EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020472 (Gene tree)
Gene ID: 110335413
Gene Symbol: Skiv2l
Alias: 4930534J06Rik|Ski2w
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 11329 bases
Position: chr18:2756613-2767941
Accession: 110335413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0043845	rRNA_proc-arch	PF13234.6	3.7e-42	1	1
MGP_PahariEiJ_P0043849	rRNA_proc-arch	PF13234.6	2.8e-18	1	2
MGP_PahariEiJ_P0043849	rRNA_proc-arch	PF13234.6	2.8e-18	2	2
MGP_PahariEiJ_P0043845	DEAD	PF00270.29	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0043844	-	4091	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043845	-	3924	XM_021217544	MGP_PahariEiJ_P0043845	1244 (aa)	XP_021073203	UPI000A30E887
MGP_PahariEiJ_T0043846	-	3968	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043847	-	4525	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043852	-	833	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043854	-	881	-	MGP_PahariEiJ_P0043854	92 (aa)	-	-
MGP_PahariEiJ_T0043848	-	450	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043849	-	727	-	MGP_PahariEiJ_P0043849	242 (aa)	-	-
MGP_PahariEiJ_T0043851	-	927	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043850	-	815	-	-	- (aa)	-	-
MGP_PahariEiJ_T0043853	-	466	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020472	Skiv2l	76	37.006	MGP_PahariEiJ_G0015967	Mtrex	88	37.006

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020472	Skiv2l	100	92.462	ENSG00000204351	SKIV2L	98	94.944	Homo_sapiens
MGP_PahariEiJ_G0020472	Skiv2l	99	61.636	ENSAPOG00000008257	skiv2l	99	61.805	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.702	ENSAMEG00000002078	SKIV2L	100	92.702	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020472	Skiv2l	99	60.545	ENSACIG00000016719	skiv2l	99	60.533	Amphilophus_citrinellus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.557	ENSAOCG00000017352	skiv2l	99	61.644	Amphiprion_ocellaris
MGP_PahariEiJ_G0020472	Skiv2l	99	61.477	ENSAPEG00000001055	skiv2l	99	61.563	Amphiprion_percula
MGP_PahariEiJ_G0020472	Skiv2l	99	61.293	ENSATEG00000007601	skiv2l	99	61.267	Anabas_testudineus
MGP_PahariEiJ_G0020472	Skiv2l	99	65.804	ENSACAG00000011746	SKIV2L	98	66.507	Anolis_carolinensis
MGP_PahariEiJ_G0020472	Skiv2l	100	93.023	ENSANAG00000037992	SKIV2L	100	93.023	Aotus_nancymaae
MGP_PahariEiJ_G0020472	Skiv2l	99	61.844	ENSACLG00000006886	skiv2l	99	62.047	Astatotilapia_calliptera
MGP_PahariEiJ_G0020472	Skiv2l	98	59.968	ENSAMXG00000011517	skiv2l	99	59.872	Astyanax_mexicanus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.863	ENSBTAG00000005587	SKIV2L	100	92.863	Bos_taurus
MGP_PahariEiJ_G0020472	Skiv2l	95	39.219	WBGene00008502	skih-2	99	39.202	Caenorhabditis_elegans
MGP_PahariEiJ_G0020472	Skiv2l	100	92.702	ENSCJAG00000002263	SKIV2L	100	92.702	Callithrix_jacchus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.382	ENSCAFG00000000679	SKIV2L	100	92.382	Canis_familiaris
MGP_PahariEiJ_G0020472	Skiv2l	100	92.302	ENSCAFG00020000948	SKIV2L	100	92.302	Canis_lupus_dingo
MGP_PahariEiJ_G0020472	Skiv2l	100	92.863	ENSCHIG00000012897	SKIV2L	100	92.863	Capra_hircus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.542	ENSTSYG00000012133	SKIV2L	100	92.542	Carlito_syrichta
MGP_PahariEiJ_G0020472	Skiv2l	100	92.283	ENSCPOG00000001307	SKIV2L	100	92.283	Cavia_porcellus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.783	ENSCCAG00000026206	SKIV2L	100	92.783	Cebus_capucinus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.622	ENSCATG00000036901	SKIV2L	100	92.622	Cercocebus_atys
MGP_PahariEiJ_G0020472	Skiv2l	100	92.783	ENSCLAG00000007678	SKIV2L	100	92.783	Chinchilla_lanigera
MGP_PahariEiJ_G0020472	Skiv2l	100	92.462	ENSCSAG00000008988	SKIV2L	100	92.462	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020472	Skiv2l	87	64.327	ENSCPBG00000000343	SKIV2L	96	66.191	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020472	Skiv2l	94	50.888	ENSCING00000005576	-	99	50.888	Ciona_intestinalis
MGP_PahariEiJ_G0020472	Skiv2l	99	92.777	ENSCANG00000039709	SKIV2L	100	92.777	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020472	Skiv2l	100	94.775	ENSCGRG00001008385	Skiv2l	100	94.775	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020472	Skiv2l	99	61.200	ENSCSEG00000011326	skiv2l	98	61.290	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020472	Skiv2l	99	61.483	ENSCVAG00000003072	skiv2l	99	61.334	Cyprinodon_variegatus
MGP_PahariEiJ_G0020472	Skiv2l	99	60.804	ENSDARG00000062206	skiv2l	99	60.751	Danio_rerio
MGP_PahariEiJ_G0020472	Skiv2l	94	92.692	ENSDNOG00000037590	SKIV2L	100	85.508	Dasypus_novemcinctus
MGP_PahariEiJ_G0020472	Skiv2l	93	44.772	FBgn0039117	tst	97	44.857	Drosophila_melanogaster
MGP_PahariEiJ_G0020472	Skiv2l	100	75.812	ENSETEG00000009522	SKIV2L	68	92.169	Echinops_telfairi
MGP_PahariEiJ_G0020472	Skiv2l	89	56.745	ENSEBUG00000013680	-	97	56.611	Eptatretus_burgeri
MGP_PahariEiJ_G0020472	Skiv2l	93	93.632	ENSEASG00005015534	SKIV2L	99	93.632	Equus_asinus_asinus
MGP_PahariEiJ_G0020472	Skiv2l	95	92.275	ENSECAG00000021823	SKIV2L	96	92.887	Equus_caballus
MGP_PahariEiJ_G0020472	Skiv2l	93	73.359	ENSEEUG00000005049	SKIV2L	57	97.628	Erinaceus_europaeus
MGP_PahariEiJ_G0020472	Skiv2l	99	60.285	ENSELUG00000000181	skiv2l	94	66.736	Esox_lucius
MGP_PahariEiJ_G0020472	Skiv2l	100	92.943	ENSFCAG00000004519	SKIV2L	100	92.943	Felis_catus
MGP_PahariEiJ_G0020472	Skiv2l	100	90.056	ENSFDAG00000009438	SKIV2L	100	90.297	Fukomys_damarensis
MGP_PahariEiJ_G0020472	Skiv2l	99	61.538	ENSFHEG00000008853	skiv2l	99	61.736	Fundulus_heteroclitus
MGP_PahariEiJ_G0020472	Skiv2l	99	59.218	ENSGMOG00000005926	skiv2l	98	59.301	Gadus_morhua
MGP_PahariEiJ_G0020472	Skiv2l	100	40.288	ENSGALG00000035499	SKIV2L	98	61.260	Gallus_gallus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.776	ENSGAFG00000002382	skiv2l	99	61.817	Gambusia_affinis
MGP_PahariEiJ_G0020472	Skiv2l	99	60.652	ENSGACG00000002927	skiv2l	98	60.936	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.382	ENSGGOG00000002270	SKIV2L	100	92.382	Gorilla_gorilla
MGP_PahariEiJ_G0020472	Skiv2l	99	61.765	ENSHBUG00000000726	skiv2l	99	61.966	Haplochromis_burtoni
MGP_PahariEiJ_G0020472	Skiv2l	100	91.353	ENSHGLG00000016596	SKIV2L	100	91.673	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020472	Skiv2l	100	88.711	ENSHGLG00100014161	SKIV2L	100	89.031	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020472	Skiv2l	98	59.739	ENSHCOG00000007191	skiv2l	100	59.739	Hippocampus_comes
MGP_PahariEiJ_G0020472	Skiv2l	99	60.427	ENSIPUG00000016263	skiv2l	100	60.706	Ictalurus_punctatus
MGP_PahariEiJ_G0020472	Skiv2l	100	94.066	ENSSTOG00000014596	SKIV2L	100	94.066	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020472	Skiv2l	71	59.952	ENSLACG00000002986	-	73	60.553	Latimeria_chalumnae
MGP_PahariEiJ_G0020472	Skiv2l	100	91.901	ENSLAFG00000014231	SKIV2L	100	91.901	Loxodonta_africana
MGP_PahariEiJ_G0020472	Skiv2l	100	92.863	ENSMFAG00000034235	SKIV2L	100	92.863	Macaca_fascicularis
MGP_PahariEiJ_G0020472	Skiv2l	100	92.783	ENSMMUG00000000736	SKIV2L	100	92.783	Macaca_mulatta
MGP_PahariEiJ_G0020472	Skiv2l	100	92.783	ENSMNEG00000044474	SKIV2L	100	92.783	Macaca_nemestrina
MGP_PahariEiJ_G0020472	Skiv2l	100	92.622	ENSMLEG00000030512	SKIV2L	100	92.622	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.288	ENSMAMG00000002927	skiv2l	99	61.241	Mastacembelus_armatus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.685	ENSMZEG00005026415	skiv2l	99	61.886	Maylandia_zebra
MGP_PahariEiJ_G0020472	Skiv2l	70	51.688	ENSMGAG00000001320	SKIV2L	97	51.688	Meleagris_gallopavo
MGP_PahariEiJ_G0020472	Skiv2l	100	93.976	ENSMAUG00000018613	Skiv2l	100	94.217	Mesocricetus_auratus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.103	ENSMICG00000046331	SKIV2L	100	93.103	Microcebus_murinus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.248	ENSMOCG00000014240	Skiv2l	100	93.248	Microtus_ochrogaster
MGP_PahariEiJ_G0020472	Skiv2l	99	61.656	ENSMMOG00000014547	skiv2l	98	61.595	Mola_mola
MGP_PahariEiJ_G0020472	Skiv2l	100	86.800	ENSMODG00000015052	SKIV2L	100	86.800	Monodelphis_domestica
MGP_PahariEiJ_G0020472	Skiv2l	99	60.210	ENSMALG00000010535	skiv2l	98	60.277	Monopterus_albus
MGP_PahariEiJ_G0020472	Skiv2l	100	98.473	MGP_CAROLIEiJ_G0021477	Skiv2l	100	98.473	Mus_caroli
MGP_PahariEiJ_G0020472	Skiv2l	100	98.553	ENSMUSG00000040356	Skiv2l	100	98.553	Mus_musculus
MGP_PahariEiJ_G0020472	Skiv2l	100	98.151	MGP_SPRETEiJ_G0022382	Skiv2l	100	98.151	Mus_spretus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.542	ENSMPUG00000010567	SKIV2L	100	92.542	Mustela_putorius_furo
MGP_PahariEiJ_G0020472	Skiv2l	100	90.858	ENSMLUG00000000628	SKIV2L	100	90.858	Myotis_lucifugus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.151	ENSNBRG00000018650	skiv2l	98	61.228	Neolamprologus_brichardi
MGP_PahariEiJ_G0020472	Skiv2l	98	89.658	ENSNLEG00000006451	SKIV2L	99	89.739	Nomascus_leucogenys
MGP_PahariEiJ_G0020472	Skiv2l	78	92.920	ENSMEUG00000006072	SKIV2L	78	92.920	Notamacropus_eugenii
MGP_PahariEiJ_G0020472	Skiv2l	100	92.622	ENSOPRG00000003972	SKIV2L	100	92.622	Ochotona_princeps
MGP_PahariEiJ_G0020472	Skiv2l	100	91.259	ENSODEG00000017516	SKIV2L	100	91.259	Octodon_degus
MGP_PahariEiJ_G0020472	Skiv2l	99	62.480	ENSONIG00000013500	skiv2l	99	62.774	Oreochromis_niloticus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.585	ENSOCUG00000007019	SKIV2L	100	93.585	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.984	ENSORLG00000002021	skiv2l	99	62.188	Oryzias_latipes
MGP_PahariEiJ_G0020472	Skiv2l	99	61.905	ENSORLG00020009462	skiv2l	99	62.108	Oryzias_latipes_hni
MGP_PahariEiJ_G0020472	Skiv2l	99	61.746	ENSORLG00015016750	skiv2l	99	61.947	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020472	Skiv2l	99	62.848	ENSOMEG00000008531	skiv2l	99	62.500	Oryzias_melastigma
MGP_PahariEiJ_G0020472	Skiv2l	100	92.943	ENSOGAG00000009578	SKIV2L	100	92.943	Otolemur_garnettii
MGP_PahariEiJ_G0020472	Skiv2l	100	87.324	ENSOARG00000002411	-	100	87.324	Ovis_aries
MGP_PahariEiJ_G0020472	Skiv2l	74	69.302	ENSOARG00000001720	-	70	85.563	Ovis_aries
MGP_PahariEiJ_G0020472	Skiv2l	98	91.579	ENSPPAG00000040211	SKIV2L	99	91.579	Pan_paniscus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.023	ENSPPRG00000005017	SKIV2L	100	93.023	Panthera_pardus
MGP_PahariEiJ_G0020472	Skiv2l	100	92.702	ENSPTIG00000021656	SKIV2L	100	92.702	Panthera_tigris_altaica
MGP_PahariEiJ_G0020472	Skiv2l	100	92.542	ENSPTRG00000017997	SKIV2L	100	92.542	Pan_troglodytes
MGP_PahariEiJ_G0020472	Skiv2l	98	91.491	ENSPANG00000011501	SKIV2L	99	91.491	Papio_anubis
MGP_PahariEiJ_G0020472	Skiv2l	99	60.456	ENSPKIG00000011876	skiv2l	99	60.589	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020472	Skiv2l	99	60.709	ENSPMGG00000019707	skiv2l	98	61.025	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020472	Skiv2l	100	94.855	ENSPEMG00000019001	Skiv2l	100	94.855	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020472	Skiv2l	100	86.890	ENSPCIG00000018792	SKIV2L	100	86.890	Phascolarctos_cinereus
MGP_PahariEiJ_G0020472	Skiv2l	99	62.173	ENSPFOG00000002424	skiv2l	99	62.219	Poecilia_formosa
MGP_PahariEiJ_G0020472	Skiv2l	99	62.302	ENSPLAG00000018304	skiv2l	99	62.349	Poecilia_latipinna
MGP_PahariEiJ_G0020472	Skiv2l	99	62.094	ENSPMEG00000006997	skiv2l	99	62.138	Poecilia_mexicana
MGP_PahariEiJ_G0020472	Skiv2l	99	60.611	ENSPREG00000002277	skiv2l	98	60.764	Poecilia_reticulata
MGP_PahariEiJ_G0020472	Skiv2l	100	92.061	ENSPPYG00000016472	SKIV2L	100	92.061	Pongo_abelii
MGP_PahariEiJ_G0020472	Skiv2l	100	75.812	ENSPCAG00000004178	SKIV2L	77	92.811	Procavia_capensis
MGP_PahariEiJ_G0020472	Skiv2l	100	93.825	ENSPCOG00000010308	SKIV2L	100	93.825	Propithecus_coquereli
MGP_PahariEiJ_G0020472	Skiv2l	100	90.938	ENSPVAG00000005136	SKIV2L	100	90.938	Pteropus_vampyrus
MGP_PahariEiJ_G0020472	Skiv2l	99	60.016	ENSPNYG00000017853	skiv2l	97	66.770	Pundamilia_nyererei
MGP_PahariEiJ_G0020472	Skiv2l	98	61.298	ENSPNAG00000011823	skiv2l	99	61.557	Pygocentrus_nattereri
MGP_PahariEiJ_G0020472	Skiv2l	100	97.910	ENSRNOG00000000421	Skiv2l	100	97.910	Rattus_norvegicus
MGP_PahariEiJ_G0020472	Skiv2l	98	90.210	ENSRBIG00000035485	SKIV2L	99	90.210	Rhinopithecus_bieti
MGP_PahariEiJ_G0020472	Skiv2l	100	92.702	ENSRROG00000036429	SKIV2L	100	92.702	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020472	Skiv2l	94	37.910	YLR398C	-	97	37.910	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0020472	Skiv2l	100	93.103	ENSSBOG00000027920	SKIV2L	100	93.103	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020472	Skiv2l	100	86.560	ENSSHAG00000008963	SKIV2L	100	85.520	Sarcophilus_harrisii
MGP_PahariEiJ_G0020472	Skiv2l	99	61.308	ENSSFOG00015016930	skiv2l	99	61.502	Scleropages_formosus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.280	ENSSMAG00000020185	skiv2l	99	61.254	Scophthalmus_maximus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.697	ENSSDUG00000019977	skiv2l	99	61.625	Seriola_dumerili
MGP_PahariEiJ_G0020472	Skiv2l	99	60.161	ENSSLDG00000024382	skiv2l	98	60.342	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020472	Skiv2l	99	62.179	ENSSPUG00000012945	SKIV2L	98	62.243	Sphenodon_punctatus
MGP_PahariEiJ_G0020472	Skiv2l	94	61.493	ENSSPAG00000012904	skiv2l	98	61.257	Stegastes_partitus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.585	ENSSSCG00000001424	SKIV2L	100	93.585	Sus_scrofa
MGP_PahariEiJ_G0020472	Skiv2l	69	66.863	ENSTRUG00000000966	skiv2l	100	56.157	Takifugu_rubripes
MGP_PahariEiJ_G0020472	Skiv2l	99	59.968	ENSTNIG00000004382	skiv2l	98	60.307	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020472	Skiv2l	94	92.525	ENSTBEG00000003462	SKIV2L	94	92.525	Tupaia_belangeri
MGP_PahariEiJ_G0020472	Skiv2l	100	87.570	ENSTTRG00000005931	SKIV2L	100	87.570	Tursiops_truncatus
MGP_PahariEiJ_G0020472	Skiv2l	100	93.103	ENSUAMG00000024336	SKIV2L	100	93.103	Ursus_americanus
MGP_PahariEiJ_G0020472	Skiv2l	93	93.460	ENSUMAG00000012666	SKIV2L	99	93.460	Ursus_maritimus
MGP_PahariEiJ_G0020472	Skiv2l	98	92.590	ENSVVUG00000022807	SKIV2L	98	92.590	Vulpes_vulpes
MGP_PahariEiJ_G0020472	Skiv2l	100	58.539	ENSXETG00000010932	skiv2l	100	58.571	Xenopus_tropicalis
MGP_PahariEiJ_G0020472	Skiv2l	99	62.058	ENSXCOG00000019517	skiv2l	96	62.145	Xiphophorus_couchianus
MGP_PahariEiJ_G0020472	Skiv2l	99	61.380	ENSXMAG00000014079	skiv2l	99	61.415	Xiphophorus_maculatus