EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020420 (Gene tree)
Gene ID: 110335637
Gene Symbol: Rab11b
Alias: A730055L17Rik
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 17753 bases
Position: chr18:1634694-1652446
Accession: 110335637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0043578	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0043578	-	6032	-	MGP_PahariEiJ_P0043578	218 (aa)	XP_021073570	UPI000006CF2D
MGP_PahariEiJ_T0043579	-	1320	-	MGP_PahariEiJ_P0043579	193 (aa)	-	-
MGP_PahariEiJ_T0043580	-	505	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020420	Rab11b	72	42.675	MGP_PahariEiJ_G0026193	Rab22a	81	42.675
MGP_PahariEiJ_G0020420	Rab11b	94	33.649	MGP_PahariEiJ_G0030851	Rab36	79	33.649
MGP_PahariEiJ_G0020420	Rab11b	72	37.580	MGP_PahariEiJ_G0013273	Rab6a	75	37.580
MGP_PahariEiJ_G0020420	Rab11b	76	48.193	MGP_PahariEiJ_G0024212	Rab35	99	42.105
MGP_PahariEiJ_G0020420	Rab11b	72	49.045	MGP_PahariEiJ_G0020730	Rab5a	84	49.045
MGP_PahariEiJ_G0020420	Rab11b	96	39.524	MGP_PahariEiJ_G0013212	Rab30	97	39.524
MGP_PahariEiJ_G0020420	Rab11b	81	40.331	MGP_PahariEiJ_G0031589	Rab33a	75	40.331
MGP_PahariEiJ_G0020420	Rab11b	70	36.129	MGP_PahariEiJ_G0026889	Nras	95	37.241
MGP_PahariEiJ_G0020420	Rab11b	74	35.404	MGP_PahariEiJ_G0015453	Rab6b	77	35.404
MGP_PahariEiJ_G0020420	Rab11b	74	41.615	MGP_PahariEiJ_G0020817	Rab31	83	41.615
MGP_PahariEiJ_G0020420	Rab11b	100	91.284	MGP_PahariEiJ_G0015211	Rab11a	100	96.078
MGP_PahariEiJ_G0020420	Rab11b	80	52.299	MGP_PahariEiJ_G0024934	Rab14	81	52.299
MGP_PahariEiJ_G0020420	Rab11b	72	36.943	MGP_PahariEiJ_G0020181	Rabl2	69	36.943
MGP_PahariEiJ_G0020420	Rab11b	78	55.556	MGP_PahariEiJ_G0023919	Rab2a	81	55.556
MGP_PahariEiJ_G0020420	Rab11b	65	30.986	MGP_PahariEiJ_G0027868	Arl8a	72	30.986
MGP_PahariEiJ_G0020420	Rab11b	78	39.773	MGP_PahariEiJ_G0026417	Rab33b	76	39.773
MGP_PahariEiJ_G0020420	Rab11b	96	48.095	MGP_PahariEiJ_G0014033	Rab1b	99	48.095
MGP_PahariEiJ_G0020420	Rab11b	94	42.029	MGP_PahariEiJ_G0018314	Rab5c	90	42.029
MGP_PahariEiJ_G0020420	Rab11b	88	33.508	MGP_PahariEiJ_G0027261	Rab23	80	33.508
MGP_PahariEiJ_G0020420	Rab11b	75	44.578	MGP_PahariEiJ_G0018517	Rab37	77	44.578
MGP_PahariEiJ_G0020420	Rab11b	78	32.941	MGP_PahariEiJ_G0022808	Kras	93	34.066
MGP_PahariEiJ_G0020420	Rab11b	76	47.273	MGP_PahariEiJ_G0026671	Rab13	82	47.273
MGP_PahariEiJ_G0020420	Rab11b	72	31.646	MGP_PahariEiJ_G0015431	Mras	81	34.118
MGP_PahariEiJ_G0020420	Rab11b	55	30.894	MGP_PahariEiJ_G0029472	Arl4a	60	30.894
MGP_PahariEiJ_G0020420	Rab11b	99	45.581	MGP_PahariEiJ_G0016776	Rab1a	100	45.581
MGP_PahariEiJ_G0020420	Rab11b	72	40.491	MGP_PahariEiJ_G0022362	Rab7	93	42.857
MGP_PahariEiJ_G0020420	Rab11b	77	41.040	MGP_PahariEiJ_G0031967	Rab9b	86	41.040
MGP_PahariEiJ_G0020420	Rab11b	94	43.689	MGP_PahariEiJ_G0031135	Rab5b	91	43.689
MGP_PahariEiJ_G0020420	Rab11b	100	60.360	MGP_PahariEiJ_G0026616	Rab25	100	60.360
MGP_PahariEiJ_G0020420	Rab11b	94	38.095	MGP_PahariEiJ_G0032112	Rab9	97	38.095
MGP_PahariEiJ_G0020420	Rab11b	70	33.117	MGP_PahariEiJ_G0017931	Rab34	59	33.117
MGP_PahariEiJ_G0020420	Rab11b	95	48.387	MGP_PahariEiJ_G0030259	Rab2b	99	48.387
MGP_PahariEiJ_G0020420	Rab11b	76	41.916	MGP_PahariEiJ_G0020826	Rab12	84	37.264
MGP_PahariEiJ_G0020420	Rab11b	68	35.333	MGP_PahariEiJ_G0013880	Hras	85	36.420
MGP_PahariEiJ_G0020420	Rab11b	75	34.146	MGP_PahariEiJ_G0021797	Rheb	89	34.146
MGP_PahariEiJ_G0020420	Rab11b	74	47.531	MGP_PahariEiJ_G0018716	Rab18	78	47.531
MGP_PahariEiJ_G0020420	Rab11b	80	44.000	MGP_PahariEiJ_G0029630	Rab15	82	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSG00000185236	RAB11B	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0020420	Rab11b	99	98.630	ENSAMEG00000004955	RAB11B	99	98.630	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020420	Rab11b	83	92.265	ENSACIG00000024374	rab11ba	70	97.059	Amphilophus_citrinellus
MGP_PahariEiJ_G0020420	Rab11b	100	94.495	ENSAOCG00000018050	rab11ba	100	94.495	Amphiprion_ocellaris
MGP_PahariEiJ_G0020420	Rab11b	100	94.037	ENSAPEG00000009177	rab11ba	100	94.037	Amphiprion_percula
MGP_PahariEiJ_G0020420	Rab11b	100	95.413	ENSATEG00000023730	rab11ba	100	95.413	Anabas_testudineus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSANAG00000037616	RAB11B	100	100.000	Aotus_nancymaae
MGP_PahariEiJ_G0020420	Rab11b	100	93.119	ENSACLG00000005420	rab11ba	100	93.119	Astatotilapia_calliptera
MGP_PahariEiJ_G0020420	Rab11b	93	87.685	ENSACLG00000018852	-	92	87.685	Astatotilapia_calliptera
MGP_PahariEiJ_G0020420	Rab11b	99	80.556	WBGene00004274	rab-11.1	99	80.556	Caenorhabditis_elegans
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCJAG00000010778	RAB11B	100	100.000	Callithrix_jacchus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCAFG00000032060	RAB11B	100	100.000	Canis_familiaris
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCAFG00020022184	RAB11B	100	100.000	Canis_lupus_dingo
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSTSYG00000014758	RAB11B	100	100.000	Carlito_syrichta
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSCPOG00000030154	RAB11B	100	99.541	Cavia_porcellus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCCAG00000031042	RAB11B	100	100.000	Cebus_capucinus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCLAG00000003207	RAB11B	100	100.000	Chinchilla_lanigera
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCSAG00000008024	RAB11B	100	100.000	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020420	Rab11b	100	85.780	ENSCHOG00000013525	RAB11B	100	85.780	Choloepus_hoffmanni
MGP_PahariEiJ_G0020420	Rab11b	100	84.475	ENSCING00000009526	-	100	84.475	Ciona_intestinalis
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCANG00000040517	RAB11B	100	100.000	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCGRG00001013827	Rab11b	100	100.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSCGRG00000010967	Rab11b	100	100.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020420	Rab11b	100	94.495	ENSCSEG00000007121	rab11ba	84	94.495	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020420	Rab11b	100	96.330	ENSDARG00000041878	rab11ba	100	96.330	Danio_rerio
MGP_PahariEiJ_G0020420	Rab11b	100	98.165	ENSDNOG00000004134	-	100	98.165	Dasypus_novemcinctus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSDNOG00000014618	RAB11B	97	100.000	Dasypus_novemcinctus
MGP_PahariEiJ_G0020420	Rab11b	100	99.083	ENSDORG00000006304	Rab11b	100	99.083	Dipodomys_ordii
MGP_PahariEiJ_G0020420	Rab11b	100	94.037	ENSEBUG00000011775	rab11ba	99	94.146	Eptatretus_burgeri
MGP_PahariEiJ_G0020420	Rab11b	100	81.651	ENSEBUG00000015447	-	100	81.651	Eptatretus_burgeri
MGP_PahariEiJ_G0020420	Rab11b	66	100.000	ENSEEUG00000009165	-	100	100.000	Erinaceus_europaeus
MGP_PahariEiJ_G0020420	Rab11b	89	92.784	ENSELUG00000019240	-	99	92.784	Esox_lucius
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSFCAG00000015216	RAB11B	100	99.541	Felis_catus
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSFDAG00000019872	RAB11B	100	99.541	Fukomys_damarensis
MGP_PahariEiJ_G0020420	Rab11b	100	94.037	ENSFHEG00000022642	rab11ba	100	94.037	Fundulus_heteroclitus
MGP_PahariEiJ_G0020420	Rab11b	100	92.661	ENSGMOG00000007390	rab11ba	99	92.661	Gadus_morhua
MGP_PahariEiJ_G0020420	Rab11b	100	94.495	ENSGAFG00000005679	rab11ba	100	94.495	Gambusia_affinis
MGP_PahariEiJ_G0020420	Rab11b	100	99.083	ENSGAGG00000012557	-	100	99.083	Gopherus_agassizii
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSHGLG00000014984	RAB11B	100	100.000	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSHGLG00100003638	RAB11B	100	99.541	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSSTOG00000031571	RAB11B	100	100.000	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSJJAG00000018891	Rab11b	100	100.000	Jaculus_jaculus
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSKMAG00000006082	-	100	94.954	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSLBEG00000006087	rab11ba	100	94.954	Labrus_bergylta
MGP_PahariEiJ_G0020420	Rab11b	78	99.412	ENSLACG00000016974	RAB11B	99	99.412	Latimeria_chalumnae
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSLAFG00000013598	RAB11B	100	100.000	Loxodonta_africana
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSMNEG00000039759	-	100	100.000	Macaca_nemestrina
MGP_PahariEiJ_G0020420	Rab11b	100	94.495	ENSMAMG00000018556	rab11ba	100	94.495	Mastacembelus_armatus
MGP_PahariEiJ_G0020420	Rab11b	100	93.119	ENSMZEG00005010947	rab11ba	100	93.119	Maylandia_zebra
MGP_PahariEiJ_G0020420	Rab11b	93	87.685	ENSMZEG00005019251	-	92	87.685	Maylandia_zebra
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSMAUG00000021579	Rab11b	100	99.541	Mesocricetus_auratus
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSMOCG00000012667	Rab11b	100	99.541	Microtus_ochrogaster
MGP_PahariEiJ_G0020420	Rab11b	100	92.202	ENSMALG00000021949	rab11ba	100	92.202	Monopterus_albus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	MGP_CAROLIEiJ_G0021415	Rab11b	100	100.000	Mus_caroli
MGP_PahariEiJ_G0020420	Rab11b	100	99.083	ENSMUSG00000077450	Rab11b	100	99.083	Mus_musculus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	MGP_SPRETEiJ_G0022327	Rab11b	100	100.000	Mus_spretus
MGP_PahariEiJ_G0020420	Rab11b	100	99.541	ENSMPUG00000007263	RAB11B	100	99.541	Mustela_putorius_furo
MGP_PahariEiJ_G0020420	Rab11b	100	95.475	ENSMLUG00000002308	-	100	95.475	Myotis_lucifugus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSNGAG00000015757	Rab11b	100	100.000	Nannospalax_galili
MGP_PahariEiJ_G0020420	Rab11b	100	93.578	ENSNBRG00000023898	rab11ba	84	93.578	Neolamprologus_brichardi
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSNLEG00000001733	RAB11B	100	100.000	Nomascus_leucogenys
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSODEG00000011371	RAB11B	100	100.000	Octodon_degus
MGP_PahariEiJ_G0020420	Rab11b	100	94.037	ENSONIG00000002535	rab11ba	100	94.037	Oreochromis_niloticus
MGP_PahariEiJ_G0020420	Rab11b	74	98.137	ENSOCUG00000028208	RAB11B	64	98.137	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020420	Rab11b	99	95.853	ENSORLG00000015307	rab11ba	99	95.853	Oryzias_latipes
MGP_PahariEiJ_G0020420	Rab11b	99	95.853	ENSORLG00020020816	rab11ba	99	95.853	Oryzias_latipes_hni
MGP_PahariEiJ_G0020420	Rab11b	99	96.296	ENSORLG00015016946	rab11ba	81	96.296	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020420	Rab11b	99	95.853	ENSOMEG00000002581	rab11ba	99	95.853	Oryzias_melastigma
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSOGAG00000003227	RAB11B	99	100.000	Otolemur_garnettii
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSOARG00000003801	RAB11B	97	100.000	Ovis_aries
MGP_PahariEiJ_G0020420	Rab11b	83	95.556	ENSPPRG00000010160	RAB11B	88	95.556	Panthera_pardus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSPEMG00000014536	Rab11b	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020420	Rab11b	94	80.952	ENSPMAG00000009335	-	100	80.952	Petromyzon_marinus
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSPFOG00000006159	rab11ba	100	94.954	Poecilia_formosa
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSPLAG00000014243	rab11ba	100	94.954	Poecilia_latipinna
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSPMEG00000007917	rab11ba	75	94.954	Poecilia_mexicana
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSPREG00000006357	rab11ba	78	94.954	Poecilia_reticulata
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSPPYG00000009504	RAB11B	100	100.000	Pongo_abelii
MGP_PahariEiJ_G0020420	Rab11b	100	91.284	ENSPCAG00000016118	RAB11B	100	91.284	Procavia_capensis
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSPCOG00000028053	RAB11B	100	100.000	Propithecus_coquereli
MGP_PahariEiJ_G0020420	Rab11b	67	97.945	ENSPCOG00000008655	-	100	97.945	Propithecus_coquereli
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSPVAG00000009645	RAB11B	100	100.000	Pteropus_vampyrus
MGP_PahariEiJ_G0020420	Rab11b	93	78.537	ENSPNYG00000023810	-	90	78.537	Pundamilia_nyererei
MGP_PahariEiJ_G0020420	Rab11b	100	93.119	ENSPNYG00000019644	rab11ba	100	93.119	Pundamilia_nyererei
MGP_PahariEiJ_G0020420	Rab11b	100	97.248	ENSPNAG00000020475	rab11ba	100	97.248	Pygocentrus_nattereri
MGP_PahariEiJ_G0020420	Rab11b	100	97.706	ENSPNAG00000006431	-	100	97.706	Pygocentrus_nattereri
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSRNOG00000007648	Rab11b	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSSBOG00000035094	RAB11B	100	100.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSSDUG00000002965	rab11ba	100	94.954	Seriola_dumerili
MGP_PahariEiJ_G0020420	Rab11b	100	94.954	ENSSLDG00000005221	rab11ba	100	94.954	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020420	Rab11b	100	94.037	ENSSPAG00000017313	rab11ba	100	94.037	Stegastes_partitus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSSSCG00000013600	RAB11B	100	100.000	Sus_scrofa
MGP_PahariEiJ_G0020420	Rab11b	59	100.000	ENSTBEG00000014750	-	100	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSTTRG00000009758	RAB11B	100	100.000	Tursiops_truncatus
MGP_PahariEiJ_G0020420	Rab11b	94	80.488	ENSUMAG00000014594	RAB11B	97	80.488	Ursus_maritimus
MGP_PahariEiJ_G0020420	Rab11b	100	100.000	ENSVVUG00000025210	RAB11B	100	100.000	Vulpes_vulpes
MGP_PahariEiJ_G0020420	Rab11b	100	95.413	ENSXETG00000021890	rab11b.2	99	95.413	Xenopus_tropicalis
MGP_PahariEiJ_G0020420	Rab11b	61	97.744	ENSXCOG00000009194	-	98	97.744	Xiphophorus_couchianus
MGP_PahariEiJ_G0020420	Rab11b	100	94.495	ENSXMAG00000013416	rab11ba	100	94.495	Xiphophorus_maculatus