EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020378 (Gene tree)
Gene ID: 110335209
Gene Symbol: Gtsf1
Alias: 1700006H03Rik|Cue110
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 18368 bases
Position: chr17:67946805-67965172
Accession: 110335209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0043440	zf-U11-48K	PF05253.12	3.7e-20	1	2
MGP_PahariEiJ_P0043440	zf-U11-48K	PF05253.12	3.7e-20	2	2
MGP_PahariEiJ_P0043439	zf-U11-48K	PF05253.12	6.9e-20	1	2
MGP_PahariEiJ_P0043439	zf-U11-48K	PF05253.12	6.9e-20	2	2
MGP_PahariEiJ_P0043432	zf-U11-48K	PF05253.12	7.8e-20	1	2
MGP_PahariEiJ_P0043432	zf-U11-48K	PF05253.12	7.8e-20	2	2
MGP_PahariEiJ_P0043434	zf-U11-48K	PF05253.12	7.8e-20	1	2
MGP_PahariEiJ_P0043434	zf-U11-48K	PF05253.12	7.8e-20	2	2
MGP_PahariEiJ_P0043436	zf-U11-48K	PF05253.12	7.8e-20	1	2
MGP_PahariEiJ_P0043436	zf-U11-48K	PF05253.12	7.8e-20	2	2
MGP_PahariEiJ_P0043437	zf-U11-48K	PF05253.12	7.8e-20	1	2
MGP_PahariEiJ_P0043437	zf-U11-48K	PF05253.12	7.8e-20	2	2
MGP_PahariEiJ_P0043438	zf-U11-48K	PF05253.12	7.8e-20	1	2
MGP_PahariEiJ_P0043438	zf-U11-48K	PF05253.12	7.8e-20	2	2
MGP_PahariEiJ_P0043433	zf-U11-48K	PF05253.12	1.1e-19	1	2
MGP_PahariEiJ_P0043433	zf-U11-48K	PF05253.12	1.1e-19	2	2
MGP_PahariEiJ_P0043435	zf-U11-48K	PF05253.12	1.1e-19	1	2
MGP_PahariEiJ_P0043435	zf-U11-48K	PF05253.12	1.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0043440	-	618	-	MGP_PahariEiJ_P0043440	127 (aa)	-	-
MGP_PahariEiJ_T0043433	-	747	-	MGP_PahariEiJ_P0043433	186 (aa)	-	-
MGP_PahariEiJ_T0043432	-	816	-	MGP_PahariEiJ_P0043432	167 (aa)	XP_021072929	UPI000A30A2B6
MGP_PahariEiJ_T0043435	-	689	-	MGP_PahariEiJ_P0043435	190 (aa)	-	-
MGP_PahariEiJ_T0043434	-	767	-	MGP_PahariEiJ_P0043434	167 (aa)	XP_021072929	UPI000A30A2B6
MGP_PahariEiJ_T0043437	-	749	-	MGP_PahariEiJ_P0043437	167 (aa)	XP_021072929	UPI000A30A2B6
MGP_PahariEiJ_T0043436	-	800	-	MGP_PahariEiJ_P0043436	167 (aa)	XP_021072929	UPI000A30A2B6
MGP_PahariEiJ_T0043439	-	695	-	MGP_PahariEiJ_P0043439	161 (aa)	-	-
MGP_PahariEiJ_T0043438	-	712	-	MGP_PahariEiJ_P0043438	167 (aa)	XP_021072929	UPI000A30A2B6

Gene Model

Click here to download MGP_PahariEiJ_G0020378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020378's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSG00000170627	GTSF1	100	91.018	Homo_sapiens
MGP_PahariEiJ_G0020378	Gtsf1	92	52.137	ENSAPOG00000022724	-	95	46.000	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020378	Gtsf1	97	96.914	ENSAMEG00000000939	GTSF1	96	96.914	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020378	Gtsf1	92	50.427	ENSAOCG00000022214	-	74	42.236	Amphiprion_ocellaris
MGP_PahariEiJ_G0020378	Gtsf1	94	60.833	ENSAPLG00000004814	GTSF1	93	59.524	Anas_platyrhynchos
MGP_PahariEiJ_G0020378	Gtsf1	97	66.667	ENSACAG00000014260	-	96	60.606	Anolis_carolinensis
MGP_PahariEiJ_G0020378	Gtsf1	91	48.276	ENSACAG00000029590	-	95	48.276	Anolis_carolinensis
MGP_PahariEiJ_G0020378	Gtsf1	100	91.617	ENSANAG00000024529	GTSF1	100	91.617	Aotus_nancymaae
MGP_PahariEiJ_G0020378	Gtsf1	100	94.611	ENSBTAG00000018085	GTSF1	100	94.611	Bos_taurus
MGP_PahariEiJ_G0020378	Gtsf1	100	92.216	ENSCJAG00000018968	-	100	92.216	Callithrix_jacchus
MGP_PahariEiJ_G0020378	Gtsf1	100	87.425	ENSCJAG00000039915	-	95	84.270	Callithrix_jacchus
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSCAFG00000006465	-	100	96.407	Canis_familiaris
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSCAFG00020020373	-	94	95.732	Canis_lupus_dingo
MGP_PahariEiJ_G0020378	Gtsf1	98	93.865	ENSCHIG00000012215	-	95	93.865	Capra_hircus
MGP_PahariEiJ_G0020378	Gtsf1	100	74.534	ENSTSYG00000035266	-	100	74.251	Carlito_syrichta
MGP_PahariEiJ_G0020378	Gtsf1	100	93.701	ENSTSYG00000004679	-	100	92.771	Carlito_syrichta
MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	ENSCPOG00000008743	GTSF1	100	97.605	Cavia_porcellus
MGP_PahariEiJ_G0020378	Gtsf1	96	69.032	ENSCCAG00000032808	GTSF1	100	68.944	Cebus_capucinus
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSCATG00000036328	GTSF1	100	91.018	Cercocebus_atys
MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	ENSCLAG00000012811	GTSF1	100	97.605	Chinchilla_lanigera
MGP_PahariEiJ_G0020378	Gtsf1	96	91.613	ENSCSAG00000005394	GTSF1	99	91.083	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	ENSCHOG00000001659	GTSF1	100	94.611	Choloepus_hoffmanni
MGP_PahariEiJ_G0020378	Gtsf1	97	76.613	ENSCPBG00000005134	-	79	67.033	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020378	Gtsf1	95	61.688	ENSCPBG00000024905	-	86	61.250	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020378	Gtsf1	100	85.629	ENSCANG00000031776	-	100	85.629	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020378	Gtsf1	100	89.820	ENSCANG00000033118	GTSF1	100	89.820	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020378	Gtsf1	100	98.802	ENSCGRG00001013814	Gtsf1	100	98.802	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020378	Gtsf1	100	98.802	ENSCGRG00000007733	Gtsf1	100	98.802	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020378	Gtsf1	97	94.231	ENSDNOG00000001438	-	90	94.268	Dasypus_novemcinctus
MGP_PahariEiJ_G0020378	Gtsf1	100	97.638	ENSDORG00000003228	Gtsf1	100	97.605	Dipodomys_ordii
MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	ENSETEG00000009310	GTSF1	100	92.814	Echinops_telfairi
MGP_PahariEiJ_G0020378	Gtsf1	100	95.808	ENSEASG00005010260	GTSF1	99	89.189	Equus_asinus_asinus
MGP_PahariEiJ_G0020378	Gtsf1	100	95.808	ENSECAG00000013618	GTSF1	100	95.808	Equus_caballus
MGP_PahariEiJ_G0020378	Gtsf1	100	97.638	ENSEEUG00000005185	GTSF1	100	97.605	Erinaceus_europaeus
MGP_PahariEiJ_G0020378	Gtsf1	100	67.665	ENSFCAG00000023672	-	100	65.054	Felis_catus
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSFCAG00000010156	-	100	96.407	Felis_catus
MGP_PahariEiJ_G0020378	Gtsf1	94	53.719	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	ENSFDAG00000009383	GTSF1	100	94.012	Fukomys_damarensis
MGP_PahariEiJ_G0020378	Gtsf1	89	62.281	ENSGALG00000001109	GTSF1	95	54.545	Gallus_gallus
MGP_PahariEiJ_G0020378	Gtsf1	92	55.556	ENSGACG00000010783	-	80	50.340	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020378	Gtsf1	100	63.580	ENSGAGG00000011062	GTSF1	86	62.275	Gopherus_agassizii
MGP_PahariEiJ_G0020378	Gtsf1	51	64.615	ENSGAGG00000024765	-	60	64.615	Gopherus_agassizii
MGP_PahariEiJ_G0020378	Gtsf1	87	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
MGP_PahariEiJ_G0020378	Gtsf1	82	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSGGOG00000016063	GTSF1	100	91.018	Gorilla_gorilla
MGP_PahariEiJ_G0020378	Gtsf1	100	96.063	ENSHGLG00000002436	GTSF1	100	95.210	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020378	Gtsf1	100	96.063	ENSHGLG00100017301	GTSF1	100	95.210	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020378	Gtsf1	94	52.893	ENSIPUG00000002483	-	94	44.318	Ictalurus_punctatus
MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	ENSSTOG00000025170	GTSF1	100	98.204	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020378	Gtsf1	99	94.444	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
MGP_PahariEiJ_G0020378	Gtsf1	100	86.957	ENSJJAG00000017442	-	100	86.228	Jaculus_jaculus
MGP_PahariEiJ_G0020378	Gtsf1	92	53.846	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020378	Gtsf1	94	64.167	ENSLACG00000008870	GTSF1	98	54.974	Latimeria_chalumnae
MGP_PahariEiJ_G0020378	Gtsf1	97	96.914	ENSLAFG00000016318	GTSF1	97	96.914	Loxodonta_africana
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSMFAG00000041178	GTSF1	100	91.018	Macaca_fascicularis
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSMMUG00000003758	GTSF1	100	91.018	Macaca_mulatta
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSMNEG00000036779	GTSF1	100	91.018	Macaca_nemestrina
MGP_PahariEiJ_G0020378	Gtsf1	100	90.419	ENSMLEG00000028375	GTSF1	100	90.419	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020378	Gtsf1	91	59.829	ENSMGAG00000000685	GTSF1	83	60.684	Meleagris_gallopavo
MGP_PahariEiJ_G0020378	Gtsf1	100	74.251	ENSMAUG00000018746	Gtsf1	100	73.373	Mesocricetus_auratus
MGP_PahariEiJ_G0020378	Gtsf1	100	96.407	ENSMICG00000008444	-	100	96.407	Microcebus_murinus
MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	ENSMOCG00000018889	Gtsf1	100	98.204	Microtus_ochrogaster
MGP_PahariEiJ_G0020378	Gtsf1	100	88.820	ENSMODG00000019422	GTSF1	100	88.623	Monodelphis_domestica
MGP_PahariEiJ_G0020378	Gtsf1	100	99.401	MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.401	Mus_caroli
MGP_PahariEiJ_G0020378	Gtsf1	100	99.401	ENSMUSG00000022487	Gtsf1	100	99.401	Mus_musculus
MGP_PahariEiJ_G0020378	Gtsf1	100	99.401	MGP_SPRETEiJ_G0021272	Gtsf1	100	99.401	Mus_spretus
MGP_PahariEiJ_G0020378	Gtsf1	100	87.425	ENSMPUG00000019140	-	100	87.425	Mustela_putorius_furo
MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	ENSMPUG00000019323	-	100	95.210	Mustela_putorius_furo
MGP_PahariEiJ_G0020378	Gtsf1	98	97.581	ENSMPUG00000005669	-	98	96.951	Mustela_putorius_furo
MGP_PahariEiJ_G0020378	Gtsf1	100	95.276	ENSMLUG00000012961	-	100	95.210	Myotis_lucifugus
MGP_PahariEiJ_G0020378	Gtsf1	100	92.216	ENSMLUG00000026557	-	100	92.216	Myotis_lucifugus
MGP_PahariEiJ_G0020378	Gtsf1	100	98.204	ENSNGAG00000014213	Gtsf1	100	98.204	Nannospalax_galili
MGP_PahariEiJ_G0020378	Gtsf1	100	90.419	ENSNLEG00000017635	GTSF1	100	90.419	Nomascus_leucogenys
MGP_PahariEiJ_G0020378	Gtsf1	100	78.882	ENSMEUG00000016206	GTSF1	100	78.443	Notamacropus_eugenii
MGP_PahariEiJ_G0020378	Gtsf1	100	68.862	ENSOPRG00000017277	GTSF1	100	68.862	Ochotona_princeps
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSODEG00000014220	GTSF1	100	96.407	Octodon_degus
MGP_PahariEiJ_G0020378	Gtsf1	97	73.387	ENSOANG00000011386	GTSF1	99	68.675	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020378	Gtsf1	100	96.273	ENSOCUG00000024495	GTSF1	100	95.808	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020378	Gtsf1	100	44.961	ENSORLG00015005017	-	71	50.877	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020378	Gtsf1	96	96.129	ENSOGAG00000017227	GTSF1	94	94.340	Otolemur_garnettii
MGP_PahariEiJ_G0020378	Gtsf1	100	95.210	ENSOARG00000016162	GTSF1	100	95.210	Ovis_aries
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSPPAG00000028506	GTSF1	100	91.018	Pan_paniscus
MGP_PahariEiJ_G0020378	Gtsf1	100	96.407	ENSPPRG00000004344	-	100	96.407	Panthera_pardus
MGP_PahariEiJ_G0020378	Gtsf1	100	86.228	ENSPPRG00000017612	-	98	82.320	Panthera_pardus
MGP_PahariEiJ_G0020378	Gtsf1	100	86.826	ENSPTIG00000010868	-	98	82.873	Panthera_tigris_altaica
MGP_PahariEiJ_G0020378	Gtsf1	100	96.407	ENSPTIG00000020415	-	100	96.407	Panthera_tigris_altaica
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSPTRG00000005041	GTSF1	100	91.018	Pan_troglodytes
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSPANG00000020579	GTSF1	100	91.018	Papio_anubis
MGP_PahariEiJ_G0020378	Gtsf1	97	74.194	ENSPSIG00000009968	GTSF1	89	64.641	Pelodiscus_sinensis
MGP_PahariEiJ_G0020378	Gtsf1	91	49.573	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
MGP_PahariEiJ_G0020378	Gtsf1	100	98.802	ENSPEMG00000009595	Gtsf1	100	98.802	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020378	Gtsf1	100	82.635	ENSPCIG00000006731	GTSF1	100	82.635	Phascolarctos_cinereus
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSPPYG00000004605	GTSF1	100	91.018	Pongo_abelii
MGP_PahariEiJ_G0020378	Gtsf1	97	83.974	ENSPCOG00000015201	-	99	80.864	Propithecus_coquereli
MGP_PahariEiJ_G0020378	Gtsf1	100	96.063	ENSPCOG00000016907	-	100	95.808	Propithecus_coquereli
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSPVAG00000000333	GTSF1	100	96.407	Pteropus_vampyrus
MGP_PahariEiJ_G0020378	Gtsf1	94	54.545	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
MGP_PahariEiJ_G0020378	Gtsf1	100	99.401	ENSRNOG00000036831	Gtsf1	94	98.870	Rattus_norvegicus
MGP_PahariEiJ_G0020378	Gtsf1	100	82.635	ENSRBIG00000039916	-	95	79.330	Rhinopithecus_bieti
MGP_PahariEiJ_G0020378	Gtsf1	100	90.419	ENSRBIG00000043438	-	100	90.419	Rhinopithecus_bieti
MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	ENSRROG00000008137	GTSF1	100	91.018	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020378	Gtsf1	100	92.814	ENSSBOG00000029460	GTSF1	100	92.814	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020378	Gtsf1	100	88.820	ENSSHAG00000011633	GTSF1	100	88.623	Sarcophilus_harrisii
MGP_PahariEiJ_G0020378	Gtsf1	100	96.063	ENSSARG00000004928	GTSF1	78	96.154	Sorex_araneus
MGP_PahariEiJ_G0020378	Gtsf1	86	70.909	ENSSPUG00000010064	GTSF1	93	70.909	Sphenodon_punctatus
MGP_PahariEiJ_G0020378	Gtsf1	100	95.808	ENSSSCG00000026333	GTSF1	100	95.808	Sus_scrofa
MGP_PahariEiJ_G0020378	Gtsf1	94	56.198	ENSTGUG00000002008	-	100	55.469	Taeniopygia_guttata
MGP_PahariEiJ_G0020378	Gtsf1	96	94.410	ENSTBEG00000006154	GTSF1	100	94.410	Tupaia_belangeri
MGP_PahariEiJ_G0020378	Gtsf1	100	93.413	ENSTTRG00000004470	GTSF1	100	93.413	Tursiops_truncatus
MGP_PahariEiJ_G0020378	Gtsf1	100	97.006	ENSUAMG00000021669	GTSF1	94	96.341	Ursus_americanus
MGP_PahariEiJ_G0020378	Gtsf1	100	97.006	ENSUMAG00000011279	GTSF1	100	97.006	Ursus_maritimus
MGP_PahariEiJ_G0020378	Gtsf1	100	94.611	ENSVPAG00000007016	GTSF1	100	94.611	Vicugna_pacos
MGP_PahariEiJ_G0020378	Gtsf1	100	96.850	ENSVVUG00000023687	-	90	92.179	Vulpes_vulpes
MGP_PahariEiJ_G0020378	Gtsf1	99	68.254	ENSXETG00000033546	gtsf1	77	61.143	Xenopus_tropicalis