EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020181 (Gene tree)
Gene ID: 110334982
Gene Symbol: Rabl2
Alias: 1110031N17Rik|Rabl2a
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 9632 bases
Position: chr17:54544496-54554127
Accession: 110334982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0042857	MMR_HSR1	PF01926.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0042861	-	827	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042860	-	879	-	MGP_PahariEiJ_P0042860	103 (aa)	-	-
MGP_PahariEiJ_T0042863	-	868	-	MGP_PahariEiJ_P0042863	64 (aa)	-	-
MGP_PahariEiJ_T0042862	-	483	-	MGP_PahariEiJ_P0042862	61 (aa)	-	-
MGP_PahariEiJ_T0042858	-	1771	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042859	-	1327	-	MGP_PahariEiJ_P0042859	138 (aa)	-	-
MGP_PahariEiJ_T0042867	-	536	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042866	-	1037	-	-	- (aa)	-	-
MGP_PahariEiJ_T0042857	-	1645	XM_021217058	MGP_PahariEiJ_P0042857	223 (aa)	XP_021072717	UPI000A30E61E
MGP_PahariEiJ_T0042865	-	852	-	MGP_PahariEiJ_P0042865	74 (aa)	-	-
MGP_PahariEiJ_T0042864	-	170	-	MGP_PahariEiJ_P0042864	56 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020181	Rabl2	69	30.380	MGP_PahariEiJ_G0026616	Rab25	75	30.380
MGP_PahariEiJ_G0020181	Rabl2	65	32.000	MGP_PahariEiJ_G0018517	Rab37	69	32.000
MGP_PahariEiJ_G0020181	Rabl2	73	31.325	MGP_PahariEiJ_G0024212	Rab35	83	31.325
MGP_PahariEiJ_G0020181	Rabl2	67	35.948	MGP_PahariEiJ_G0018314	Rab5c	71	35.948
MGP_PahariEiJ_G0020181	Rabl2	65	31.126	MGP_PahariEiJ_G0015431	Mras	77	32.099
MGP_PahariEiJ_G0020181	Rabl2	84	34.010	MGP_PahariEiJ_G0026417	Rab33b	83	34.010
MGP_PahariEiJ_G0020181	Rabl2	70	30.818	MGP_PahariEiJ_G0020817	Rab31	82	30.818
MGP_PahariEiJ_G0020181	Rabl2	65	32.886	MGP_PahariEiJ_G0030259	Rab2b	77	32.886
MGP_PahariEiJ_G0020181	Rabl2	67	37.580	MGP_PahariEiJ_G0016776	Rab1a	75	37.580
MGP_PahariEiJ_G0020181	Rabl2	67	34.194	MGP_PahariEiJ_G0020826	Rab12	64	34.194
MGP_PahariEiJ_G0020181	Rabl2	71	33.735	MGP_PahariEiJ_G0022362	Rab7	91	40.449
MGP_PahariEiJ_G0020181	Rabl2	90	31.707	MGP_PahariEiJ_G0024934	Rab14	91	31.707
MGP_PahariEiJ_G0020181	Rabl2	75	33.520	MGP_PahariEiJ_G0032112	Rab9	87	33.520
MGP_PahariEiJ_G0020181	Rabl2	67	37.908	MGP_PahariEiJ_G0015211	Rab11a	75	40.000
MGP_PahariEiJ_G0020181	Rabl2	69	30.818	MGP_PahariEiJ_G0026671	Rab13	78	30.818
MGP_PahariEiJ_G0020181	Rabl2	86	30.102	MGP_PahariEiJ_G0015453	Rab6b	92	30.102
MGP_PahariEiJ_G0020181	Rabl2	75	33.708	MGP_PahariEiJ_G0031967	Rab9b	88	33.708
MGP_PahariEiJ_G0020181	Rabl2	67	37.908	MGP_PahariEiJ_G0014033	Rab1b	76	37.908
MGP_PahariEiJ_G0020181	Rabl2	70	34.756	MGP_PahariEiJ_G0013212	Rab30	79	34.756
MGP_PahariEiJ_G0020181	Rabl2	73	34.524	MGP_PahariEiJ_G0031589	Rab33a	71	34.524
MGP_PahariEiJ_G0020181	Rabl2	65	38.926	MGP_PahariEiJ_G0018716	Rab18	72	38.926
MGP_PahariEiJ_G0020181	Rabl2	67	33.333	MGP_PahariEiJ_G0026193	Rab22a	79	33.333
MGP_PahariEiJ_G0020181	Rabl2	67	36.538	MGP_PahariEiJ_G0020730	Rab5a	82	36.538
MGP_PahariEiJ_G0020181	Rabl2	86	31.122	MGP_PahariEiJ_G0013273	Rab6a	92	31.122
MGP_PahariEiJ_G0020181	Rabl2	67	34.641	MGP_PahariEiJ_G0023919	Rab2a	92	31.658
MGP_PahariEiJ_G0020181	Rabl2	69	36.943	MGP_PahariEiJ_G0020420	Rab11b	72	36.943
MGP_PahariEiJ_G0020181	Rabl2	72	37.195	MGP_PahariEiJ_G0031135	Rab5b	74	37.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSG00000079974	RABL2B	100	88.889	Homo_sapiens
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSG00000144134	RABL2A	98	89.899	Homo_sapiens
MGP_PahariEiJ_G0020181	Rabl2	99	73.636	ENSAPOG00000023708	rabl2	99	73.636	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020181	Rabl2	100	82.819	ENSAMEG00000003173	-	100	82.819	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020181	Rabl2	99	73.182	ENSACIG00000000670	rabl2	99	73.182	Amphilophus_citrinellus
MGP_PahariEiJ_G0020181	Rabl2	99	74.091	ENSAOCG00000008069	rabl2	99	74.091	Amphiprion_ocellaris
MGP_PahariEiJ_G0020181	Rabl2	99	73.636	ENSAPEG00000003164	rabl2	99	73.636	Amphiprion_percula
MGP_PahariEiJ_G0020181	Rabl2	99	72.973	ENSATEG00000001111	rabl2	99	72.973	Anabas_testudineus
MGP_PahariEiJ_G0020181	Rabl2	74	83.133	ENSACAG00000000418	-	94	83.133	Anolis_carolinensis
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSANAG00000021001	-	97	84.163	Aotus_nancymaae
MGP_PahariEiJ_G0020181	Rabl2	99	72.273	ENSACLG00000025632	rabl2	99	72.273	Astatotilapia_calliptera
MGP_PahariEiJ_G0020181	Rabl2	96	75.587	ENSAMXG00000040611	rabl2	96	75.587	Astyanax_mexicanus
MGP_PahariEiJ_G0020181	Rabl2	100	80.087	ENSBTAG00000004876	RABL2B	100	82.743	Bos_taurus
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSCJAG00000018414	-	97	84.163	Callithrix_jacchus
MGP_PahariEiJ_G0020181	Rabl2	100	88.789	ENSCAFG00020006938	-	100	88.789	Canis_lupus_dingo
MGP_PahariEiJ_G0020181	Rabl2	100	80.519	ENSCHIG00000000591	-	100	80.952	Capra_hircus
MGP_PahariEiJ_G0020181	Rabl2	99	85.520	ENSTSYG00000004323	-	97	85.520	Carlito_syrichta
MGP_PahariEiJ_G0020181	Rabl2	96	85.981	ENSCPOG00000026899	-	96	85.981	Cavia_porcellus
MGP_PahariEiJ_G0020181	Rabl2	99	85.520	ENSCCAG00000025944	-	97	85.520	Cebus_capucinus
MGP_PahariEiJ_G0020181	Rabl2	99	83.710	ENSCATG00000034307	-	97	83.710	Cercocebus_atys
MGP_PahariEiJ_G0020181	Rabl2	99	86.878	ENSCLAG00000017218	-	99	86.878	Chinchilla_lanigera
MGP_PahariEiJ_G0020181	Rabl2	100	84.305	ENSCSAG00000004698	-	97	84.305	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020181	Rabl2	95	79.245	ENSCPBG00000011715	-	94	79.245	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020181	Rabl2	84	65.957	ENSCING00000004961	-	87	65.957	Ciona_intestinalis
MGP_PahariEiJ_G0020181	Rabl2	81	67.778	ENSCSAVG00000006042	-	87	67.778	Ciona_savignyi
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSCANG00000030879	-	97	84.163	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020181	Rabl2	100	95.067	ENSCGRG00001021894	Rabl2	100	95.067	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020181	Rabl2	91	74.877	ENSCSEG00000005479	rabl2	95	72.300	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020181	Rabl2	99	73.636	ENSCVAG00000011432	rabl2	99	73.636	Cyprinodon_variegatus
MGP_PahariEiJ_G0020181	Rabl2	99	71.818	ENSDARG00000063321	rabl2	99	71.818	Danio_rerio
MGP_PahariEiJ_G0020181	Rabl2	99	87.838	ENSDNOG00000035151	-	99	87.838	Dasypus_novemcinctus
MGP_PahariEiJ_G0020181	Rabl2	100	86.547	ENSDORG00000000003	Rabl2	100	86.547	Dipodomys_ordii
MGP_PahariEiJ_G0020181	Rabl2	100	86.996	ENSEASG00005008239	-	100	86.996	Equus_asinus_asinus
MGP_PahariEiJ_G0020181	Rabl2	100	86.996	ENSECAG00000026942	-	100	86.996	Equus_caballus
MGP_PahariEiJ_G0020181	Rabl2	100	86.547	ENSFCAG00000033642	-	100	86.547	Felis_catus
MGP_PahariEiJ_G0020181	Rabl2	100	85.202	ENSFDAG00000002113	-	100	85.202	Fukomys_damarensis
MGP_PahariEiJ_G0020181	Rabl2	99	73.636	ENSFHEG00000015015	rabl2	83	73.636	Fundulus_heteroclitus
MGP_PahariEiJ_G0020181	Rabl2	88	74.619	ENSGMOG00000018928	rabl2	100	74.619	Gadus_morhua
MGP_PahariEiJ_G0020181	Rabl2	92	77.184	ENSGALG00000032458	RABL2B	92	77.184	Gallus_gallus
MGP_PahariEiJ_G0020181	Rabl2	86	78.646	ENSGAFG00000005188	rabl2	95	74.882	Gambusia_affinis
MGP_PahariEiJ_G0020181	Rabl2	99	70.000	ENSGACG00000012474	rabl2	99	70.000	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020181	Rabl2	99	72.273	ENSHBUG00000010964	rabl2	99	72.273	Haplochromis_burtoni
MGP_PahariEiJ_G0020181	Rabl2	100	86.996	ENSHGLG00000005750	-	100	86.996	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020181	Rabl2	100	86.996	ENSHGLG00100016281	-	100	86.996	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020181	Rabl2	100	87.892	ENSSTOG00000002723	-	100	87.892	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020181	Rabl2	100	91.031	ENSJJAG00000010792	Rabl2	100	91.031	Jaculus_jaculus
MGP_PahariEiJ_G0020181	Rabl2	99	73.636	ENSKMAG00000012723	rabl2	99	73.636	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020181	Rabl2	99	74.091	ENSLBEG00000003644	rabl2	99	74.091	Labrus_bergylta
MGP_PahariEiJ_G0020181	Rabl2	96	76.279	ENSLACG00000003722	rabl2	96	76.279	Latimeria_chalumnae
MGP_PahariEiJ_G0020181	Rabl2	99	75.455	ENSLOCG00000016767	rabl2	96	75.455	Lepisosteus_oculatus
MGP_PahariEiJ_G0020181	Rabl2	99	85.068	ENSMFAG00000044775	-	97	85.068	Macaca_fascicularis
MGP_PahariEiJ_G0020181	Rabl2	99	85.068	ENSMMUG00000022914	RABL2B	97	85.068	Macaca_mulatta
MGP_PahariEiJ_G0020181	Rabl2	99	84.615	ENSMNEG00000028460	-	96	84.615	Macaca_nemestrina
MGP_PahariEiJ_G0020181	Rabl2	99	83.710	ENSMLEG00000032621	-	96	83.710	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020181	Rabl2	99	72.727	ENSMAMG00000008168	rabl2	99	72.727	Mastacembelus_armatus
MGP_PahariEiJ_G0020181	Rabl2	99	70.000	ENSMZEG00005019758	rabl2	99	70.000	Maylandia_zebra
MGP_PahariEiJ_G0020181	Rabl2	99	94.595	ENSMAUG00000010955	Rabl2	100	94.595	Mesocricetus_auratus
MGP_PahariEiJ_G0020181	Rabl2	99	89.593	ENSMICG00000031301	-	97	89.593	Microcebus_murinus
MGP_PahariEiJ_G0020181	Rabl2	99	95.045	ENSMOCG00000002775	Rabl2	99	95.045	Microtus_ochrogaster
MGP_PahariEiJ_G0020181	Rabl2	96	84.579	ENSMODG00000010838	-	98	84.579	Monodelphis_domestica
MGP_PahariEiJ_G0020181	Rabl2	99	72.727	ENSMALG00000005944	rabl2	99	72.727	Monopterus_albus
MGP_PahariEiJ_G0020181	Rabl2	100	97.758	MGP_CAROLIEiJ_G0020176	Rabl2	99	97.758	Mus_caroli
MGP_PahariEiJ_G0020181	Rabl2	100	97.758	ENSMUSG00000022621	Rabl2	100	97.758	Mus_musculus
MGP_PahariEiJ_G0020181	Rabl2	100	98.206	MGP_SPRETEiJ_G0021073	Rabl2	100	98.206	Mus_spretus
MGP_PahariEiJ_G0020181	Rabl2	100	85.650	ENSMPUG00000001806	-	100	85.650	Mustela_putorius_furo
MGP_PahariEiJ_G0020181	Rabl2	99	90.090	ENSNGAG00000012843	Rabl2	96	90.090	Nannospalax_galili
MGP_PahariEiJ_G0020181	Rabl2	99	72.273	ENSNBRG00000000489	rabl2	99	72.273	Neolamprologus_brichardi
MGP_PahariEiJ_G0020181	Rabl2	99	84.163	ENSNLEG00000030435	-	96	84.163	Nomascus_leucogenys
MGP_PahariEiJ_G0020181	Rabl2	100	85.650	ENSODEG00000015650	-	100	85.650	Octodon_degus
MGP_PahariEiJ_G0020181	Rabl2	99	72.727	ENSONIG00000014885	rabl2	99	72.727	Oreochromis_niloticus
MGP_PahariEiJ_G0020181	Rabl2	93	73.077	ENSORLG00000009874	rabl2	92	73.077	Oryzias_latipes
MGP_PahariEiJ_G0020181	Rabl2	93	73.077	ENSORLG00020001721	rabl2	92	73.077	Oryzias_latipes_hni
MGP_PahariEiJ_G0020181	Rabl2	93	73.077	ENSORLG00015014268	rabl2	92	73.077	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020181	Rabl2	93	74.038	ENSOMEG00000008576	rabl2	96	74.038	Oryzias_melastigma
MGP_PahariEiJ_G0020181	Rabl2	99	87.783	ENSOGAG00000009123	-	97	87.783	Otolemur_garnettii
MGP_PahariEiJ_G0020181	Rabl2	96	86.977	ENSPPRG00000014642	-	94	86.977	Panthera_pardus
MGP_PahariEiJ_G0020181	Rabl2	100	86.547	ENSPTIG00000018747	-	100	86.547	Panthera_tigris_altaica
MGP_PahariEiJ_G0020181	Rabl2	99	80.087	ENSPTRG00000014555	-	97	80.087	Pan_troglodytes
MGP_PahariEiJ_G0020181	Rabl2	99	80.435	ENSPANG00000036121	-	96	80.435	Papio_anubis
MGP_PahariEiJ_G0020181	Rabl2	92	79.126	ENSPKIG00000025372	rabl2	92	79.126	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020181	Rabl2	91	82.759	ENSPSIG00000014041	-	90	82.759	Pelodiscus_sinensis
MGP_PahariEiJ_G0020181	Rabl2	88	75.635	ENSPMGG00000012946	rabl2	96	75.635	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020181	Rabl2	100	96.413	ENSPEMG00000024045	Rabl2	100	96.413	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020181	Rabl2	91	84.434	ENSPCIG00000012436	-	94	80.263	Phascolarctos_cinereus
MGP_PahariEiJ_G0020181	Rabl2	96	74.884	ENSPFOG00000017960	rabl2	95	74.884	Poecilia_formosa
MGP_PahariEiJ_G0020181	Rabl2	96	75.587	ENSPLAG00000015685	rabl2	95	75.587	Poecilia_latipinna
MGP_PahariEiJ_G0020181	Rabl2	96	75.587	ENSPMEG00000004703	rabl2	95	75.587	Poecilia_mexicana
MGP_PahariEiJ_G0020181	Rabl2	87	77.835	ENSPREG00000014761	rabl2	96	77.835	Poecilia_reticulata
MGP_PahariEiJ_G0020181	Rabl2	99	84.615	ENSPPYG00000012000	-	97	84.615	Pongo_abelii
MGP_PahariEiJ_G0020181	Rabl2	99	88.235	ENSPCOG00000024865	-	97	88.235	Propithecus_coquereli
MGP_PahariEiJ_G0020181	Rabl2	99	81.545	ENSPVAG00000004539	-	98	81.545	Pteropus_vampyrus
MGP_PahariEiJ_G0020181	Rabl2	99	72.273	ENSPNYG00000004845	rabl2	99	72.273	Pundamilia_nyererei
MGP_PahariEiJ_G0020181	Rabl2	90	79.602	ENSPNAG00000024254	rabl2	96	77.465	Pygocentrus_nattereri
MGP_PahariEiJ_G0020181	Rabl2	100	96.861	ENSRNOG00000013947	Rabl2	89	96.861	Rattus_norvegicus
MGP_PahariEiJ_G0020181	Rabl2	99	84.615	ENSRBIG00000033607	-	97	84.615	Rhinopithecus_bieti
MGP_PahariEiJ_G0020181	Rabl2	99	85.068	ENSRROG00000031130	-	97	85.068	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020181	Rabl2	99	85.973	ENSSBOG00000033266	-	97	85.973	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020181	Rabl2	91	77.941	ENSSFOG00015020738	rabl2	95	76.415	Scleropages_formosus
MGP_PahariEiJ_G0020181	Rabl2	96	74.766	ENSSMAG00000004606	rabl2	96	74.766	Scophthalmus_maximus
MGP_PahariEiJ_G0020181	Rabl2	99	73.182	ENSSDUG00000014765	rabl2	99	73.182	Seriola_dumerili
MGP_PahariEiJ_G0020181	Rabl2	76	88.824	ENSSSCG00000025041	-	100	88.824	Sus_scrofa
MGP_PahariEiJ_G0020181	Rabl2	91	74.510	ENSTGUG00000016028	-	98	74.510	Taeniopygia_guttata
MGP_PahariEiJ_G0020181	Rabl2	99	73.182	ENSTRUG00000012454	rabl2	99	73.182	Takifugu_rubripes
MGP_PahariEiJ_G0020181	Rabl2	99	73.182	ENSTNIG00000017951	rabl2	99	73.182	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020181	Rabl2	91	86.139	ENSUAMG00000015761	-	90	86.139	Ursus_americanus
MGP_PahariEiJ_G0020181	Rabl2	100	85.202	ENSUMAG00000017116	-	100	85.202	Ursus_maritimus
MGP_PahariEiJ_G0020181	Rabl2	100	87.892	ENSVVUG00000025761	-	100	87.892	Vulpes_vulpes
MGP_PahariEiJ_G0020181	Rabl2	95	78.404	ENSXETG00000015712	rabl2b	95	78.404	Xenopus_tropicalis
MGP_PahariEiJ_G0020181	Rabl2	87	79.487	ENSXMAG00000004569	rabl2	95	76.056	Xiphophorus_maculatus