EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020355 (Gene tree)
Gene ID: 110334668
Gene Symbol: Tarbp2
Alias: Prbp|TRBP
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5470 bases
Position: chr17:67047650-67053119
Accession: 110334668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0043368	dsrm	PF00035.26	4.8e-34	1	2
MGP_PahariEiJ_P0043368	dsrm	PF00035.26	4.8e-34	2	2
MGP_PahariEiJ_P0043365	dsrm	PF00035.26	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0043365	-	1277	-	MGP_PahariEiJ_P0043365	274 (aa)	XP_021072147	UPI000A30C8AE
MGP_PahariEiJ_T0043364	-	1007	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043367	-	370	-	MGP_PahariEiJ_P0043367	49 (aa)	-	-
MGP_PahariEiJ_T0043366	-	2730	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043372	-	712	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043370	-	419	-	MGP_PahariEiJ_P0043370	56 (aa)	-	-
MGP_PahariEiJ_T0043363	-	1804	-	MGP_PahariEiJ_P0043363	79 (aa)	-	UPI0001889C96
MGP_PahariEiJ_T0043371	-	951	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043374	-	708	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043369	-	710	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043368	-	1523	XM_021216487	MGP_PahariEiJ_P0043368	365 (aa)	XP_021072145	UPI000A30715E
MGP_PahariEiJ_T0043373	-	482	-	MGP_PahariEiJ_P0043373	58 (aa)	-	UPI0001889C99

Gene Model

Click here to download MGP_PahariEiJ_G0020355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020355	Tarbp2	91	54.717	MGP_PahariEiJ_G0025139	Prkra	94	42.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020355	Tarbp2	100	93.989	ENSG00000139546	TARBP2	99	100.000	Homo_sapiens
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSAPOG00000019892	tarbp2	100	65.205	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSAMEG00000012601	TARBP2	100	91.803	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSACIG00000016780	tarbp2	100	64.658	Amphilophus_citrinellus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSAOCG00000005201	tarbp2	100	65.205	Amphiprion_ocellaris
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSAPEG00000008376	tarbp2	100	65.205	Amphiprion_percula
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSATEG00000025012	tarbp2	100	64.932	Anabas_testudineus
MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	ENSACAG00000001100	TARBP2	95	74.713	Anolis_carolinensis
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSANAG00000034453	TARBP2	99	98.718	Aotus_nancymaae
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSACLG00000018569	tarbp2	95	66.092	Astatotilapia_calliptera
MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	ENSAMXG00000016665	tarbp2	99	65.301	Astyanax_mexicanus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSBTAG00000000435	TARBP2	100	92.896	Bos_taurus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.169	ENSCJAG00000018668	TARBP2	100	93.169	Callithrix_jacchus
MGP_PahariEiJ_G0020355	Tarbp2	100	92.896	ENSCAFG00000006874	TARBP2	100	92.077	Canis_familiaris
MGP_PahariEiJ_G0020355	Tarbp2	100	93.989	ENSCAFG00020020735	TARBP2	100	93.169	Canis_lupus_dingo
MGP_PahariEiJ_G0020355	Tarbp2	94	97.297	ENSCHIG00000026017	TARBP2	100	90.811	Capra_hircus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSTSYG00000035683	TARBP2	99	98.718	Carlito_syrichta
MGP_PahariEiJ_G0020355	Tarbp2	82	91.556	ENSCAPG00000008981	TARBP2	100	91.556	Cavia_aperea
MGP_PahariEiJ_G0020355	Tarbp2	100	91.530	ENSCPOG00000001009	TARBP2	100	90.437	Cavia_porcellus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSCCAG00000033025	TARBP2	98	100.000	Cebus_capucinus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSCATG00000026344	TARBP2	99	97.436	Cercocebus_atys
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSCLAG00000009175	TARBP2	100	91.257	Chinchilla_lanigera
MGP_PahariEiJ_G0020355	Tarbp2	100	93.169	ENSCSAG00000005479	TARBP2	100	92.350	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	ENSCPBG00000000654	TARBP2	100	74.709	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020355	Tarbp2	98	98.246	ENSCANG00000040415	TARBP2	98	98.246	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020355	Tarbp2	100	97.260	ENSCGRG00001011856	TARBP2	100	97.260	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020355	Tarbp2	100	97.260	ENSCGRG00000009088	TARBP2	100	97.942	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSCSEG00000010631	tarbp2	100	65.753	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSCVAG00000009832	tarbp2	100	66.027	Cyprinodon_variegatus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSDARG00000070471	tarbp2	100	65.479	Danio_rerio
MGP_PahariEiJ_G0020355	Tarbp2	100	93.443	ENSDNOG00000002144	TARBP2	100	93.169	Dasypus_novemcinctus
MGP_PahariEiJ_G0020355	Tarbp2	91	100.000	ENSDORG00000029983	-	99	100.000	Dipodomys_ordii
MGP_PahariEiJ_G0020355	Tarbp2	95	93.421	ENSDORG00000001390	Tarbp2	100	93.421	Dipodomys_ordii
MGP_PahariEiJ_G0020355	Tarbp2	94	97.297	ENSETEG00000002458	TARBP2	84	96.226	Echinops_telfairi
MGP_PahariEiJ_G0020355	Tarbp2	83	89.583	ENSEBUG00000002377	tarbp2	98	55.172	Eptatretus_burgeri
MGP_PahariEiJ_G0020355	Tarbp2	100	94.536	ENSEASG00005010030	TARBP2	100	93.989	Equus_asinus_asinus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSECAG00000011695	TARBP2	99	98.718	Equus_caballus
MGP_PahariEiJ_G0020355	Tarbp2	94	97.297	ENSEEUG00000001128	-	99	84.295	Erinaceus_europaeus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSELUG00000010642	tarbp2	96	66.667	Esox_lucius
MGP_PahariEiJ_G0020355	Tarbp2	100	93.716	ENSFCAG00000007757	TARBP2	100	92.623	Felis_catus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSFDAG00000011932	TARBP2	100	91.803	Fukomys_damarensis
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSFHEG00000016118	tarbp2	100	67.151	Fundulus_heteroclitus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSGMOG00000001290	tarbp2	100	63.760	Gadus_morhua
MGP_PahariEiJ_G0020355	Tarbp2	91	90.566	ENSGALG00000048019	-	87	90.361	Gallus_gallus
MGP_PahariEiJ_G0020355	Tarbp2	85	68.880	ENSGALG00000038939	-	83	71.300	Gallus_gallus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSGAFG00000013341	tarbp2	100	64.932	Gambusia_affinis
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSGACG00000006645	tarbp2	100	64.033	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	ENSGAGG00000021169	TARBP2	100	73.425	Gopherus_agassizii
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSGGOG00000012637	TARBP2	99	97.436	Gorilla_gorilla
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSHBUG00000018639	tarbp2	100	64.110	Haplochromis_burtoni
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSHGLG00000001284	TARBP2	100	90.437	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSHGLG00100011274	TARBP2	100	90.437	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSHCOG00000001027	tarbp2	100	63.014	Hippocampus_comes
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSIPUG00000023701	tarbp2	97	66.854	Ictalurus_punctatus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.169	ENSSTOG00000003678	TARBP2	100	93.443	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSJJAG00000007198	-	99	99.074	Jaculus_jaculus
MGP_PahariEiJ_G0020355	Tarbp2	91	88.679	ENSJJAG00000014366	-	95	82.877	Jaculus_jaculus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSKMAG00000012142	tarbp2	100	64.658	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSLBEG00000015027	tarbp2	100	65.753	Labrus_bergylta
MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	ENSLACG00000007087	TARBP2	78	88.889	Latimeria_chalumnae
MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	ENSLOCG00000005711	tarbp2	100	67.671	Lepisosteus_oculatus
MGP_PahariEiJ_G0020355	Tarbp2	91	98.113	ENSLAFG00000002620	TARBP2	100	82.042	Loxodonta_africana
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSMFAG00000013567	TARBP2	99	97.436	Macaca_fascicularis
MGP_PahariEiJ_G0020355	Tarbp2	100	93.716	ENSMMUG00000018492	TARBP2	100	92.896	Macaca_mulatta
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSMNEG00000036477	TARBP2	99	97.436	Macaca_nemestrina
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSMLEG00000029583	TARBP2	99	97.436	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSMAMG00000010272	tarbp2	97	66.379	Mastacembelus_armatus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSMZEG00005006895	tarbp2	100	64.110	Maylandia_zebra
MGP_PahariEiJ_G0020355	Tarbp2	100	96.986	ENSMAUG00000019805	Tarbp2	100	96.986	Mesocricetus_auratus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSMICG00000027441	TARBP2	99	98.718	Microcebus_murinus
MGP_PahariEiJ_G0020355	Tarbp2	100	95.068	ENSMOCG00000003691	Tarbp2	100	95.068	Microtus_ochrogaster
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSMMOG00000010374	tarbp2	100	67.442	Mola_mola
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSMALG00000009773	tarbp2	100	64.578	Monopterus_albus
MGP_PahariEiJ_G0020355	Tarbp2	100	100.000	MGP_CAROLIEiJ_G0020356	Tarbp2	100	100.000	Mus_caroli
MGP_PahariEiJ_G0020355	Tarbp2	100	100.000	ENSMUSG00000023051	Tarbp2	100	100.000	Mus_musculus
MGP_PahariEiJ_G0020355	Tarbp2	100	100.000	MGP_SPRETEiJ_G0021249	Tarbp2	100	100.000	Mus_spretus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.699	ENSMPUG00000005944	TARBP2	100	93.699	Mustela_putorius_furo
MGP_PahariEiJ_G0020355	Tarbp2	100	93.716	ENSMLUG00000010035	TARBP2	100	92.623	Myotis_lucifugus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSNGAG00000017769	-	99	99.074	Nannospalax_galili
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSNBRG00000003967	TARBP2	76	60.811	Neolamprologus_brichardi
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSNBRG00000011845	-	70	88.372	Neolamprologus_brichardi
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSNLEG00000017690	TARBP2	99	98.718	Nomascus_leucogenys
MGP_PahariEiJ_G0020355	Tarbp2	91	98.113	ENSMEUG00000001916	TARBP2	100	80.274	Notamacropus_eugenii
MGP_PahariEiJ_G0020355	Tarbp2	82	91.111	ENSOPRG00000011397	TARBP2	100	91.111	Ochotona_princeps
MGP_PahariEiJ_G0020355	Tarbp2	91	100.000	ENSODEG00000013413	TARBP2	100	93.363	Octodon_degus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSONIG00000005115	tarbp2	97	66.289	Oreochromis_niloticus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSOCUG00000005700	TARBP2	100	90.437	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSORLG00000005209	tarbp2	100	65.753	Oryzias_latipes
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSORLG00020017755	tarbp2	100	64.658	Oryzias_latipes_hni
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSORLG00015013237	tarbp2	100	64.932	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSOMEG00000018860	tarbp2	100	65.205	Oryzias_melastigma
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSOGAG00000001744	TARBP2	100	92.896	Otolemur_garnettii
MGP_PahariEiJ_G0020355	Tarbp2	100	91.803	ENSOARG00000016437	TARBP2	100	92.350	Ovis_aries
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSPPAG00000030429	TARBP2	99	98.718	Pan_paniscus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.443	ENSPPRG00000000189	TARBP2	100	92.623	Panthera_pardus
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSPTIG00000007859	TARBP2	100	87.671	Panthera_tigris_altaica
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSPTRG00000005020	TARBP2	99	98.718	Pan_troglodytes
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSPANG00000010689	TARBP2	99	97.436	Papio_anubis
MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	ENSPKIG00000002455	tarbp2	100	66.940	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPMGG00000006497	tarbp2	99	64.641	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020355	Tarbp2	100	95.616	ENSPEMG00000014285	Tarbp2	100	95.616	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020355	Tarbp2	88	88.235	ENSPMAG00000000105	tarbp2	100	55.942	Petromyzon_marinus
MGP_PahariEiJ_G0020355	Tarbp2	91	98.113	ENSPCIG00000006672	TARBP2	92	80.548	Phascolarctos_cinereus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPFOG00000007586	tarbp2	100	65.753	Poecilia_formosa
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPLAG00000017659	tarbp2	100	65.205	Poecilia_latipinna
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPMEG00000007775	tarbp2	100	65.753	Poecilia_mexicana
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPREG00000007815	tarbp2	100	65.479	Poecilia_reticulata
MGP_PahariEiJ_G0020355	Tarbp2	94	97.297	ENSPPYG00000004583	TARBP2	100	84.469	Pongo_abelii
MGP_PahariEiJ_G0020355	Tarbp2	90	92.308	ENSPCAG00000005352	TARBP2	100	77.049	Procavia_capensis
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSPCOG00000013102	TARBP2	99	98.718	Propithecus_coquereli
MGP_PahariEiJ_G0020355	Tarbp2	94	98.649	ENSPVAG00000012286	TARBP2	100	88.525	Pteropus_vampyrus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSPNYG00000014125	tarbp2	100	64.110	Pundamilia_nyererei
MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	ENSPNAG00000011128	tarbp2	100	63.684	Pygocentrus_nattereri
MGP_PahariEiJ_G0020355	Tarbp2	100	96.712	ENSRNOG00000042355	Tarbp2	100	96.712	Rattus_norvegicus
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSRBIG00000027150	TARBP2	99	97.436	Rhinopithecus_bieti
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSRROG00000044783	TARBP2	99	97.436	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020355	Tarbp2	98	100.000	ENSSBOG00000027305	TARBP2	99	98.718	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020355	Tarbp2	81	78.723	ENSSBOG00000034049	-	85	75.824	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020355	Tarbp2	91	98.113	ENSSHAG00000007064	TARBP2	100	80.992	Sarcophilus_harrisii
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSSFOG00015010784	tarbp2	100	66.120	Scleropages_formosus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSSMAG00000012769	tarbp2	100	65.205	Scophthalmus_maximus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSSDUG00000018818	tarbp2	100	64.658	Seriola_dumerili
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSSLDG00000001835	tarbp2	100	64.658	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020355	Tarbp2	73	87.931	ENSSARG00000001010	TARBP2	73	83.085	Sorex_araneus
MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	ENSSPUG00000005895	TARBP2	100	52.279	Sphenodon_punctatus
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSSPAG00000022797	tarbp2	100	64.658	Stegastes_partitus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.716	ENSSSCG00000000276	TARBP2	100	93.169	Sus_scrofa
MGP_PahariEiJ_G0020355	Tarbp2	91	90.566	ENSTRUG00000014379	tarbp2	100	64.384	Takifugu_rubripes
MGP_PahariEiJ_G0020355	Tarbp2	91	90.566	ENSTNIG00000007065	tarbp2	100	64.110	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020355	Tarbp2	63	95.954	ENSTBEG00000012751	-	55	95.954	Tupaia_belangeri
MGP_PahariEiJ_G0020355	Tarbp2	100	93.169	ENSTTRG00000017177	TARBP2	100	92.896	Tursiops_truncatus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.169	ENSUAMG00000009011	TARBP2	100	92.077	Ursus_americanus
MGP_PahariEiJ_G0020355	Tarbp2	100	92.623	ENSUMAG00000010461	TARBP2	100	91.530	Ursus_maritimus
MGP_PahariEiJ_G0020355	Tarbp2	100	93.989	ENSVVUG00000028150	TARBP2	100	93.169	Vulpes_vulpes
MGP_PahariEiJ_G0020355	Tarbp2	91	88.679	ENSXETG00000012644	tarbp2	97	68.994	Xenopus_tropicalis
MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	ENSXMAG00000017836	tarbp2	100	66.027	Xiphophorus_maculatus