	56.667	ENSIPUG00000019815	RO32	53	56.425	Ictalurus_punctatus
MGP_PahariEiJ_G0019657	Hnrnpa0	96	87.329	ENSJJAG00000006954	Hnrnpa0	95	85.616	Jaculus_jaculus
MGP_PahariEiJ_G0019657	Hnrnpa0	98	65.705	ENSLACG00000014480	HNRNPA0	59	80.556	Latimeria_chalumnae
MGP_PahariEiJ_G0019657	Hnrnpa0	60	55.738	ENSLOCG00000006986	hnrnpa3	51	56.425	Lepisosteus_oculatus
MGP_PahariEiJ_G0019657	Hnrnpa0	68	62.581	ENSLAFG00000027712	-	54	63.399	Loxodonta_africana
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSMFAG00000030522	HNRNPA0	87	88.930	Macaca_fascicularis
MGP_PahariEiJ_G0019657	Hnrnpa0	59	51.366	ENSMMUG00000031232	-	60	45.370	Macaca_mulatta
MGP_PahariEiJ_G0019657	Hnrnpa0	96	51.955	ENSMNEG00000038943	-	68	51.955	Macaca_nemestrina
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSMNEG00000015863	HNRNPA0	87	88.930	Macaca_nemestrina
MGP_PahariEiJ_G0019657	Hnrnpa0	76	41.732	ENSMLEG00000033415	-	55	42.128	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.299	ENSMLEG00000026629	HNRNPA0	87	88.561	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019657	Hnrnpa0	67	65.534	ENSMAMG00000017754	HNRNPA0	69	69.886	Mastacembelus_armatus
MGP_PahariEiJ_G0019657	Hnrnpa0	95	50.512	ENSMZEG00005001055	HNRNPA0	55	59.659	Maylandia_zebra
MGP_PahariEiJ_G0019657	Hnrnpa0	59	100.000	ENSMAUG00000018485	Hnrnpa0	60	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0019657	Hnrnpa0	65	75.281	ENSMODG00000002463	-	95	75.281	Monodelphis_domestica
MGP_PahariEiJ_G0019657	Hnrnpa0	65	98.378	ENSMODG00000014720	HNRNPA0	71	98.378	Monodelphis_domestica
MGP_PahariEiJ_G0019657	Hnrnpa0	95	48.621	ENSMALG00000009691	hnrnpa3	75	56.180	Monopterus_albus
MGP_PahariEiJ_G0019657	Hnrnpa0	100	99.023	MGP_CAROLIEiJ_G0018593	Hnrnpa0	100	99.023	Mus_caroli
MGP_PahariEiJ_G0019657	Hnrnpa0	100	98.052	ENSMUSG00000007836	Hnrnpa0	100	98.052	Mus_musculus
MGP_PahariEiJ_G0019657	Hnrnpa0	100	96.774	MGP_SPRETEiJ_G0019473	Hnrnpa0	95	90.541	Mus_spretus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.686	ENSMPUG00000019790	HNRNPA0	88	84.307	Mustela_putorius_furo
MGP_PahariEiJ_G0019657	Hnrnpa0	89	85.609	ENSMLUG00000012683	-	87	88.561	Myotis_lucifugus
MGP_PahariEiJ_G0019657	Hnrnpa0	59	96.111	ENSMLUG00000028644	-	56	94.652	Myotis_lucifugus
MGP_PahariEiJ_G0019657	Hnrnpa0	100	92.182	ENSNGAG00000008883	Hnrnpa0	89	89.299	Nannospalax_galili
MGP_PahariEiJ_G0019657	Hnrnpa0	96	85.714	ENSNLEG00000008518	HNRNPA0	95	86.486	Nomascus_leucogenys
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.561	ENSMEUG00000013675	HNRNPA0	87	88.192	Notamacropus_eugenii
MGP_PahariEiJ_G0019657	Hnrnpa0	89	90.406	ENSODEG00000019566	HNRNPA0	89	89.668	Octodon_degus
MGP_PahariEiJ_G0019657	Hnrnpa0	68	59.669	ENSODEG00000016578	-	57	60.335	Octodon_degus
MGP_PahariEiJ_G0019657	Hnrnpa0	93	44.755	ENSORLG00000025015	-	57	58.192	Oryzias_latipes
MGP_PahariEiJ_G0019657	Hnrnpa0	93	44.755	ENSORLG00000025332	-	57	58.192	Oryzias_latipes
MGP_PahariEiJ_G0019657	Hnrnpa0	59	60.000	ENSORLG00000027074	-	79	60.795	Oryzias_latipes
MGP_PahariEiJ_G0019657	Hnrnpa0	90	47.445	ENSORLG00020022487	-	62	58.523	Oryzias_latipes_hni
MGP_PahariEiJ_G0019657	Hnrnpa0	96	47.588	ENSORLG00020008203	-	59	60.894	Oryzias_latipes_hni
MGP_PahariEiJ_G0019657	Hnrnpa0	94	47.097	ENSORLG00020007505	-	58	62.069	Oryzias_latipes_hni
MGP_PahariEiJ_G0019657	Hnrnpa0	61	61.272	ENSORLG00020007109	-	63	56.614	Oryzias_latipes_hni
MGP_PahariEiJ_G0019657	Hnrnpa0	59	63.687	ENSORLG00015016302	HNRNPA0	57	64.407	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019657	Hnrnpa0	95	49.505	ENSORLG00015017144	-	58	61.714	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019657	Hnrnpa0	95	46.959	ENSORLG00015015185	-	60	61.628	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019657	Hnrnpa0	64	58.247	ENSORLG00015015182	-	77	61.582	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019657	Hnrnpa0	97	41.720	ENSORLG00015016236	HNRNPA0	59	53.947	Oryzias_latipes_hsok
MGP_PahariEiJ_G0019657	Hnrnpa0	91	86.239	ENSOGAG00000025754	HNRNPA0	76	98.889	Otolemur_garnettii
MGP_PahariEiJ_G0019657	Hnrnpa0	89	84.926	ENSOARG00000015434	HNRNPA0	90	89.668	Ovis_aries
MGP_PahariEiJ_G0019657	Hnrnpa0	96	86.054	ENSPPAG00000005303	HNRNPA0	95	86.824	Pan_paniscus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	90.037	ENSPPRG00000014655	HNRNPA0	88	89.299	Panthera_pardus
MGP_PahariEiJ_G0019657	Hnrnpa0	96	86.054	ENSPTRG00000017273	HNRNPA0	95	86.824	Pan_troglodytes
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.299	ENSPANG00000012900	HNRNPA0	87	88.561	Papio_anubis
MGP_PahariEiJ_G0019657	Hnrnpa0	60	72.527	ENSPKIG00000020270	HNRNPA0	63	72.778	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019657	Hnrnpa0	75	49.749	ENSPKIG00000022916	hnrnpa3	64	56.425	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019657	Hnrnpa0	59	72.222	ENSPKIG00000020281	-	53	72.472	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0019657	Hnrnpa0	93	45.048	ENSPMGG00000000747	hnrnpa3	72	56.209	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	79.336	ENSPEMG00000020274	Hnrnpa0	86	77.491	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019657	Hnrnpa0	73	50.673	ENSPMAG00000004449	-	76	55.307	Petromyzon_marinus
MGP_PahariEiJ_G0019657	Hnrnpa0	64	69.591	ENSPMEG00000017025	HNRNPA0	98	69.591	Poecilia_mexicana
MGP_PahariEiJ_G0019657	Hnrnpa0	64	69.811	ENSPREG00000010619	HNRNPA0	76	69.375	Poecilia_reticulata
MGP_PahariEiJ_G0019657	Hnrnpa0	82	49.801	ENSPREG00000005411	hnrnpa3	59	55.307	Poecilia_reticulata
MGP_PahariEiJ_G0019657	Hnrnpa0	89	49.339	ENSPPYG00000012967	-	71	61.875	Pongo_abelii
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSPPYG00000015814	HNRNPA0	88	88.930	Pongo_abelii
MGP_PahariEiJ_G0019657	Hnrnpa0	59	58.564	ENSPPYG00000001012	-	58	59.218	Pongo_abelii
MGP_PahariEiJ_G0019657	Hnrnpa0	75	45.701	ENSPNYG00000008424	hnrnpa3	74	57.143	Pundamilia_nyererei
MGP_PahariEiJ_G0019657	Hnrnpa0	60	69.231	ENSPNAG00000023333	HNRNPA0	61	70.000	Pygocentrus_nattereri
MGP_PahariEiJ_G0019657	Hnrnpa0	89	91.606	ENSRNOG00000039876	LOC681410	89	96.350	Rattus_norvegicus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSRBIG00000023673	HNRNPA0	88	88.930	Rhinopithecus_bieti
MGP_PahariEiJ_G0019657	Hnrnpa0	89	89.668	ENSRROG00000002558	HNRNPA0	88	88.930	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019657	Hnrnpa0	58	56.442	ENSRROG00000034643	-	89	48.110	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019657	Hnrnpa0	59	72.222	ENSSFOG00015002650	HNRNPA0	56	72.222	Scleropages_formosus
MGP_PahariEiJ_G0019657	Hnrnpa0	67	53.922	ENSSFOG00015001814	hnrnpa3	50	57.542	Scleropages_formosus
MGP_PahariEiJ_G0019657	Hnrnpa0	67	53.431	ENSSDUG00000000381	hnrnpa3	57	57.303	Seriola_dumerili
MGP_PahariEiJ_G0019657	Hnrnpa0	100	79.612	ENSSPUG00000016613	HNRNPA0	89	81.022	Sphenodon_punctatus
MGP_PahariEiJ_G0019657	Hnrnpa0	100	78.710	ENSTGUG00000001186	HNRNPA0	100	77.742	Taeniopygia_guttata
MGP_PahariEiJ_G0019657	Hnrnpa0	59	59.777	ENSTRUG00000021494	-	59	60.227	Takifugu_rubripes
MGP_PahariEiJ_G0019657	Hnrnpa0	89	85.978	ENSTTRG00000000499	HNRNPA0	88	89.299	Tursiops_truncatus
MGP_PahariEiJ_G0019657	Hnrnpa0	89	88.364	ENSVVUG00000014736	HNRNPA0	88	87.273	Vulpes_vulpes
MGP_PahariEiJ_G0019657	Hnrnpa0	95	70.242	ENSXETG00000003833	hnrnpa0	85	70.480	Xenopus_tropicalis
MGP_PahariEiJ_G0019657	Hnrnpa0	64	70.000	ENSXMAG00000019804	HNRNPA0	95	70.414	Xiphophorus_maculatus