EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020069 (Gene tree)
Gene ID: 110334768
Gene Symbol: Xrcc6
Alias: G22p1|Ku p70|Ku70
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 50781 bases
Position: chr17:47215516-47266296
Accession: 95606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0042519	SAP	PF02037.27	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0042524	-	699	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042512	-	804	-	MGP_PahariEiJ_P0042512	106 (aa)	-	UPI0001F793E2
MGP_PahariEiJ_T0042519	-	2260	-	MGP_PahariEiJ_P0042519	608 (aa)	-	-
MGP_PahariEiJ_T0042525	-	375	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042526	-	527	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042520	-	677	-	MGP_PahariEiJ_P0042520	217 (aa)	-	-
MGP_PahariEiJ_T0042521	-	803	-	MGP_PahariEiJ_P0042521	97 (aa)	-	-
MGP_PahariEiJ_T0042522	-	425	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042523	-	802	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020069	Xrcc6	99	82.401	ENSG00000196419	XRCC6	99	82.401	Homo_sapiens
MGP_PahariEiJ_G0020069	Xrcc6	99	56.557	ENSAPOG00000012704	xrcc6	99	56.956	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.049	ENSACIG00000021277	xrcc6	99	57.049	Amphilophus_citrinellus
MGP_PahariEiJ_G0020069	Xrcc6	99	55.902	ENSAOCG00000021344	xrcc6	99	56.301	Amphiprion_ocellaris
MGP_PahariEiJ_G0020069	Xrcc6	99	56.066	ENSAPEG00000020712	xrcc6	99	56.465	Amphiprion_percula
MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	ENSATEG00000007119	xrcc6	99	56.885	Anabas_testudineus
MGP_PahariEiJ_G0020069	Xrcc6	91	68.773	ENSAPLG00000004469	XRCC6	100	68.773	Anas_platyrhynchos
MGP_PahariEiJ_G0020069	Xrcc6	99	82.237	ENSANAG00000018684	XRCC6	99	82.353	Aotus_nancymaae
MGP_PahariEiJ_G0020069	Xrcc6	99	70.115	ENSANAG00000023445	-	99	70.115	Aotus_nancymaae
MGP_PahariEiJ_G0020069	Xrcc6	99	71.546	ENSANAG00000035230	-	99	71.546	Aotus_nancymaae
MGP_PahariEiJ_G0020069	Xrcc6	99	74.092	ENSANAG00000020017	-	99	73.927	Aotus_nancymaae
MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	ENSACLG00000018608	xrcc6	99	56.885	Astatotilapia_calliptera
MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	ENSAMXG00000007545	xrcc6	99	57.377	Astyanax_mexicanus
MGP_PahariEiJ_G0020069	Xrcc6	99	82.566	ENSCJAG00000045512	XRCC6	99	82.566	Callithrix_jacchus
MGP_PahariEiJ_G0020069	Xrcc6	99	82.923	ENSTSYG00000011348	XRCC6	99	82.923	Carlito_syrichta
MGP_PahariEiJ_G0020069	Xrcc6	99	77.796	ENSCCAG00000030041	-	95	77.632	Cebus_capucinus
MGP_PahariEiJ_G0020069	Xrcc6	90	84.639	ENSCCAG00000030468	-	99	84.639	Cebus_capucinus
MGP_PahariEiJ_G0020069	Xrcc6	99	65.789	ENSCCAG00000035711	-	99	65.789	Cebus_capucinus
MGP_PahariEiJ_G0020069	Xrcc6	99	67.492	ENSCCAG00000037663	-	97	67.162	Cebus_capucinus
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSCATG00000042366	XRCC6	98	83.133	Cercocebus_atys
MGP_PahariEiJ_G0020069	Xrcc6	100	84.401	ENSCLAG00000016669	XRCC6	100	84.401	Chinchilla_lanigera
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSCSAG00000005784	XRCC6	99	82.072	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020069	Xrcc6	99	72.742	ENSCPBG00000020535	XRCC6	99	72.742	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020069	Xrcc6	96	33.616	ENSCING00000000633	-	96	33.616	Ciona_intestinalis
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSCANG00000031032	XRCC6	99	82.072	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020069	Xrcc6	100	83.388	ENSCGRG00001019029	Xrcc6	100	83.553	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020069	Xrcc6	100	91.776	ENSCGRG00000001528	Xrcc6	100	91.776	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020069	Xrcc6	99	56.721	ENSCSEG00000020434	xrcc6	99	56.721	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020069	Xrcc6	99	56.721	ENSCVAG00000002189	xrcc6	99	56.721	Cyprinodon_variegatus
MGP_PahariEiJ_G0020069	Xrcc6	99	58.075	ENSDARG00000071551	xrcc6	100	58.075	Danio_rerio
MGP_PahariEiJ_G0020069	Xrcc6	78	81.538	ENSETEG00000015333	-	78	81.538	Echinops_telfairi
MGP_PahariEiJ_G0020069	Xrcc6	100	82.102	ENSEASG00005001514	XRCC6	100	82.430	Equus_asinus_asinus
MGP_PahariEiJ_G0020069	Xrcc6	100	81.117	ENSECAG00000017563	XRCC6	100	81.883	Equus_caballus
MGP_PahariEiJ_G0020069	Xrcc6	99	55.082	ENSELUG00000020301	xrcc6	99	55.082	Esox_lucius
MGP_PahariEiJ_G0020069	Xrcc6	99	68.361	ENSFALG00000011908	XRCC6	97	68.525	Ficedula_albicollis
MGP_PahariEiJ_G0020069	Xrcc6	99	58.416	ENSFHEG00000016833	xrcc6	99	58.416	Fundulus_heteroclitus
MGP_PahariEiJ_G0020069	Xrcc6	88	55.830	ENSGMOG00000013524	xrcc6	89	55.830	Gadus_morhua
MGP_PahariEiJ_G0020069	Xrcc6	99	66.939	ENSGALG00000011932	XRCC6	99	67.103	Gallus_gallus
MGP_PahariEiJ_G0020069	Xrcc6	99	56.230	ENSGAFG00000008130	xrcc6	99	56.230	Gambusia_affinis
MGP_PahariEiJ_G0020069	Xrcc6	99	55.195	ENSGACG00000004868	xrcc6	99	55.592	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020069	Xrcc6	99	71.757	ENSGAGG00000017518	XRCC6	99	71.757	Gopherus_agassizii
MGP_PahariEiJ_G0020069	Xrcc6	99	82.401	ENSGGOG00000015885	XRCC6	99	82.401	Gorilla_gorilla
MGP_PahariEiJ_G0020069	Xrcc6	91	57.651	ENSHBUG00000023281	xrcc6	99	57.651	Haplochromis_burtoni
MGP_PahariEiJ_G0020069	Xrcc6	100	83.059	ENSHGLG00000018078	XRCC6	100	83.059	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020069	Xrcc6	100	83.059	ENSHGLG00100011264	XRCC6	100	83.059	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020069	Xrcc6	99	54.023	ENSHCOG00000009821	xrcc6	99	53.670	Hippocampus_comes
MGP_PahariEiJ_G0020069	Xrcc6	99	56.373	ENSIPUG00000000767	xrcc6	100	56.209	Ictalurus_punctatus
MGP_PahariEiJ_G0020069	Xrcc6	100	86.043	ENSSTOG00000009490	XRCC6	100	86.371	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020069	Xrcc6	100	80.460	ENSJJAG00000017136	Xrcc6	100	81.281	Jaculus_jaculus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.049	ENSKMAG00000002141	xrcc6	99	57.213	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	ENSLBEG00000002691	xrcc6	99	57.938	Labrus_bergylta
MGP_PahariEiJ_G0020069	Xrcc6	89	60.396	ENSLOCG00000011533	xrcc6	99	60.396	Lepisosteus_oculatus
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSMFAG00000003352	XRCC6	99	82.072	Macaca_fascicularis
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSMMUG00000001856	XRCC6	99	82.072	Macaca_mulatta
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSMNEG00000035076	XRCC6	99	82.072	Macaca_nemestrina
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSMLEG00000019869	XRCC6	99	82.072	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020069	Xrcc6	99	55.483	ENSMAMG00000003368	xrcc6	99	55.646	Mastacembelus_armatus
MGP_PahariEiJ_G0020069	Xrcc6	95	55.290	ENSMAMG00000003405	xrcc6	97	55.290	Mastacembelus_armatus
MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	ENSMZEG00005028080	xrcc6	99	56.885	Maylandia_zebra
MGP_PahariEiJ_G0020069	Xrcc6	99	66.612	ENSMGAG00000012146	XRCC6	99	66.558	Meleagris_gallopavo
MGP_PahariEiJ_G0020069	Xrcc6	99	91.433	ENSMAUG00000017340	Xrcc6	100	91.433	Mesocricetus_auratus
MGP_PahariEiJ_G0020069	Xrcc6	99	90.280	ENSMOCG00000015717	Xrcc6	100	90.280	Microtus_ochrogaster
MGP_PahariEiJ_G0020069	Xrcc6	99	55.446	ENSMMOG00000003536	xrcc6	99	55.446	Mola_mola
MGP_PahariEiJ_G0020069	Xrcc6	99	58.197	ENSMALG00000013912	xrcc6	95	58.197	Monopterus_albus
MGP_PahariEiJ_G0020069	Xrcc6	100	90.954	MGP_CAROLIEiJ_G0020067	Xrcc6	100	90.954	Mus_caroli
MGP_PahariEiJ_G0020069	Xrcc6	100	97.204	ENSMUSG00000022471	Xrcc6	100	97.204	Mus_musculus
MGP_PahariEiJ_G0020069	Xrcc6	96	96.569	MGP_SPRETEiJ_G0020967	Xrcc6	100	96.569	Mus_spretus
MGP_PahariEiJ_G0020069	Xrcc6	100	88.322	ENSNGAG00000013750	Xrcc6	100	88.322	Nannospalax_galili
MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	ENSNBRG00000004125	xrcc6	99	57.377	Neolamprologus_brichardi
MGP_PahariEiJ_G0020069	Xrcc6	95	83.420	ENSOPRG00000002386	XRCC6	99	83.420	Ochotona_princeps
MGP_PahariEiJ_G0020069	Xrcc6	100	81.609	ENSODEG00000015847	XRCC6	100	81.609	Octodon_degus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	ENSONIG00000019715	xrcc6	99	57.377	Oreochromis_niloticus
MGP_PahariEiJ_G0020069	Xrcc6	68	75.845	ENSOANG00000011328	XRCC6	100	75.845	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020069	Xrcc6	99	84.843	ENSOCUG00000006948	XRCC6	99	85.502	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.119	ENSORLG00020007820	xrcc6	99	57.516	Oryzias_latipes_hni
MGP_PahariEiJ_G0020069	Xrcc6	99	56.956	ENSORLG00015006406	xrcc6	99	57.353	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020069	Xrcc6	99	56.628	ENSOMEG00000008998	xrcc6	99	57.026	Oryzias_melastigma
MGP_PahariEiJ_G0020069	Xrcc6	99	83.388	ENSOGAG00000008821	XRCC6	100	83.553	Otolemur_garnettii
MGP_PahariEiJ_G0020069	Xrcc6	99	70.395	ENSPPAG00000037167	XRCC6	99	70.395	Pan_paniscus
MGP_PahariEiJ_G0020069	Xrcc6	99	82.401	ENSPTRG00000022548	XRCC6	99	83.477	Pan_troglodytes
MGP_PahariEiJ_G0020069	Xrcc6	99	82.401	ENSPTRG00000045824	XRCC6	99	83.477	Pan_troglodytes
MGP_PahariEiJ_G0020069	Xrcc6	99	81.908	ENSPANG00000001252	XRCC6	99	82.960	Papio_anubis
MGP_PahariEiJ_G0020069	Xrcc6	99	61.438	ENSPKIG00000003974	xrcc6	100	60.948	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020069	Xrcc6	99	55.390	ENSPMGG00000014220	xrcc6	100	55.960	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020069	Xrcc6	100	90.132	ENSPEMG00000023446	Xrcc6	100	90.132	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020069	Xrcc6	99	77.138	ENSPCIG00000026409	XRCC6	99	76.847	Phascolarctos_cinereus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.377	ENSPFOG00000017173	xrcc6	99	57.377	Poecilia_formosa
MGP_PahariEiJ_G0020069	Xrcc6	99	57.049	ENSPLAG00000000562	xrcc6	99	57.049	Poecilia_latipinna
MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	ENSPMEG00000018478	xrcc6	99	57.541	Poecilia_mexicana
MGP_PahariEiJ_G0020069	Xrcc6	99	57.516	ENSPREG00000020957	xrcc6	93	57.516	Poecilia_reticulata
MGP_PahariEiJ_G0020069	Xrcc6	99	73.026	ENSPPYG00000011876	XRCC6	99	73.026	Pongo_abelii
MGP_PahariEiJ_G0020069	Xrcc6	100	82.895	ENSPVAG00000001168	XRCC6	100	82.895	Pteropus_vampyrus
MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	ENSPNYG00000003815	xrcc6	99	54.134	Pundamilia_nyererei
MGP_PahariEiJ_G0020069	Xrcc6	100	93.750	ENSRNOG00000006392	Xrcc6	100	93.750	Rattus_norvegicus
MGP_PahariEiJ_G0020069	Xrcc6	99	75.493	ENSRBIG00000039794	XRCC6	99	75.493	Rhinopithecus_bieti
MGP_PahariEiJ_G0020069	Xrcc6	99	82.072	ENSRROG00000030297	XRCC6	99	82.072	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020069	Xrcc6	67	67.980	ENSSBOG00000024724	-	99	67.980	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020069	Xrcc6	99	76.190	ENSSHAG00000010790	XRCC6	99	76.190	Sarcophilus_harrisii
MGP_PahariEiJ_G0020069	Xrcc6	99	60.458	ENSSFOG00015014409	xrcc6	100	60.294	Scleropages_formosus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.705	ENSSMAG00000006496	xrcc6	99	58.101	Scophthalmus_maximus
MGP_PahariEiJ_G0020069	Xrcc6	99	56.721	ENSSDUG00000007542	xrcc6	99	56.721	Seriola_dumerili
MGP_PahariEiJ_G0020069	Xrcc6	99	56.557	ENSSLDG00000009974	xrcc6	99	56.557	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020069	Xrcc6	99	72.414	ENSSPUG00000012086	XRCC6	99	72.414	Sphenodon_punctatus
MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	ENSSPAG00000015199	xrcc6	99	56.885	Stegastes_partitus
MGP_PahariEiJ_G0020069	Xrcc6	96	70.275	ENSTGUG00000009852	-	95	70.275	Taeniopygia_guttata
MGP_PahariEiJ_G0020069	Xrcc6	99	55.993	ENSTRUG00000017070	xrcc6	99	55.993	Takifugu_rubripes
MGP_PahariEiJ_G0020069	Xrcc6	95	57.576	ENSTNIG00000012947	xrcc6	99	57.576	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020069	Xrcc6	95	76.552	ENSTBEG00000011736	XRCC6	99	76.420	Tupaia_belangeri
MGP_PahariEiJ_G0020069	Xrcc6	90	83.962	ENSTTRG00000006749	XRCC6	90	84.277	Tursiops_truncatus
MGP_PahariEiJ_G0020069	Xrcc6	99	57.541	ENSXMAG00000009691	xrcc6	99	57.541	Xiphophorus_maculatus