EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020139 (Gene tree)
Gene ID: 110334748
Gene Symbol: Trmu
Alias: 1110005N20Rik|1600025P05Rik|Trmt1
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 17196 bases
Position: chr17:50883995-50901190
Accession: 110334748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0042704	tRNA_Me_trans	PF03054.16	2.4e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0042703	-	467	-	MGP_PahariEiJ_P0042703	99 (aa)	-	UPI0001DD351F
MGP_PahariEiJ_T0042704	-	1555	XM_021216622	MGP_PahariEiJ_P0042704	417 (aa)	XP_021072281	UPI000A309091
MGP_PahariEiJ_T0042705	-	315	-	MGP_PahariEiJ_P0042705	103 (aa)	-	-
MGP_PahariEiJ_T0042706	-	743	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042707	-	652	-	MGP_PahariEiJ_P0042707	57 (aa)	-	-
MGP_PahariEiJ_T0042708	-	792	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042709	-	788	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042711	-	2047	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042710	-	921	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020139	Trmu	100	89.474	ENSG00000100416	TRMU	100	93.333	Homo_sapiens
MGP_PahariEiJ_G0020139	Trmu	100	68.106	ENSAPOG00000014458	trmu	100	68.106	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020139	Trmu	99	89.183	ENSAMEG00000003319	TRMU	99	89.183	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020139	Trmu	97	67.742	ENSACIG00000002101	trmu	97	67.742	Amphilophus_citrinellus
MGP_PahariEiJ_G0020139	Trmu	100	68.585	ENSAOCG00000013155	trmu	100	68.585	Amphiprion_ocellaris
MGP_PahariEiJ_G0020139	Trmu	100	68.106	ENSAPEG00000013350	trmu	100	68.106	Amphiprion_percula
MGP_PahariEiJ_G0020139	Trmu	98	68.370	ENSATEG00000007814	trmu	100	68.370	Anabas_testudineus
MGP_PahariEiJ_G0020139	Trmu	88	82.000	ENSAPLG00000016380	TRMU	98	77.807	Anas_platyrhynchos
MGP_PahariEiJ_G0020139	Trmu	100	75.540	ENSACAG00000007720	TRMU	100	75.540	Anolis_carolinensis
MGP_PahariEiJ_G0020139	Trmu	99	87.835	ENSANAG00000038053	TRMU	97	87.835	Aotus_nancymaae
MGP_PahariEiJ_G0020139	Trmu	99	68.116	ENSACLG00000005395	trmu	99	68.116	Astatotilapia_calliptera
MGP_PahariEiJ_G0020139	Trmu	88	80.460	ENSAMXG00000005282	trmu	99	70.098	Astyanax_mexicanus
MGP_PahariEiJ_G0020139	Trmu	99	87.500	ENSBTAG00000005595	TRMU	99	87.500	Bos_taurus
MGP_PahariEiJ_G0020139	Trmu	77	57.692	WBGene00007114	mttu-1	98	40.206	Caenorhabditis_elegans
MGP_PahariEiJ_G0020139	Trmu	99	86.265	ENSCJAG00000000198	TRMU	99	86.265	Callithrix_jacchus
MGP_PahariEiJ_G0020139	Trmu	99	90.754	ENSCAFG00000000779	TRMU	98	89.928	Canis_familiaris
MGP_PahariEiJ_G0020139	Trmu	99	90.754	ENSCAFG00020009184	TRMU	98	89.928	Canis_lupus_dingo
MGP_PahariEiJ_G0020139	Trmu	100	88.249	ENSCHIG00000017074	TRMU	100	88.249	Capra_hircus
MGP_PahariEiJ_G0020139	Trmu	99	87.740	ENSTSYG00000003853	TRMU	99	87.740	Carlito_syrichta
MGP_PahariEiJ_G0020139	Trmu	96	83.055	ENSCAPG00000013034	TRMU	98	83.055	Cavia_aperea
MGP_PahariEiJ_G0020139	Trmu	99	88.193	ENSCPOG00000020780	TRMU	99	88.193	Cavia_porcellus
MGP_PahariEiJ_G0020139	Trmu	99	86.667	ENSCCAG00000021641	TRMU	99	86.667	Cebus_capucinus
MGP_PahariEiJ_G0020139	Trmu	99	87.112	ENSCATG00000032800	TRMU	99	87.112	Cercocebus_atys
MGP_PahariEiJ_G0020139	Trmu	99	90.000	ENSCLAG00000017269	TRMU	99	90.000	Chinchilla_lanigera
MGP_PahariEiJ_G0020139	Trmu	99	87.828	ENSCSAG00000005279	TRMU	99	87.828	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020139	Trmu	88	82.000	ENSCPBG00000011621	TRMU	94	78.877	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020139	Trmu	80	60.759	ENSCING00000019371	-	96	46.173	Ciona_intestinalis
MGP_PahariEiJ_G0020139	Trmu	99	87.351	ENSCANG00000041645	TRMU	99	87.351	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020139	Trmu	99	95.673	ENSCGRG00001001739	Trmu	99	95.673	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020139	Trmu	99	87.740	ENSCGRG00000002781	Trmu	99	87.740	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020139	Trmu	83	82.927	ENSCSEG00000012382	trmu	99	66.346	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020139	Trmu	100	68.345	ENSCVAG00000001366	trmu	100	68.345	Cyprinodon_variegatus
MGP_PahariEiJ_G0020139	Trmu	96	67.750	ENSDARG00000043734	trmu	96	67.750	Danio_rerio
MGP_PahariEiJ_G0020139	Trmu	54	84.581	ENSDNOG00000047245	-	84	81.250	Dasypus_novemcinctus
MGP_PahariEiJ_G0020139	Trmu	99	87.105	ENSDORG00000007455	Trmu	100	87.105	Dipodomys_ordii
MGP_PahariEiJ_G0020139	Trmu	89	41.555	FBgn0040337	CG3021	99	41.337	Drosophila_melanogaster
MGP_PahariEiJ_G0020139	Trmu	82	87.654	ENSETEG00000009394	-	66	85.593	Echinops_telfairi
MGP_PahariEiJ_G0020139	Trmu	95	53.234	ENSEBUG00000007454	trmu	99	53.234	Eptatretus_burgeri
MGP_PahariEiJ_G0020139	Trmu	98	89.242	ENSEASG00005021725	TRMU	99	88.489	Equus_asinus_asinus
MGP_PahariEiJ_G0020139	Trmu	98	89.242	ENSECAG00000000467	TRMU	99	88.489	Equus_caballus
MGP_PahariEiJ_G0020139	Trmu	70	85.000	ENSEEUG00000000074	-	78	88.889	Erinaceus_europaeus
MGP_PahariEiJ_G0020139	Trmu	99	65.291	ENSELUG00000009464	trmu	99	66.304	Esox_lucius
MGP_PahariEiJ_G0020139	Trmu	98	89.487	ENSFCAG00000006533	TRMU	99	88.916	Felis_catus
MGP_PahariEiJ_G0020139	Trmu	88	86.000	ENSFALG00000010035	TRMU	96	77.895	Ficedula_albicollis
MGP_PahariEiJ_G0020139	Trmu	93	88.630	ENSFDAG00000017472	TRMU	98	88.630	Fukomys_damarensis
MGP_PahariEiJ_G0020139	Trmu	100	68.585	ENSFHEG00000003162	trmu	100	68.585	Fundulus_heteroclitus
MGP_PahariEiJ_G0020139	Trmu	97	61.916	ENSGMOG00000001323	trmu	100	61.916	Gadus_morhua
MGP_PahariEiJ_G0020139	Trmu	88	86.000	ENSGALG00000031922	TRMU	96	77.641	Gallus_gallus
MGP_PahariEiJ_G0020139	Trmu	100	75.758	ENSGAFG00000013331	trmu	100	75.758	Gambusia_affinis
MGP_PahariEiJ_G0020139	Trmu	99	64.916	ENSGACG00000019024	trmu	99	64.916	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020139	Trmu	99	89.021	ENSGGOG00000000203	TRMU	99	89.021	Gorilla_gorilla
MGP_PahariEiJ_G0020139	Trmu	99	67.633	ENSHBUG00000023421	trmu	99	67.633	Haplochromis_burtoni
MGP_PahariEiJ_G0020139	Trmu	99	87.500	ENSHGLG00000009278	TRMU	99	87.500	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020139	Trmu	99	87.500	ENSHGLG00100018863	TRMU	99	87.500	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020139	Trmu	83	84.146	ENSHCOG00000013459	trmu	96	70.781	Hippocampus_comes
MGP_PahariEiJ_G0020139	Trmu	98	68.137	ENSIPUG00000009785	trmu	100	68.137	Ictalurus_punctatus
MGP_PahariEiJ_G0020139	Trmu	99	90.602	ENSSTOG00000010993	TRMU	99	90.602	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020139	Trmu	99	91.106	ENSJJAG00000000667	Trmu	99	91.106	Jaculus_jaculus
MGP_PahariEiJ_G0020139	Trmu	100	67.626	ENSKMAG00000008516	trmu	100	67.626	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020139	Trmu	97	68.642	ENSLBEG00000018831	trmu	97	68.642	Labrus_bergylta
MGP_PahariEiJ_G0020139	Trmu	97	72.906	ENSLACG00000013713	TRMU	97	72.906	Latimeria_chalumnae
MGP_PahariEiJ_G0020139	Trmu	96	72.932	ENSLOCG00000016066	trmu	95	72.932	Lepisosteus_oculatus
MGP_PahariEiJ_G0020139	Trmu	99	74.402	ENSLAFG00000005129	TRMU	99	74.402	Loxodonta_africana
MGP_PahariEiJ_G0020139	Trmu	99	87.828	ENSMFAG00000039767	TRMU	99	87.828	Macaca_fascicularis
MGP_PahariEiJ_G0020139	Trmu	99	87.828	ENSMMUG00000000807	TRMU	99	87.828	Macaca_mulatta
MGP_PahariEiJ_G0020139	Trmu	99	87.828	ENSMNEG00000028164	TRMU	99	87.828	Macaca_nemestrina
MGP_PahariEiJ_G0020139	Trmu	99	87.351	ENSMLEG00000033884	TRMU	99	87.351	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020139	Trmu	99	68.447	ENSMAMG00000004717	trmu	99	68.447	Mastacembelus_armatus
MGP_PahariEiJ_G0020139	Trmu	99	68.116	ENSMZEG00005015797	trmu	99	68.116	Maylandia_zebra
MGP_PahariEiJ_G0020139	Trmu	88	84.000	ENSMGAG00000007550	TRMU	95	76.074	Meleagris_gallopavo
MGP_PahariEiJ_G0020139	Trmu	99	95.433	ENSMAUG00000022282	Trmu	99	95.433	Mesocricetus_auratus
MGP_PahariEiJ_G0020139	Trmu	99	89.346	ENSMICG00000029046	TRMU	100	89.346	Microcebus_murinus
MGP_PahariEiJ_G0020139	Trmu	99	95.192	ENSMOCG00000014641	Trmu	99	95.192	Microtus_ochrogaster
MGP_PahariEiJ_G0020139	Trmu	85	80.952	ENSMMOG00000007229	trmu	100	67.548	Mola_mola
MGP_PahariEiJ_G0020139	Trmu	99	77.536	ENSMODG00000007433	TRMU	96	77.536	Monodelphis_domestica
MGP_PahariEiJ_G0020139	Trmu	98	65.625	ENSMALG00000007721	trmu	100	65.625	Monopterus_albus
MGP_PahariEiJ_G0020139	Trmu	100	100.000	MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	Mus_caroli
MGP_PahariEiJ_G0020139	Trmu	100	100.000	ENSMUSG00000022386	Trmu	100	100.000	Mus_musculus
MGP_PahariEiJ_G0020139	Trmu	100	100.000	MGP_SPRETEiJ_G0021031	Trmu	100	100.000	Mus_spretus
MGP_PahariEiJ_G0020139	Trmu	99	88.675	ENSMPUG00000002523	TRMU	99	88.675	Mustela_putorius_furo
MGP_PahariEiJ_G0020139	Trmu	99	92.289	ENSNGAG00000005132	Trmu	99	92.289	Nannospalax_galili
MGP_PahariEiJ_G0020139	Trmu	99	67.874	ENSNBRG00000022690	trmu	100	68.719	Neolamprologus_brichardi
MGP_PahariEiJ_G0020139	Trmu	99	87.589	ENSNLEG00000015773	TRMU	99	87.589	Nomascus_leucogenys
MGP_PahariEiJ_G0020139	Trmu	82	76.543	ENSMEUG00000000216	TRMU	99	69.512	Notamacropus_eugenii
MGP_PahariEiJ_G0020139	Trmu	99	88.517	ENSODEG00000014745	TRMU	99	88.517	Octodon_degus
MGP_PahariEiJ_G0020139	Trmu	99	67.874	ENSONIG00000009821	trmu	99	67.874	Oreochromis_niloticus
MGP_PahariEiJ_G0020139	Trmu	92	76.364	ENSOANG00000001891	TRMU	97	76.364	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020139	Trmu	93	88.946	ENSOCUG00000003664	TRMU	97	87.224	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020139	Trmu	98	66.344	ENSORLG00000019015	trmu	99	66.344	Oryzias_latipes
MGP_PahariEiJ_G0020139	Trmu	98	66.102	ENSORLG00020006830	trmu	99	66.102	Oryzias_latipes_hni
MGP_PahariEiJ_G0020139	Trmu	98	66.102	ENSORLG00015003907	trmu	99	66.102	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020139	Trmu	100	72.727	ENSOMEG00000015518	-	100	72.727	Oryzias_melastigma
MGP_PahariEiJ_G0020139	Trmu	58	63.333	ENSOMEG00000015541	trmu	86	63.333	Oryzias_melastigma
MGP_PahariEiJ_G0020139	Trmu	99	87.740	ENSOGAG00000008096	TRMU	99	87.740	Otolemur_garnettii
MGP_PahariEiJ_G0020139	Trmu	100	79.856	ENSOARG00000019475	TRMU	100	79.856	Ovis_aries
MGP_PahariEiJ_G0020139	Trmu	99	89.021	ENSPPAG00000033944	TRMU	99	89.021	Pan_paniscus
MGP_PahariEiJ_G0020139	Trmu	97	90.123	ENSPPRG00000004197	TRMU	99	89.157	Panthera_pardus
MGP_PahariEiJ_G0020139	Trmu	88	88.000	ENSPTIG00000014122	TRMU	98	89.474	Panthera_tigris_altaica
MGP_PahariEiJ_G0020139	Trmu	99	89.021	ENSPTRG00000014510	TRMU	99	89.021	Pan_troglodytes
MGP_PahariEiJ_G0020139	Trmu	95	90.127	ENSPANG00000023074	TRMU	96	87.258	Papio_anubis
MGP_PahariEiJ_G0020139	Trmu	98	67.150	ENSPKIG00000002849	trmu	100	67.150	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020139	Trmu	88	88.000	ENSPSIG00000013020	TRMU	96	80.055	Pelodiscus_sinensis
MGP_PahariEiJ_G0020139	Trmu	83	84.146	ENSPMGG00000004083	trmu	99	69.024	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020139	Trmu	99	95.913	ENSPEMG00000014007	Trmu	99	95.913	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020139	Trmu	96	78.195	ENSPCIG00000009923	TRMU	97	76.627	Phascolarctos_cinereus
MGP_PahariEiJ_G0020139	Trmu	95	67.337	ENSPFOG00000008197	trmu	89	67.337	Poecilia_formosa
MGP_PahariEiJ_G0020139	Trmu	99	69.343	ENSPLAG00000008414	trmu	99	69.343	Poecilia_latipinna
MGP_PahariEiJ_G0020139	Trmu	100	69.065	ENSPMEG00000004326	trmu	100	69.065	Poecilia_mexicana
MGP_PahariEiJ_G0020139	Trmu	99	69.343	ENSPREG00000007980	trmu	99	69.343	Poecilia_reticulata
MGP_PahariEiJ_G0020139	Trmu	99	89.021	ENSPPYG00000011949	TRMU	99	89.021	Pongo_abelii
MGP_PahariEiJ_G0020139	Trmu	88	84.000	ENSPCAG00000013462	TRMU	99	77.835	Procavia_capensis
MGP_PahariEiJ_G0020139	Trmu	99	88.942	ENSPCOG00000016539	TRMU	99	88.942	Propithecus_coquereli
MGP_PahariEiJ_G0020139	Trmu	83	93.902	ENSPVAG00000013202	TRMU	99	78.606	Pteropus_vampyrus
MGP_PahariEiJ_G0020139	Trmu	99	67.633	ENSPNYG00000005629	trmu	99	67.633	Pundamilia_nyererei
MGP_PahariEiJ_G0020139	Trmu	98	68.537	ENSPNAG00000006339	trmu	96	68.537	Pygocentrus_nattereri
MGP_PahariEiJ_G0020139	Trmu	100	97.362	ENSRNOG00000016465	Trmu	100	97.362	Rattus_norvegicus
MGP_PahariEiJ_G0020139	Trmu	99	87.112	ENSRBIG00000038973	TRMU	99	87.112	Rhinopithecus_bieti
MGP_PahariEiJ_G0020139	Trmu	99	87.351	ENSRROG00000004267	TRMU	99	87.351	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020139	Trmu	91	30.923	YDL033C	SLM3	91	30.923	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0020139	Trmu	99	87.952	ENSSBOG00000030184	TRMU	99	87.952	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020139	Trmu	90	67.647	ENSSFOG00015020664	trmu	98	67.647	Scleropages_formosus
MGP_PahariEiJ_G0020139	Trmu	96	68.672	ENSSMAG00000019450	trmu	96	68.672	Scophthalmus_maximus
MGP_PahariEiJ_G0020139	Trmu	100	68.106	ENSSDUG00000011913	trmu	100	68.106	Seriola_dumerili
MGP_PahariEiJ_G0020139	Trmu	100	68.345	ENSSLDG00000011684	trmu	100	68.345	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020139	Trmu	88	82.000	ENSSPUG00000017123	TRMU	95	68.250	Sphenodon_punctatus
MGP_PahariEiJ_G0020139	Trmu	100	68.106	ENSSPAG00000021875	trmu	100	68.106	Stegastes_partitus
MGP_PahariEiJ_G0020139	Trmu	98	88.235	ENSSSCG00000000007	TRMU	99	86.905	Sus_scrofa
MGP_PahariEiJ_G0020139	Trmu	88	86.000	ENSTGUG00000003663	-	100	78.820	Taeniopygia_guttata
MGP_PahariEiJ_G0020139	Trmu	90	79.775	ENSTRUG00000003403	-	89	79.775	Takifugu_rubripes
MGP_PahariEiJ_G0020139	Trmu	97	70.471	ENSTRUG00000001231	trmu	98	70.471	Takifugu_rubripes
MGP_PahariEiJ_G0020139	Trmu	83	84.146	ENSTNIG00000010484	trmu	96	70.123	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020139	Trmu	76	70.202	ENSTBEG00000011276	-	82	70.202	Tupaia_belangeri
MGP_PahariEiJ_G0020139	Trmu	99	88.333	ENSTTRG00000004160	TRMU	99	88.333	Tursiops_truncatus
MGP_PahariEiJ_G0020139	Trmu	83	91.463	ENSUAMG00000024825	TRMU	97	90.722	Ursus_americanus
MGP_PahariEiJ_G0020139	Trmu	88	86.000	ENSUMAG00000019079	TRMU	97	90.272	Ursus_maritimus
MGP_PahariEiJ_G0020139	Trmu	89	80.392	ENSVPAG00000000685	-	100	75.342	Vicugna_pacos
MGP_PahariEiJ_G0020139	Trmu	99	90.120	ENSVVUG00000024963	TRMU	99	90.120	Vulpes_vulpes
MGP_PahariEiJ_G0020139	Trmu	99	71.564	ENSXETG00000023304	trmu	99	71.564	Xenopus_tropicalis
MGP_PahariEiJ_G0020139	Trmu	99	67.308	ENSXCOG00000015105	trmu	99	67.308	Xiphophorus_couchianus
MGP_PahariEiJ_G0020139	Trmu	99	69.343	ENSXMAG00000006697	trmu	99	69.343	Xiphophorus_maculatus