EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020523 (Gene tree)
Gene ID: 110335600
Gene Symbol: Vars2
Alias: 1190004I24Rik|Vars2l
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 12357 bases
Position: chr18:3591001-3603357
Accession: 110335600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0044064	tRNA-synt_1g	PF09334.11	7.4e-15	1	1
MGP_PahariEiJ_P0044064	Anticodon_1	PF08264.13	7.9e-30	1	1
MGP_PahariEiJ_P0044064	tRNA-synt_1	PF00133.22	4.4e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0044070	-	591	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044071	-	317	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044072	-	832	-	MGP_PahariEiJ_P0044072	112 (aa)	-	-
MGP_PahariEiJ_T0044073	-	730	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044074	-	618	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044075	-	783	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044069	-	721	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044068	-	1972	-	MGP_PahariEiJ_P0044068	214 (aa)	-	-
MGP_PahariEiJ_T0044067	-	2515	-	MGP_PahariEiJ_P0044067	582 (aa)	-	-
MGP_PahariEiJ_T0044066	-	3605	-	MGP_PahariEiJ_P0044066	1063 (aa)	-	-
MGP_PahariEiJ_T0044065	-	3816	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044064	-	4652	-	MGP_PahariEiJ_P0044064	1060 (aa)	XP_021073487	UPI000A30E98B
MGP_PahariEiJ_T0044076	-	715	-	MGP_PahariEiJ_P0044076	75 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020523	Vars2	92	53.028	MGP_PahariEiJ_G0020486	Vars	82	51.007

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020523	Vars2	88	64.286	ENSAPOG00000007396	vars2	97	51.280	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020523	Vars2	100	82.486	ENSAMEG00000012997	VARS2	97	82.486	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020523	Vars2	96	55.300	ENSACIG00000004344	vars2	99	50.988	Amphilophus_citrinellus
MGP_PahariEiJ_G0020523	Vars2	88	62.245	ENSAOCG00000000476	vars2	97	50.945	Amphiprion_ocellaris
MGP_PahariEiJ_G0020523	Vars2	88	62.245	ENSAPEG00000008646	vars2	95	50.945	Amphiprion_percula
MGP_PahariEiJ_G0020523	Vars2	93	57.013	ENSATEG00000012291	vars2	97	51.916	Anabas_testudineus
MGP_PahariEiJ_G0020523	Vars2	96	60.420	ENSACAG00000022093	VARS2	95	59.535	Anolis_carolinensis
MGP_PahariEiJ_G0020523	Vars2	99	83.554	ENSANAG00000038018	VARS2	99	83.554	Aotus_nancymaae
MGP_PahariEiJ_G0020523	Vars2	96	54.688	ENSACLG00000018673	vars2	98	51.210	Astatotilapia_calliptera
MGP_PahariEiJ_G0020523	Vars2	96	56.894	ENSAMXG00000017773	vars2	98	51.903	Astyanax_mexicanus
MGP_PahariEiJ_G0020523	Vars2	99	84.834	ENSBTAG00000010698	VARS2	99	84.783	Bos_taurus
MGP_PahariEiJ_G0020523	Vars2	100	83.710	ENSCJAG00000019826	VARS2	99	83.710	Callithrix_jacchus
MGP_PahariEiJ_G0020523	Vars2	100	82.015	ENSCAFG00000000454	VARS2	100	82.015	Canis_familiaris
MGP_PahariEiJ_G0020523	Vars2	95	83.848	ENSCAFG00020019387	VARS2	95	83.746	Canis_lupus_dingo
MGP_PahariEiJ_G0020523	Vars2	99	85.199	ENSCHIG00000007847	VARS2	99	85.066	Capra_hircus
MGP_PahariEiJ_G0020523	Vars2	99	84.230	ENSTSYG00000009904	VARS2	99	84.230	Carlito_syrichta
MGP_PahariEiJ_G0020523	Vars2	93	83.919	ENSCAPG00000017770	VARS2	99	82.777	Cavia_aperea
MGP_PahariEiJ_G0020523	Vars2	99	82.170	ENSCPOG00000021834	VARS2	99	82.170	Cavia_porcellus
MGP_PahariEiJ_G0020523	Vars2	99	84.310	ENSCCAG00000037907	VARS2	99	84.310	Cebus_capucinus
MGP_PahariEiJ_G0020523	Vars2	99	84.405	ENSCATG00000032554	VARS2	99	84.405	Cercocebus_atys
MGP_PahariEiJ_G0020523	Vars2	99	81.921	ENSCLAG00000002889	VARS2	99	81.921	Chinchilla_lanigera
MGP_PahariEiJ_G0020523	Vars2	99	84.216	ENSCSAG00000008327	VARS2	99	84.216	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020523	Vars2	96	62.456	ENSCPBG00000021502	VARS2	96	62.268	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020523	Vars2	99	84.310	ENSCANG00000014991	VARS2	99	84.310	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020523	Vars2	99	90.067	ENSCGRG00001021535	Vars2	100	89.906	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020523	Vars2	99	90.067	ENSCGRG00000014112	Vars2	100	89.906	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020523	Vars2	82	57.044	ENSCSEG00000015432	vars2	90	57.044	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020523	Vars2	93	56.318	ENSCVAG00000017765	vars2	98	51.836	Cyprinodon_variegatus
MGP_PahariEiJ_G0020523	Vars2	88	65.306	ENSDARG00000056717	vars2	97	52.203	Danio_rerio
MGP_PahariEiJ_G0020523	Vars2	93	86.765	ENSDORG00000008516	Vars2	93	85.493	Dipodomys_ordii
MGP_PahariEiJ_G0020523	Vars2	99	72.633	ENSETEG00000014844	VARS2	99	72.633	Echinops_telfairi
MGP_PahariEiJ_G0020523	Vars2	84	57.447	ENSEBUG00000010396	-	94	56.637	Eptatretus_burgeri
MGP_PahariEiJ_G0020523	Vars2	99	84.260	ENSEASG00005019997	VARS2	97	84.260	Equus_asinus_asinus
MGP_PahariEiJ_G0020523	Vars2	99	85.391	ENSECAG00000018202	VARS2	99	85.391	Equus_caballus
MGP_PahariEiJ_G0020523	Vars2	67	79.612	ENSEEUG00000012591	-	67	79.612	Erinaceus_europaeus
MGP_PahariEiJ_G0020523	Vars2	93	55.779	ENSELUG00000017824	vars2	97	51.831	Esox_lucius
MGP_PahariEiJ_G0020523	Vars2	100	83.427	ENSFCAG00000010531	VARS2	100	83.427	Felis_catus
MGP_PahariEiJ_G0020523	Vars2	99	82.580	ENSFDAG00000017216	VARS2	99	82.580	Fukomys_damarensis
MGP_PahariEiJ_G0020523	Vars2	93	52.764	ENSFHEG00000013932	vars2	92	51.757	Fundulus_heteroclitus
MGP_PahariEiJ_G0020523	Vars2	93	56.985	ENSGMOG00000018960	vars2	99	55.731	Gadus_morhua
MGP_PahariEiJ_G0020523	Vars2	93	55.476	ENSGAFG00000004737	vars2	89	50.816	Gambusia_affinis
MGP_PahariEiJ_G0020523	Vars2	88	63.265	ENSGACG00000001464	vars2	99	53.503	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020523	Vars2	96	63.604	ENSGAGG00000011652	VARS2	99	61.499	Gopherus_agassizii
MGP_PahariEiJ_G0020523	Vars2	99	84.405	ENSGGOG00000014587	VARS2	99	84.405	Gorilla_gorilla
MGP_PahariEiJ_G0020523	Vars2	96	53.913	ENSHBUG00000002448	vars2	99	49.254	Haplochromis_burtoni
MGP_PahariEiJ_G0020523	Vars2	99	81.733	ENSHGLG00000012886	VARS2	96	81.733	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020523	Vars2	99	81.544	ENSHGLG00100016535	VARS2	99	81.544	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020523	Vars2	93	56.703	ENSHCOG00000017907	vars2	94	52.045	Hippocampus_comes
MGP_PahariEiJ_G0020523	Vars2	93	58.577	ENSIPUG00000015573	Vars2	98	53.002	Ictalurus_punctatus
MGP_PahariEiJ_G0020523	Vars2	99	86.038	ENSSTOG00000009924	VARS2	99	86.038	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020523	Vars2	99	83.192	ENSJJAG00000011144	Vars2	99	83.192	Jaculus_jaculus
MGP_PahariEiJ_G0020523	Vars2	93	55.516	ENSKMAG00000001393	vars2	96	51.141	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020523	Vars2	83	64.516	ENSLBEG00000005480	-	81	62.681	Labrus_bergylta
MGP_PahariEiJ_G0020523	Vars2	93	55.776	ENSLBEG00000011949	vars2	97	50.282	Labrus_bergylta
MGP_PahariEiJ_G0020523	Vars2	96	59.541	ENSLACG00000001576	-	99	52.233	Latimeria_chalumnae
MGP_PahariEiJ_G0020523	Vars2	99	82.860	ENSLAFG00000015183	VARS2	99	82.860	Loxodonta_africana
MGP_PahariEiJ_G0020523	Vars2	99	84.216	ENSMFAG00000042367	VARS2	99	84.216	Macaca_fascicularis
MGP_PahariEiJ_G0020523	Vars2	99	84.216	ENSMMUG00000018609	VARS2	99	84.216	Macaca_mulatta
MGP_PahariEiJ_G0020523	Vars2	99	84.216	ENSMNEG00000043163	VARS2	99	84.216	Macaca_nemestrina
MGP_PahariEiJ_G0020523	Vars2	99	84.499	ENSMLEG00000041728	VARS2	97	84.499	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020523	Vars2	93	54.219	ENSMAMG00000020339	vars2	98	50.000	Mastacembelus_armatus
MGP_PahariEiJ_G0020523	Vars2	96	54.514	ENSMZEG00005017669	vars2	98	51.117	Maylandia_zebra
MGP_PahariEiJ_G0020523	Vars2	63	59.730	ENSMGAG00000008005	-	100	57.005	Meleagris_gallopavo
MGP_PahariEiJ_G0020523	Vars2	100	89.821	ENSMAUG00000018946	Vars2	100	89.821	Mesocricetus_auratus
MGP_PahariEiJ_G0020523	Vars2	93	85.930	ENSMICG00000005365	VARS2	100	86.211	Microcebus_murinus
MGP_PahariEiJ_G0020523	Vars2	94	92.364	ENSMOCG00000014607	Vars2	100	92.364	Microtus_ochrogaster
MGP_PahariEiJ_G0020523	Vars2	93	57.195	ENSMMOG00000012122	vars2	98	51.229	Mola_mola
MGP_PahariEiJ_G0020523	Vars2	99	74.835	ENSMODG00000015848	VARS2	99	74.835	Monodelphis_domestica
MGP_PahariEiJ_G0020523	Vars2	96	56.338	ENSMALG00000009217	vars2	99	53.227	Monopterus_albus
MGP_PahariEiJ_G0020523	Vars2	100	98.214	MGP_CAROLIEiJ_G0021529	Vars2	100	98.214	Mus_caroli
MGP_PahariEiJ_G0020523	Vars2	100	98.214	ENSMUSG00000038838	Vars2	100	98.214	Mus_musculus
MGP_PahariEiJ_G0020523	Vars2	100	98.214	MGP_SPRETEiJ_G0022436	Vars2	100	98.214	Mus_spretus
MGP_PahariEiJ_G0020523	Vars2	100	82.674	ENSMPUG00000011643	VARS2	100	82.674	Mustela_putorius_furo
MGP_PahariEiJ_G0020523	Vars2	99	81.046	ENSMLUG00000002356	VARS2	97	81.046	Myotis_lucifugus
MGP_PahariEiJ_G0020523	Vars2	90	94.059	ENSNGAG00000020607	Vars2	100	79.174	Nannospalax_galili
MGP_PahariEiJ_G0020523	Vars2	60	48.209	ENSNBRG00000001624	vars2	57	48.760	Neolamprologus_brichardi
MGP_PahariEiJ_G0020523	Vars2	99	80.682	ENSNLEG00000005625	VARS2	97	80.682	Nomascus_leucogenys
MGP_PahariEiJ_G0020523	Vars2	76	76.812	ENSMEUG00000014475	VARS2	89	74.457	Notamacropus_eugenii
MGP_PahariEiJ_G0020523	Vars2	85	87.368	ENSOPRG00000000682	VARS2	90	80.973	Ochotona_princeps
MGP_PahariEiJ_G0020523	Vars2	99	80.885	ENSODEG00000017965	VARS2	99	80.885	Octodon_degus
MGP_PahariEiJ_G0020523	Vars2	66	59.169	ENSONIG00000004734	vars2	73	56.492	Oreochromis_niloticus
MGP_PahariEiJ_G0020523	Vars2	93	74.242	ENSOANG00000000398	-	98	85.294	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020523	Vars2	93	83.417	ENSOCUG00000021496	VARS2	64	77.612	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020523	Vars2	96	54.688	ENSORLG00000010632	vars2	94	51.852	Oryzias_latipes
MGP_PahariEiJ_G0020523	Vars2	96	54.688	ENSORLG00020018584	vars2	97	50.752	Oryzias_latipes_hni
MGP_PahariEiJ_G0020523	Vars2	96	54.514	ENSORLG00015010408	vars2	96	50.856	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020523	Vars2	96	55.035	ENSOMEG00000008360	vars2	93	52.775	Oryzias_melastigma
MGP_PahariEiJ_G0020523	Vars2	99	84.340	ENSOGAG00000006087	VARS2	97	84.340	Otolemur_garnettii
MGP_PahariEiJ_G0020523	Vars2	99	83.886	ENSOARG00000010844	VARS2	98	83.758	Ovis_aries
MGP_PahariEiJ_G0020523	Vars2	99	84.121	ENSPPAG00000041141	VARS2	99	84.121	Pan_paniscus
MGP_PahariEiJ_G0020523	Vars2	100	82.863	ENSPPRG00000006751	VARS2	97	82.863	Panthera_pardus
MGP_PahariEiJ_G0020523	Vars2	100	82.768	ENSPTIG00000017799	VARS2	98	83.903	Panthera_tigris_altaica
MGP_PahariEiJ_G0020523	Vars2	99	84.121	ENSPTRG00000034497	VARS2	99	84.121	Pan_troglodytes
MGP_PahariEiJ_G0020523	Vars2	99	84.405	ENSPANG00000018481	VARS2	100	84.511	Papio_anubis
MGP_PahariEiJ_G0020523	Vars2	96	57.420	ENSPKIG00000011372	vars2	98	53.883	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020523	Vars2	93	61.275	ENSPSIG00000006206	VARS2	92	66.358	Pelodiscus_sinensis
MGP_PahariEiJ_G0020523	Vars2	88	65.306	ENSPMGG00000000465	vars2	98	52.358	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020523	Vars2	100	91.792	ENSPEMG00000014691	Vars2	100	91.792	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020523	Vars2	99	76.465	ENSPCIG00000015040	VARS2	99	76.465	Phascolarctos_cinereus
MGP_PahariEiJ_G0020523	Vars2	93	56.159	ENSPFOG00000017616	vars2	95	51.848	Poecilia_formosa
MGP_PahariEiJ_G0020523	Vars2	93	55.315	ENSPLAG00000019778	vars2	96	51.406	Poecilia_latipinna
MGP_PahariEiJ_G0020523	Vars2	93	55.495	ENSPMEG00000011123	vars2	95	51.503	Poecilia_mexicana
MGP_PahariEiJ_G0020523	Vars2	92	55.292	ENSPREG00000014998	vars2	94	47.316	Poecilia_reticulata
MGP_PahariEiJ_G0020523	Vars2	99	84.230	ENSPPYG00000016424	VARS2	99	84.230	Pongo_abelii
MGP_PahariEiJ_G0020523	Vars2	93	71.859	ENSPCAG00000006946	VARS2	84	77.462	Procavia_capensis
MGP_PahariEiJ_G0020523	Vars2	99	83.411	ENSPCOG00000014839	VARS2	97	83.411	Propithecus_coquereli
MGP_PahariEiJ_G0020523	Vars2	99	82.514	ENSPVAG00000004197	VARS2	99	82.514	Pteropus_vampyrus
MGP_PahariEiJ_G0020523	Vars2	82	59.409	ENSPNYG00000010314	vars2	100	59.409	Pundamilia_nyererei
MGP_PahariEiJ_G0020523	Vars2	93	58.590	ENSPNAG00000026793	vars2	97	53.035	Pygocentrus_nattereri
MGP_PahariEiJ_G0020523	Vars2	100	94.434	ENSRNOG00000000833	Vars2	100	94.434	Rattus_norvegicus
MGP_PahariEiJ_G0020523	Vars2	99	84.121	ENSRBIG00000032725	VARS2	99	84.121	Rhinopithecus_bieti
MGP_PahariEiJ_G0020523	Vars2	99	84.121	ENSRROG00000043847	VARS2	99	84.121	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020523	Vars2	99	81.852	ENSSBOG00000033240	VARS2	97	81.852	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020523	Vars2	99	75.425	ENSSHAG00000009307	VARS2	100	75.425	Sarcophilus_harrisii
MGP_PahariEiJ_G0020523	Vars2	96	57.168	ENSSFOG00015016187	vars2	98	52.656	Scleropages_formosus
MGP_PahariEiJ_G0020523	Vars2	95	56.429	ENSSMAG00000020842	vars2	97	52.596	Scophthalmus_maximus
MGP_PahariEiJ_G0020523	Vars2	93	56.607	ENSSDUG00000011598	vars2	98	51.507	Seriola_dumerili
MGP_PahariEiJ_G0020523	Vars2	93	57.038	ENSSLDG00000015492	vars2	97	51.052	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020523	Vars2	57	85.401	ENSSARG00000003786	-	69	85.401	Sorex_araneus
MGP_PahariEiJ_G0020523	Vars2	96	60.498	ENSSPUG00000014700	VARS2	94	59.168	Sphenodon_punctatus
MGP_PahariEiJ_G0020523	Vars2	93	54.396	ENSSPAG00000004654	vars2	97	48.948	Stegastes_partitus
MGP_PahariEiJ_G0020523	Vars2	100	84.369	ENSSSCG00000001384	VARS2	100	84.369	Sus_scrofa
MGP_PahariEiJ_G0020523	Vars2	99	55.822	ENSTRUG00000005264	vars2	95	53.181	Takifugu_rubripes
MGP_PahariEiJ_G0020523	Vars2	93	56.960	ENSTNIG00000005916	vars2	95	52.427	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020523	Vars2	52	88.060	ENSTBEG00000007976	-	52	88.060	Tupaia_belangeri
MGP_PahariEiJ_G0020523	Vars2	93	84.685	ENSTTRG00000012243	VARS2	93	84.685	Tursiops_truncatus
MGP_PahariEiJ_G0020523	Vars2	100	82.408	ENSUAMG00000026124	VARS2	100	83.948	Ursus_americanus
MGP_PahariEiJ_G0020523	Vars2	100	83.145	ENSUMAG00000019894	VARS2	100	83.145	Ursus_maritimus
MGP_PahariEiJ_G0020523	Vars2	70	85.897	ENSVPAG00000003703	-	64	92.857	Vicugna_pacos
MGP_PahariEiJ_G0020523	Vars2	100	82.392	ENSVVUG00000010754	VARS2	95	82.392	Vulpes_vulpes
MGP_PahariEiJ_G0020523	Vars2	89	63.000	ENSXETG00000003036	vars2	99	55.079	Xenopus_tropicalis
MGP_PahariEiJ_G0020523	Vars2	93	57.143	ENSXCOG00000003455	vars2	96	52.900	Xiphophorus_couchianus
MGP_PahariEiJ_G0020523	Vars2	93	55.655	ENSXMAG00000013523	vars2	97	50.951	Xiphophorus_maculatus