EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0019923 (Gene tree)
Gene ID: 110335212
Gene Symbol: Plec
Alias: Plec1
Full Name: plectin
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 65187 bases
Position: chr17:41207504-41272690
Accession: 110335212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0041964	S10_plectin	PF03501.15	1.3e-35	1	1
MGP_PahariEiJ_P0041961	S10_plectin	PF03501.15	3.8e-35	1	1
MGP_PahariEiJ_P0041956	S10_plectin	PF03501.15	3.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0041969	-	254	-	MGP_PahariEiJ_P0041969	43 (aa)	-	UPI00001822FF
MGP_PahariEiJ_T0041968	-	2078	-	MGP_PahariEiJ_P0041968	676 (aa)	-	UPI0001F78E02
MGP_PahariEiJ_T0041971	-	692	-	-	- (aa)	-	-
MGP_PahariEiJ_T0041961	-	15418	XM_021217274	MGP_PahariEiJ_P0041961	4686 (aa)	XP_021072933	UPI000A30877B
MGP_PahariEiJ_T0041960	-	14981	XM_021217281	MGP_PahariEiJ_P0041960	4543 (aa)	XP_021072940	UPI000A30528C
MGP_PahariEiJ_T0041963	-	4937	-	MGP_PahariEiJ_P0041963	1645 (aa)	-	-
MGP_PahariEiJ_T0041962	-	14988	XM_021217280	MGP_PahariEiJ_P0041962	4543 (aa)	XP_021072939	UPI000A312300
MGP_PahariEiJ_T0041965	-	2084	-	MGP_PahariEiJ_P0041965	499 (aa)	-	UPI0001F78E01
MGP_PahariEiJ_T0041964	-	3074	-	MGP_PahariEiJ_P0041964	964 (aa)	-	-
MGP_PahariEiJ_T0041967	-	2158	-	MGP_PahariEiJ_P0041967	661 (aa)	-	-
MGP_PahariEiJ_T0041966	-	2219	-	MGP_PahariEiJ_P0041966	702 (aa)	-	UPI000016C906
MGP_PahariEiJ_T0041954	-	14952	XM_021217275	MGP_PahariEiJ_P0041954	4589 (aa)	XP_021072934	UPI000A30FDF3
MGP_PahariEiJ_T0041955	-	14897	XM_021217276	MGP_PahariEiJ_P0041955	4521 (aa)	XP_021072935	UPI000A3069BE
MGP_PahariEiJ_T0041956	-	15434	XM_021217273	MGP_PahariEiJ_P0041956	4691 (aa)	XP_021072932	UPI000A3044D3
MGP_PahariEiJ_T0041957	-	14998	XM_021217278	MGP_PahariEiJ_P0041957	4548 (aa)	XP_021072937	UPI000A31223C
MGP_PahariEiJ_T0041953	-	14717	XM_021217284	MGP_PahariEiJ_P0041953	4511 (aa)	XP_021072943	UPI000A307ADA
MGP_PahariEiJ_T0041970	-	316	-	MGP_PahariEiJ_P0041970	53 (aa)	-	UPI0003F485DE
MGP_PahariEiJ_T0041958	-	14835	XM_021217282	MGP_PahariEiJ_P0041958	4534 (aa)	XP_021072941	UPI000A304486
MGP_PahariEiJ_T0041959	-	14931	XM_021217277	MGP_PahariEiJ_P0041959	4550 (aa)	XP_021072936	-

Gene Model

Click here to download MGP_PahariEiJ_G0019923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0019923's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0019923	Plec	100	93.412	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0019923	Plec	100	91.426	ENSAMEG00000006191	PLEC	100	90.045	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0019923	Plec	100	92.941	ENSANAG00000032431	PLEC	100	92.941	Aotus_nancymaae
MGP_PahariEiJ_G0019923	Plec	100	92.383	ENSBTAG00000011922	PLEC	100	92.383	Bos_taurus
MGP_PahariEiJ_G0019923	Plec	100	93.239	ENSCJAG00000021472	PLEC	100	93.239	Callithrix_jacchus
MGP_PahariEiJ_G0019923	Plec	100	92.391	ENSCAFG00000001433	PLEC	100	92.391	Canis_familiaris
MGP_PahariEiJ_G0019923	Plec	88	92.266	ENSCHIG00000022260	PLEC	99	92.266	Capra_hircus
MGP_PahariEiJ_G0019923	Plec	100	93.923	ENSTSYG00000033419	PLEC	100	93.923	Carlito_syrichta
MGP_PahariEiJ_G0019923	Plec	100	91.805	ENSCAPG00000013570	PLEC	100	93.014	Cavia_aperea
MGP_PahariEiJ_G0019923	Plec	100	95.124	ENSCPOG00000007957	PLEC	100	94.650	Cavia_porcellus
MGP_PahariEiJ_G0019923	Plec	100	93.218	ENSCCAG00000031237	PLEC	100	93.218	Cebus_capucinus
MGP_PahariEiJ_G0019923	Plec	100	93.795	ENSCATG00000009349	PLEC	100	93.795	Cercocebus_atys
MGP_PahariEiJ_G0019923	Plec	100	95.954	ENSCLAG00000012830	PLEC	100	94.587	Chinchilla_lanigera
MGP_PahariEiJ_G0019923	Plec	100	79.257	ENSCPBG00000021974	PLEC	99	72.762	Chrysemys_picta_bellii
MGP_PahariEiJ_G0019923	Plec	100	97.822	ENSCGRG00001019864	Plec	100	97.315	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0019923	Plec	100	96.545	ENSCGRG00000002714	Plec	100	96.545	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0019923	Plec	96	90.097	ENSDNOG00000031742	PLEC	99	90.097	Dasypus_novemcinctus
MGP_PahariEiJ_G0019923	Plec	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
MGP_PahariEiJ_G0019923	Plec	83	96.636	ENSEEUG00000004554	-	67	96.942	Erinaceus_europaeus
MGP_PahariEiJ_G0019923	Plec	100	92.213	ENSFCAG00000042897	PLEC	100	92.213	Felis_catus
MGP_PahariEiJ_G0019923	Plec	100	95.643	ENSFDAG00000011856	PLEC	100	94.331	Fukomys_damarensis
MGP_PahariEiJ_G0019923	Plec	100	92.761	ENSGGOG00000012217	PLEC	100	91.986	Gorilla_gorilla
MGP_PahariEiJ_G0019923	Plec	100	95.228	ENSHGLG00000012646	PLEC	100	94.303	Heterocephalus_glaber_female
MGP_PahariEiJ_G0019923	Plec	100	92.746	ENSHGLG00100011759	PLEC	100	83.368	Heterocephalus_glaber_male
MGP_PahariEiJ_G0019923	Plec	100	93.880	ENSSTOG00000023061	PLEC	100	93.722	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0019923	Plec	100	95.539	ENSJJAG00000012390	Plec	100	95.416	Jaculus_jaculus
MGP_PahariEiJ_G0019923	Plec	100	93.753	ENSMFAG00000032066	PLEC	100	93.753	Macaca_fascicularis
MGP_PahariEiJ_G0019923	Plec	100	92.761	ENSMMUG00000000388	PLEC	100	90.509	Macaca_mulatta
MGP_PahariEiJ_G0019923	Plec	100	93.759	ENSMNEG00000011406	PLEC	100	93.753	Macaca_nemestrina
MGP_PahariEiJ_G0019923	Plec	100	92.658	ENSMLEG00000033296	PLEC	100	93.404	Mandrillus_leucophaeus
MGP_PahariEiJ_G0019923	Plec	100	97.199	ENSMAUG00000001116	Plec	100	97.187	Mesocricetus_auratus
MGP_PahariEiJ_G0019923	Plec	100	93.492	ENSMICG00000016160	PLEC	100	93.477	Microcebus_murinus
MGP_PahariEiJ_G0019923	Plec	100	97.614	ENSMOCG00000000674	Plec	100	97.272	Microtus_ochrogaster
MGP_PahariEiJ_G0019923	Plec	100	99.378	MGP_CAROLIEiJ_G0019913	Plec	100	99.378	Mus_caroli
MGP_PahariEiJ_G0019923	Plec	100	99.585	ENSMUSG00000022565	Plec	100	99.585	Mus_musculus
MGP_PahariEiJ_G0019923	Plec	100	99.481	MGP_SPRETEiJ_G0020816	Plec	100	99.481	Mus_spretus
MGP_PahariEiJ_G0019923	Plec	100	90.356	ENSMPUG00000007329	PLEC	100	90.442	Mustela_putorius_furo
MGP_PahariEiJ_G0019923	Plec	100	97.199	ENSNGAG00000008931	Plec	100	96.377	Nannospalax_galili
MGP_PahariEiJ_G0019923	Plec	99	92.888	ENSMEUG00000004499	-	70	92.888	Notamacropus_eugenii
MGP_PahariEiJ_G0019923	Plec	91	91.958	ENSOPRG00000015206	PLEC	69	90.895	Ochotona_princeps
MGP_PahariEiJ_G0019923	Plec	100	95.643	ENSODEG00000014671	PLEC	100	95.643	Octodon_degus
MGP_PahariEiJ_G0019923	Plec	85	92.393	ENSOCUG00000023075	-	100	92.963	Oryctolagus_cuniculus
MGP_PahariEiJ_G0019923	Plec	100	77.584	ENSOARG00000015846	-	100	73.941	Ovis_aries
MGP_PahariEiJ_G0019923	Plec	100	92.141	ENSPPAG00000042112	PLEC	100	88.870	Pan_paniscus
MGP_PahariEiJ_G0019923	Plec	100	93.582	ENSPTRG00000020672	PLEC	100	93.582	Pan_troglodytes
MGP_PahariEiJ_G0019923	Plec	100	93.518	ENSPANG00000023403	-	100	93.518	Papio_anubis
MGP_PahariEiJ_G0019923	Plec	100	97.624	ENSPEMG00000011922	Plec	100	97.594	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0019923	Plec	100	87.668	ENSPCIG00000014981	PLEC	100	83.022	Phascolarctos_cinereus
MGP_PahariEiJ_G0019923	Plec	100	93.561	ENSPCOG00000023279	PLEC	100	93.561	Propithecus_coquereli
MGP_PahariEiJ_G0019923	Plec	100	92.244	ENSPVAG00000009376	PLEC	91	92.354	Pteropus_vampyrus
MGP_PahariEiJ_G0019923	Plec	100	98.342	ENSRNOG00000023781	Plec	100	98.230	Rattus_norvegicus
MGP_PahariEiJ_G0019923	Plec	100	92.531	ENSRBIG00000041068	PLEC	61	84.311	Rhinopithecus_bieti
MGP_PahariEiJ_G0019923	Plec	100	93.606	ENSRROG00000015881	PLEC	100	93.606	Rhinopithecus_roxellana
MGP_PahariEiJ_G0019923	Plec	100	90.900	ENSSBOG00000025259	PLEC	100	90.768	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0019923	Plec	100	85.596	ENSSHAG00000009020	PLEC	99	80.434	Sarcophilus_harrisii
MGP_PahariEiJ_G0019923	Plec	97	89.985	ENSTTRG00000010427	PLEC	95	89.985	Tursiops_truncatus
MGP_PahariEiJ_G0019923	Plec	100	91.944	ENSVVUG00000010214	PLEC	100	91.944	Vulpes_vulpes