EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020538 (Gene tree)
Gene ID: 110335516
Gene Symbol: Prr3
Alias: 4930540G07Rik|CAT56
Full Name: proline rich 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 7114 bases
Position: chr18:3909409-3916522
Accession: 110335516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0044180	zf-CCCH	PF00642.24	3.1e-05	1	1
MGP_PahariEiJ_P0044181	zf-CCCH	PF00642.24	3.1e-05	1	1
MGP_PahariEiJ_P0044179	zf-CCCH	PF00642.24	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0044179	-	2552	XM_021217676	MGP_PahariEiJ_P0044179	188 (aa)	XP_021073335	-
MGP_PahariEiJ_T0044180	-	1850	XM_021217678	MGP_PahariEiJ_P0044180	143 (aa)	XP_021073337	UPI000A30706C
MGP_PahariEiJ_T0044181	-	760	-	MGP_PahariEiJ_P0044181	143 (aa)	XP_021073339	UPI000A30706C
MGP_PahariEiJ_T0044182	-	416	-	MGP_PahariEiJ_P0044182	74 (aa)	-	-
MGP_PahariEiJ_T0044183	-	689	-	MGP_PahariEiJ_P0044183	86 (aa)	-	-
MGP_PahariEiJ_T0044184	-	368	-	MGP_PahariEiJ_P0044184	86 (aa)	-	-
MGP_PahariEiJ_T0044185	-	532	-	MGP_PahariEiJ_P0044185	99 (aa)	-	-
MGP_PahariEiJ_T0044186	-	412	-	MGP_PahariEiJ_P0044186	43 (aa)	-	-
MGP_PahariEiJ_T0044187	-	418	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSG00000204576	PRR3	100	80.319	Homo_sapiens
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSAMEG00000013405	PRR3	83	82.447	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020538	Prr3	100	85.315	ENSANAG00000021850	PRR3	100	81.915	Aotus_nancymaae
MGP_PahariEiJ_G0020538	Prr3	100	86.713	ENSBTAG00000006914	PRR3	100	82.447	Bos_taurus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSCJAG00000039422	PRR3	100	81.383	Callithrix_jacchus
MGP_PahariEiJ_G0020538	Prr3	100	85.315	ENSCAFG00000015158	-	100	81.915	Canis_familiaris
MGP_PahariEiJ_G0020538	Prr3	100	79.452	ENSCAFG00020016031	-	100	77.487	Canis_lupus_dingo
MGP_PahariEiJ_G0020538	Prr3	100	83.562	ENSCAFG00020015606	-	100	80.628	Canis_lupus_dingo
MGP_PahariEiJ_G0020538	Prr3	100	86.713	ENSCHIG00000023414	PRR3	100	86.713	Capra_hircus
MGP_PahariEiJ_G0020538	Prr3	100	80.420	ENSTSYG00000000166	PRR3	100	77.660	Carlito_syrichta
MGP_PahariEiJ_G0020538	Prr3	92	80.916	ENSCAPG00000005995	PRR3	100	80.916	Cavia_aperea
MGP_PahariEiJ_G0020538	Prr3	100	80.420	ENSCPOG00000040772	PRR3	100	80.420	Cavia_porcellus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSCCAG00000032612	PRR3	100	82.447	Cebus_capucinus
MGP_PahariEiJ_G0020538	Prr3	100	83.916	ENSCATG00000043741	PRR3	100	80.319	Cercocebus_atys
MGP_PahariEiJ_G0020538	Prr3	100	83.217	ENSCLAG00000003296	PRR3	94	83.217	Chinchilla_lanigera
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSCSAG00000008206	PRR3	100	80.319	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSCANG00000043540	PRR3	100	69.681	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020538	Prr3	100	82.517	ENSCGRG00001000806	Prr3	100	76.650	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020538	Prr3	100	82.517	ENSCGRG00000013074	Prr3	100	79.365	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020538	Prr3	100	87.413	ENSDORG00000027875	Prr3	100	83.158	Dipodomys_ordii
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSEASG00005018612	PRR3	100	71.277	Equus_asinus_asinus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSECAG00000035688	PRR3	100	71.809	Equus_caballus
MGP_PahariEiJ_G0020538	Prr3	92	81.679	ENSEEUG00000006243	PRR3	77	69.149	Erinaceus_europaeus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSFCAG00000025918	PRR3	100	80.851	Felis_catus
MGP_PahariEiJ_G0020538	Prr3	100	83.916	ENSGGOG00000014604	-	100	69.149	Gorilla_gorilla
MGP_PahariEiJ_G0020538	Prr3	100	81.818	ENSHGLG00000017179	PRR3	100	81.818	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020538	Prr3	100	81.818	ENSHGLG00100015907	PRR3	100	81.818	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020538	Prr3	100	86.713	ENSSTOG00000011829	PRR3	100	82.447	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSJJAG00000010607	Prr3	100	80.952	Jaculus_jaculus
MGP_PahariEiJ_G0020538	Prr3	100	83.217	ENSLAFG00000017245	PRR3	100	77.660	Loxodonta_africana
MGP_PahariEiJ_G0020538	Prr3	100	83.916	ENSMFAG00000045525	PRR3	100	80.319	Macaca_fascicularis
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSMMUG00000013893	PRR3	76	80.851	Macaca_mulatta
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSMNEG00000030018	PRR3	100	69.681	Macaca_nemestrina
MGP_PahariEiJ_G0020538	Prr3	100	83.217	ENSMLEG00000035986	PRR3	100	79.787	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020538	Prr3	100	87.413	ENSMAUG00000012487	Prr3	100	81.443	Mesocricetus_auratus
MGP_PahariEiJ_G0020538	Prr3	100	82.517	ENSMICG00000042955	PRR3	100	77.660	Microcebus_murinus
MGP_PahariEiJ_G0020538	Prr3	100	90.210	ENSMOCG00000014183	Prr3	100	85.638	Microtus_ochrogaster
MGP_PahariEiJ_G0020538	Prr3	100	98.601	MGP_CAROLIEiJ_G0021546	Prr3	100	98.601	Mus_caroli
MGP_PahariEiJ_G0020538	Prr3	100	97.203	ENSMUSG00000038500	Prr3	100	97.203	Mus_musculus
MGP_PahariEiJ_G0020538	Prr3	100	97.203	MGP_SPRETEiJ_G0022451	Prr3	100	93.158	Mus_spretus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSMPUG00000011797	PRR3	90	82.447	Mustela_putorius_furo
MGP_PahariEiJ_G0020538	Prr3	100	74.126	ENSMLUG00000008758	PRR3	100	71.809	Myotis_lucifugus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSNGAG00000004281	Prr3	100	86.014	Nannospalax_galili
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSNLEG00000029816	-	100	80.851	Nomascus_leucogenys
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSOPRG00000000008	PRR3	100	80.851	Ochotona_princeps
MGP_PahariEiJ_G0020538	Prr3	100	79.021	ENSODEG00000017937	PRR3	100	79.021	Octodon_degus
MGP_PahariEiJ_G0020538	Prr3	100	87.413	ENSOCUG00000002117	PRR3	76	82.447	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSOGAG00000004430	PRR3	100	80.423	Otolemur_garnettii
MGP_PahariEiJ_G0020538	Prr3	100	86.713	ENSOARG00000013225	PRR3	76	82.447	Ovis_aries
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSPPAG00000043578	-	100	69.681	Pan_paniscus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSPPRG00000006562	-	100	80.851	Panthera_pardus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSPTIG00000010192	-	100	80.851	Panthera_tigris_altaica
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSPTRG00000043143	PRR3	100	71.809	Pan_troglodytes
MGP_PahariEiJ_G0020538	Prr3	100	88.811	ENSPEMG00000001275	Prr3	100	88.811	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020538	Prr3	100	83.916	ENSPPYG00000016409	PRR3	100	80.319	Pongo_abelii
MGP_PahariEiJ_G0020538	Prr3	75	81.308	ENSPCAG00000004585	PRR3	57	81.308	Procavia_capensis
MGP_PahariEiJ_G0020538	Prr3	100	85.315	ENSPCOG00000018694	PRR3	100	81.383	Propithecus_coquereli
MGP_PahariEiJ_G0020538	Prr3	94	81.481	ENSPVAG00000003972	PRR3	100	77.222	Pteropus_vampyrus
MGP_PahariEiJ_G0020538	Prr3	100	91.608	ENSRNOG00000025806	Prr3	100	88.830	Rattus_norvegicus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSRBIG00000007355	PRR3	100	80.851	Rhinopithecus_bieti
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSRROG00000034036	PRR3	100	80.851	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSSBOG00000026415	PRR3	100	81.915	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020538	Prr3	100	82.517	ENSSARG00000006048	-	97	79.255	Sorex_araneus
MGP_PahariEiJ_G0020538	Prr3	100	82.517	ENSSARG00000002747	-	76	79.255	Sorex_araneus
MGP_PahariEiJ_G0020538	Prr3	100	84.615	ENSSSCG00000025892	PRR3	88	84.615	Sus_scrofa
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSTTRG00000008296	PRR3	100	81.383	Tursiops_truncatus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSUAMG00000007669	PRR3	100	82.447	Ursus_americanus
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSUMAG00000018945	PRR3	100	82.447	Ursus_maritimus
MGP_PahariEiJ_G0020538	Prr3	100	62.234	ENSVPAG00000011471	PRR3	100	62.234	Vicugna_pacos
MGP_PahariEiJ_G0020538	Prr3	100	86.014	ENSVVUG00000009563	-	100	86.014	Vulpes_vulpes