EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020379 (Gene tree)
Gene ID: 110335318
Gene Symbol: Gtsf2
Alias: BC048502
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 8079 bases
Position: chr17:67973275-67981353
Accession: 110335318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0043441	zf-U11-48K	PF05253.12	3.8e-18	1	2
MGP_PahariEiJ_P0043441	zf-U11-48K	PF05253.12	3.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0043441	-	718	XM_021217405	MGP_PahariEiJ_P0043441	154 (aa)	XP_021073064	UPI000A30AA45

Gene Model

Click here to download MGP_PahariEiJ_G0020379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020379	Gtsf2	88	56.429	MGP_PahariEiJ_G0026055	Gtsf1l	89	56.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020379	Gtsf2	99	75.163	ENSAMEG00000000958	-	100	75.163	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020379	Gtsf2	100	73.548	ENSCAFG00000006463	-	100	73.548	Canis_familiaris
MGP_PahariEiJ_G0020379	Gtsf2	99	73.203	ENSCAFG00020020371	-	97	73.203	Canis_lupus_dingo
MGP_PahariEiJ_G0020379	Gtsf2	100	65.161	ENSCPOG00000023851	-	100	65.161	Cavia_porcellus
MGP_PahariEiJ_G0020379	Gtsf2	95	63.265	ENSCLAG00000008579	-	100	63.265	Chinchilla_lanigera
MGP_PahariEiJ_G0020379	Gtsf2	100	81.169	ENSCGRG00001016136	Gtsf2	100	81.169	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020379	Gtsf2	100	81.169	ENSCGRG00000012950	Gtsf2	100	81.169	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020379	Gtsf2	100	74.026	ENSDORG00000026087	Gtsf2	100	74.026	Dipodomys_ordii
MGP_PahariEiJ_G0020379	Gtsf2	68	66.981	ENSEASG00005010262	-	97	66.981	Equus_asinus_asinus
MGP_PahariEiJ_G0020379	Gtsf2	68	71.429	ENSECAG00000014413	-	97	71.429	Equus_caballus
MGP_PahariEiJ_G0020379	Gtsf2	71	72.477	ENSFCAG00000031316	-	93	72.477	Felis_catus
MGP_PahariEiJ_G0020379	Gtsf2	100	65.584	ENSFDAG00000019555	-	100	65.584	Fukomys_damarensis
MGP_PahariEiJ_G0020379	Gtsf2	92	72.028	ENSHGLG00000002798	-	100	69.032	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020379	Gtsf2	92	72.028	ENSHGLG00100012359	-	100	69.032	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020379	Gtsf2	97	68.667	ENSSTOG00000030158	-	100	68.667	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020379	Gtsf2	100	79.870	ENSJJAG00000016320	Gtsf2	100	79.870	Jaculus_jaculus
MGP_PahariEiJ_G0020379	Gtsf2	52	88.750	ENSMAUG00000014687	-	89	87.654	Mesocricetus_auratus
MGP_PahariEiJ_G0020379	Gtsf2	99	86.184	ENSMAUG00000017189	-	94	86.184	Mesocricetus_auratus
MGP_PahariEiJ_G0020379	Gtsf2	100	84.416	ENSMOCG00000014770	Gtsf2	100	84.416	Microtus_ochrogaster
MGP_PahariEiJ_G0020379	Gtsf2	100	96.104	MGP_CAROLIEiJ_G0020380	Gtsf2	100	96.104	Mus_caroli
MGP_PahariEiJ_G0020379	Gtsf2	100	96.753	ENSMUSG00000053508	Gtsf2	100	96.753	Mus_musculus
MGP_PahariEiJ_G0020379	Gtsf2	100	96.753	MGP_SPRETEiJ_G0021273	Gtsf2	100	96.753	Mus_spretus
MGP_PahariEiJ_G0020379	Gtsf2	100	76.129	ENSMPUG00000005664	-	100	76.129	Mustela_putorius_furo
MGP_PahariEiJ_G0020379	Gtsf2	100	74.026	ENSNGAG00000008752	Gtsf2	100	74.026	Nannospalax_galili
MGP_PahariEiJ_G0020379	Gtsf2	87	65.672	ENSODEG00000013228	-	98	63.265	Octodon_degus
MGP_PahariEiJ_G0020379	Gtsf2	82	75.591	ENSPPRG00000004157	-	99	75.591	Panthera_pardus
MGP_PahariEiJ_G0020379	Gtsf2	82	75.591	ENSPTIG00000020670	-	99	75.591	Panthera_tigris_altaica
MGP_PahariEiJ_G0020379	Gtsf2	100	82.468	ENSPEMG00000014641	-	100	82.468	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020379	Gtsf2	100	88.961	ENSPEMG00000010828	-	100	88.961	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020379	Gtsf2	100	92.857	ENSRNOG00000036830	RGD1563200	100	92.857	Rattus_norvegicus
MGP_PahariEiJ_G0020379	Gtsf2	98	61.842	ENSSSCG00000000296	-	92	61.842	Sus_scrofa
MGP_PahariEiJ_G0020379	Gtsf2	68	77.143	ENSUAMG00000021668	-	96	77.143	Ursus_americanus
MGP_PahariEiJ_G0020379	Gtsf2	68	77.143	ENSUMAG00000011281	-	96	77.143	Ursus_maritimus
MGP_PahariEiJ_G0020379	Gtsf2	68	74.286	ENSVVUG00000023684	-	96	74.286	Vulpes_vulpes