EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020648 (Gene tree)
Gene ID: 110335816
Gene Symbol: Mrps18a
Alias: 1110004O20Rik
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 17320 bases
Position: chr18:13706894-13724213
Accession: 110335816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0044462	Ribosomal_S18	PF01084.20	5.9e-16	1	1
MGP_PahariEiJ_P0044460	Ribosomal_S18	PF01084.20	8.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0044462	-	601	-	MGP_PahariEiJ_P0044462	149 (aa)	-	-
MGP_PahariEiJ_T0044461	-	577	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044460	-	883	XM_021218188	MGP_PahariEiJ_P0044460	196 (aa)	XP_021073847	UPI000A30E166
MGP_PahariEiJ_T0044466	-	527	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044465	-	2182	-	-	- (aa)	-	-
MGP_PahariEiJ_T0044464	-	900	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0020648	Mrps18a	87	32.331	MGP_PahariEiJ_G0017236	Mrps18c	85	32.331

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020648	Mrps18a	100	81.879	ENSG00000096080	MRPS18A	99	82.540	Homo_sapiens
MGP_PahariEiJ_G0020648	Mrps18a	100	79.592	ENSAMEG00000012117	MRPS18A	100	79.592	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020648	Mrps18a	86	63.529	ENSACIG00000017782	mrps18a	81	63.529	Amphilophus_citrinellus
MGP_PahariEiJ_G0020648	Mrps18a	66	64.646	ENSAOCG00000005723	mrps18a	58	64.646	Amphiprion_ocellaris
MGP_PahariEiJ_G0020648	Mrps18a	86	62.353	ENSAPEG00000006971	mrps18a	81	62.353	Amphiprion_percula
MGP_PahariEiJ_G0020648	Mrps18a	86	65.089	ENSATEG00000003132	mrps18a	81	65.089	Anabas_testudineus
MGP_PahariEiJ_G0020648	Mrps18a	81	71.069	ENSAPLG00000016280	MRPS18A	100	71.069	Anas_platyrhynchos
MGP_PahariEiJ_G0020648	Mrps18a	100	67.114	ENSACAG00000000642	MRPS18A	100	63.776	Anolis_carolinensis
MGP_PahariEiJ_G0020648	Mrps18a	100	80.612	ENSANAG00000030889	MRPS18A	100	80.612	Aotus_nancymaae
MGP_PahariEiJ_G0020648	Mrps18a	100	58.000	ENSACLG00000008170	mrps18a	99	56.842	Astatotilapia_calliptera
MGP_PahariEiJ_G0020648	Mrps18a	58	62.609	ENSAMXG00000036055	-	85	62.609	Astyanax_mexicanus
MGP_PahariEiJ_G0020648	Mrps18a	86	61.538	ENSAMXG00000036348	mrps18a	84	57.062	Astyanax_mexicanus
MGP_PahariEiJ_G0020648	Mrps18a	100	79.195	ENSBTAG00000025571	MRPS18A	100	79.082	Bos_taurus
MGP_PahariEiJ_G0020648	Mrps18a	87	31.061	WBGene00022583	mrps-18A	70	31.061	Caenorhabditis_elegans
MGP_PahariEiJ_G0020648	Mrps18a	100	80.102	ENSCJAG00000017382	MRPS18A	100	80.102	Callithrix_jacchus
MGP_PahariEiJ_G0020648	Mrps18a	100	78.571	ENSCAFG00000001928	MRPS18A	100	78.571	Canis_familiaris
MGP_PahariEiJ_G0020648	Mrps18a	100	78.061	ENSCAFG00020012064	MRPS18A	83	78.061	Canis_lupus_dingo
MGP_PahariEiJ_G0020648	Mrps18a	100	79.866	ENSCHIG00000013039	MRPS18A	100	79.592	Capra_hircus
MGP_PahariEiJ_G0020648	Mrps18a	100	80.102	ENSTSYG00000001390	MRPS18A	100	80.102	Carlito_syrichta
MGP_PahariEiJ_G0020648	Mrps18a	76	85.135	ENSCAPG00000016029	MRPS18A	91	85.135	Cavia_aperea
MGP_PahariEiJ_G0020648	Mrps18a	100	78.523	ENSCPOG00000022949	MRPS18A	96	81.383	Cavia_porcellus
MGP_PahariEiJ_G0020648	Mrps18a	100	81.879	ENSCCAG00000021108	MRPS18A	100	81.122	Cebus_capucinus
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSCATG00000012963	MRPS18A	100	79.082	Cercocebus_atys
MGP_PahariEiJ_G0020648	Mrps18a	100	78.571	ENSCLAG00000012929	MRPS18A	100	78.571	Chinchilla_lanigera
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSCSAG00000012127	MRPS18A	100	79.082	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020648	Mrps18a	100	65.772	ENSCPBG00000025243	MRPS18A	100	61.735	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020648	Mrps18a	83	38.690	ENSCING00000024771	-	83	38.690	Ciona_intestinalis
MGP_PahariEiJ_G0020648	Mrps18a	87	37.778	ENSCSAVG00000009539	-	90	38.788	Ciona_savignyi
MGP_PahariEiJ_G0020648	Mrps18a	100	79.866	ENSCANG00000039873	MRPS18A	99	80.159	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020648	Mrps18a	89	87.970	ENSCGRG00001017882	Mrps18a	97	82.778	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020648	Mrps18a	100	63.087	ENSCGRG00000000079	Mrps18a	100	65.263	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020648	Mrps18a	86	61.176	ENSCSEG00000019650	mrps18a	81	62.573	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020648	Mrps18a	84	65.663	ENSCVAG00000006511	mrps18a	79	65.663	Cyprinodon_variegatus
MGP_PahariEiJ_G0020648	Mrps18a	85	61.905	ENSDARG00000024465	mrps18a	80	62.500	Danio_rerio
MGP_PahariEiJ_G0020648	Mrps18a	100	79.866	ENSDNOG00000035755	MRPS18A	99	78.571	Dasypus_novemcinctus
MGP_PahariEiJ_G0020648	Mrps18a	100	85.235	ENSDORG00000014583	Mrps18a	100	82.653	Dipodomys_ordii
MGP_PahariEiJ_G0020648	Mrps18a	90	36.765	FBgn0051450	mRpS18A	83	36.765	Drosophila_melanogaster
MGP_PahariEiJ_G0020648	Mrps18a	76	65.946	ENSETEG00000014171	MRPS18A	100	65.946	Echinops_telfairi
MGP_PahariEiJ_G0020648	Mrps18a	100	78.523	ENSEASG00005003485	MRPS18A	63	79.651	Equus_asinus_asinus
MGP_PahariEiJ_G0020648	Mrps18a	100	77.852	ENSECAG00000004870	MRPS18A	63	78.488	Equus_caballus
MGP_PahariEiJ_G0020648	Mrps18a	100	56.954	ENSELUG00000005253	mrps18a	94	56.061	Esox_lucius
MGP_PahariEiJ_G0020648	Mrps18a	100	78.571	ENSFCAG00000036031	MRPS18A	100	78.571	Felis_catus
MGP_PahariEiJ_G0020648	Mrps18a	100	66.443	ENSFALG00000011356	MRPS18A	100	64.286	Ficedula_albicollis
MGP_PahariEiJ_G0020648	Mrps18a	100	77.181	ENSFDAG00000012875	MRPS18A	87	77.457	Fukomys_damarensis
MGP_PahariEiJ_G0020648	Mrps18a	83	64.024	ENSFHEG00000009014	mrps18a	78	64.024	Fundulus_heteroclitus
MGP_PahariEiJ_G0020648	Mrps18a	100	51.634	ENSGMOG00000012493	mrps18a	97	53.500	Gadus_morhua
MGP_PahariEiJ_G0020648	Mrps18a	97	69.444	ENSGALG00000010296	MRPS18A	97	69.444	Gallus_gallus
MGP_PahariEiJ_G0020648	Mrps18a	84	66.867	ENSGAFG00000005211	mrps18a	88	63.636	Gambusia_affinis
MGP_PahariEiJ_G0020648	Mrps18a	85	58.333	ENSGACG00000013370	mrps18a	82	60.714	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020648	Mrps18a	68	78.218	ENSGAGG00000017954	MRPS18A	79	68.243	Gopherus_agassizii
MGP_PahariEiJ_G0020648	Mrps18a	100	81.208	ENSGGOG00000006303	-	99	81.746	Gorilla_gorilla
MGP_PahariEiJ_G0020648	Mrps18a	100	58.000	ENSHBUG00000014682	mrps18a	94	57.868	Haplochromis_burtoni
MGP_PahariEiJ_G0020648	Mrps18a	100	76.531	ENSHGLG00000014356	MRPS18A	100	76.531	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020648	Mrps18a	100	76.531	ENSHGLG00100010988	MRPS18A	100	76.531	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020648	Mrps18a	84	66.463	ENSHCOG00000000856	mrps18a	79	66.463	Hippocampus_comes
MGP_PahariEiJ_G0020648	Mrps18a	91	61.878	ENSIPUG00000017406	mrps18a	87	62.431	Ictalurus_punctatus
MGP_PahariEiJ_G0020648	Mrps18a	100	77.852	ENSSTOG00000004490	MRPS18A	100	75.728	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020648	Mrps18a	100	81.633	ENSJJAG00000006567	Mrps18a	100	81.633	Jaculus_jaculus
MGP_PahariEiJ_G0020648	Mrps18a	86	64.118	ENSKMAG00000014910	mrps18a	81	64.118	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020648	Mrps18a	86	64.943	ENSLBEG00000003391	mrps18a	83	64.943	Labrus_bergylta
MGP_PahariEiJ_G0020648	Mrps18a	91	46.667	ENSLACG00000022160	mrps18a	84	46.667	Latimeria_chalumnae
MGP_PahariEiJ_G0020648	Mrps18a	91	67.647	ENSLOCG00000016008	mrps18a	87	63.388	Lepisosteus_oculatus
MGP_PahariEiJ_G0020648	Mrps18a	100	76.650	ENSLAFG00000001168	MRPS18A	100	76.650	Loxodonta_africana
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSMFAG00000038311	MRPS18A	100	79.082	Macaca_fascicularis
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSMMUG00000014749	MRPS18A	100	79.082	Macaca_mulatta
MGP_PahariEiJ_G0020648	Mrps18a	100	78.571	ENSMNEG00000044642	MRPS18A	100	78.571	Macaca_nemestrina
MGP_PahariEiJ_G0020648	Mrps18a	81	82.911	ENSMLEG00000041828	MRPS18A	100	82.911	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020648	Mrps18a	86	61.765	ENSMAMG00000015478	mrps18a	81	64.118	Mastacembelus_armatus
MGP_PahariEiJ_G0020648	Mrps18a	100	58.000	ENSMZEG00005014925	mrps18a	99	56.842	Maylandia_zebra
MGP_PahariEiJ_G0020648	Mrps18a	97	69.444	ENSMGAG00000010915	MRPS18A	98	65.969	Meleagris_gallopavo
MGP_PahariEiJ_G0020648	Mrps18a	100	78.571	ENSMICG00000005062	MRPS18A	100	78.571	Microcebus_murinus
MGP_PahariEiJ_G0020648	Mrps18a	100	83.163	ENSMOCG00000015168	-	100	83.163	Microtus_ochrogaster
MGP_PahariEiJ_G0020648	Mrps18a	100	88.265	ENSMOCG00000021207	-	100	88.265	Microtus_ochrogaster
MGP_PahariEiJ_G0020648	Mrps18a	52	67.949	ENSMMOG00000015315	mrps18a	60	67.949	Mola_mola
MGP_PahariEiJ_G0020648	Mrps18a	86	62.353	ENSMMOG00000015248	mrps18a	82	62.353	Mola_mola
MGP_PahariEiJ_G0020648	Mrps18a	100	64.017	ENSMODG00000018952	MRPS18A	100	64.017	Monodelphis_domestica
MGP_PahariEiJ_G0020648	Mrps18a	98	57.513	ENSMALG00000017044	mrps18a	98	57.513	Monopterus_albus
MGP_PahariEiJ_G0020648	Mrps18a	100	97.449	MGP_CAROLIEiJ_G0021656	Mrps18a	100	97.449	Mus_caroli
MGP_PahariEiJ_G0020648	Mrps18a	100	96.939	ENSMUSG00000023967	Mrps18a	100	96.939	Mus_musculus
MGP_PahariEiJ_G0020648	Mrps18a	100	96.939	MGP_SPRETEiJ_G0022568	Mrps18a	100	96.939	Mus_spretus
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSMPUG00000012868	MRPS18A	83	79.082	Mustela_putorius_furo
MGP_PahariEiJ_G0020648	Mrps18a	100	80.537	ENSMLUG00000017755	MRPS18A	100	80.102	Myotis_lucifugus
MGP_PahariEiJ_G0020648	Mrps18a	100	83.673	ENSNGAG00000020052	Mrps18a	100	83.673	Nannospalax_galili
MGP_PahariEiJ_G0020648	Mrps18a	86	63.529	ENSNBRG00000021152	mrps18a	81	63.529	Neolamprologus_brichardi
MGP_PahariEiJ_G0020648	Mrps18a	100	81.879	ENSNLEG00000003865	MRPS18A	99	82.540	Nomascus_leucogenys
MGP_PahariEiJ_G0020648	Mrps18a	100	62.651	ENSMEUG00000013986	MRPS18A	100	62.249	Notamacropus_eugenii
MGP_PahariEiJ_G0020648	Mrps18a	100	81.395	ENSOPRG00000007680	MRPS18A	100	59.533	Ochotona_princeps
MGP_PahariEiJ_G0020648	Mrps18a	100	75.168	ENSODEG00000015388	MRPS18A	100	74.490	Octodon_degus
MGP_PahariEiJ_G0020648	Mrps18a	100	58.000	ENSONIG00000000609	mrps18a	94	57.868	Oreochromis_niloticus
MGP_PahariEiJ_G0020648	Mrps18a	79	81.290	ENSOANG00000001955	MRPS18A	97	81.290	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020648	Mrps18a	100	82.550	ENSOCUG00000005544	MRPS18A	100	80.612	Oryctolagus_cuniculus
MGP_PahariEiJ_G0020648	Mrps18a	86	62.941	ENSORLG00000023864	mrps18a	82	62.941	Oryzias_latipes
MGP_PahariEiJ_G0020648	Mrps18a	86	63.529	ENSORLG00020002882	mrps18a	82	63.529	Oryzias_latipes_hni
MGP_PahariEiJ_G0020648	Mrps18a	86	62.941	ENSORLG00015022065	mrps18a	82	62.941	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020648	Mrps18a	86	64.118	ENSOMEG00000018124	mrps18a	81	64.118	Oryzias_melastigma
MGP_PahariEiJ_G0020648	Mrps18a	100	80.612	ENSOGAG00000026551	MRPS18A	100	80.612	Otolemur_garnettii
MGP_PahariEiJ_G0020648	Mrps18a	100	79.866	ENSOARG00000008279	MRPS18A	100	79.592	Ovis_aries
MGP_PahariEiJ_G0020648	Mrps18a	100	82.550	ENSPPAG00000036291	MRPS18A	99	83.333	Pan_paniscus
MGP_PahariEiJ_G0020648	Mrps18a	100	77.852	ENSPPRG00000006429	MRPS18A	99	78.571	Panthera_pardus
MGP_PahariEiJ_G0020648	Mrps18a	100	78.523	ENSPTIG00000001653	MRPS18A	99	79.365	Panthera_tigris_altaica
MGP_PahariEiJ_G0020648	Mrps18a	100	82.550	ENSPTRG00000018209	MRPS18A	99	83.333	Pan_troglodytes
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSPANG00000006967	MRPS18A	100	79.082	Papio_anubis
MGP_PahariEiJ_G0020648	Mrps18a	84	68.293	ENSPKIG00000012807	mrps18a	70	68.293	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020648	Mrps18a	78	66.379	ENSPSIG00000013672	MRPS18A	85	60.736	Pelodiscus_sinensis
MGP_PahariEiJ_G0020648	Mrps18a	65	68.702	ENSPMGG00000000493	mrps18a	76	66.667	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0020648	Mrps18a	100	89.262	ENSPEMG00000000405	Mrps18a	100	88.776	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020648	Mrps18a	84	64.242	ENSPMAG00000007012	mrps18a	90	64.242	Petromyzon_marinus
MGP_PahariEiJ_G0020648	Mrps18a	100	78.523	ENSPCIG00000024858	MRPS18A	100	78.061	Phascolarctos_cinereus
MGP_PahariEiJ_G0020648	Mrps18a	81	65.000	ENSPFOG00000009046	mrps18a	100	65.000	Poecilia_formosa
MGP_PahariEiJ_G0020648	Mrps18a	85	63.690	ENSPLAG00000011106	mrps18a	80	63.690	Poecilia_latipinna
MGP_PahariEiJ_G0020648	Mrps18a	85	63.690	ENSPMEG00000000736	mrps18a	82	65.772	Poecilia_mexicana
MGP_PahariEiJ_G0020648	Mrps18a	84	65.663	ENSPREG00000012172	mrps18a	89	61.677	Poecilia_reticulata
MGP_PahariEiJ_G0020648	Mrps18a	100	81.879	ENSPPYG00000017282	MRPS18A	100	80.612	Pongo_abelii
MGP_PahariEiJ_G0020648	Mrps18a	80	63.415	ENSPCAG00000004192	MRPS18A	99	63.415	Procavia_capensis
MGP_PahariEiJ_G0020648	Mrps18a	100	80.102	ENSPCOG00000014911	MRPS18A	100	80.102	Propithecus_coquereli
MGP_PahariEiJ_G0020648	Mrps18a	100	79.200	ENSPVAG00000002758	MRPS18A	100	56.015	Pteropus_vampyrus
MGP_PahariEiJ_G0020648	Mrps18a	100	58.000	ENSPNYG00000014753	mrps18a	94	57.868	Pundamilia_nyererei
MGP_PahariEiJ_G0020648	Mrps18a	84	61.677	ENSPNAG00000023462	mrps18a	86	59.116	Pygocentrus_nattereri
MGP_PahariEiJ_G0020648	Mrps18a	100	90.306	ENSRNOG00000019511	Mrps18a	100	90.306	Rattus_norvegicus
MGP_PahariEiJ_G0020648	Mrps18a	100	80.537	ENSRBIG00000028789	MRPS18A	99	80.952	Rhinopithecus_bieti
MGP_PahariEiJ_G0020648	Mrps18a	100	80.537	ENSRROG00000042368	-	99	80.952	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020648	Mrps18a	100	81.879	ENSSBOG00000019943	MRPS18A	100	81.633	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020648	Mrps18a	100	78.523	ENSSHAG00000015048	-	100	77.551	Sarcophilus_harrisii
MGP_PahariEiJ_G0020648	Mrps18a	93	62.637	ENSSFOG00015005628	mrps18a	88	62.637	Scleropages_formosus
MGP_PahariEiJ_G0020648	Mrps18a	84	65.663	ENSSMAG00000009353	mrps18a	80	65.663	Scophthalmus_maximus
MGP_PahariEiJ_G0020648	Mrps18a	76	63.758	ENSSDUG00000011655	mrps18a	82	66.443	Seriola_dumerili
MGP_PahariEiJ_G0020648	Mrps18a	69	68.613	ENSSLDG00000025435	mrps18a	73	68.613	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020648	Mrps18a	100	67.333	ENSSPUG00000011517	MRPS18A	100	65.482	Sphenodon_punctatus
MGP_PahariEiJ_G0020648	Mrps18a	100	59.898	ENSSPAG00000000034	mrps18a	94	59.898	Stegastes_partitus
MGP_PahariEiJ_G0020648	Mrps18a	100	78.061	ENSSSCG00000001692	MRPS18A	100	78.061	Sus_scrofa
MGP_PahariEiJ_G0020648	Mrps18a	76	70.270	ENSTGUG00000008142	MRPS18A	100	70.270	Taeniopygia_guttata
MGP_PahariEiJ_G0020648	Mrps18a	97	59.000	ENSTRUG00000025134	mrps18a	96	59.000	Takifugu_rubripes
MGP_PahariEiJ_G0020648	Mrps18a	97	58.500	ENSTNIG00000016302	mrps18a	96	58.500	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020648	Mrps18a	100	71.538	ENSTBEG00000004094	MRPS18A	100	54.440	Tupaia_belangeri
MGP_PahariEiJ_G0020648	Mrps18a	100	69.048	ENSTTRG00000006354	MRPS18A	100	45.353	Tursiops_truncatus
MGP_PahariEiJ_G0020648	Mrps18a	100	79.592	ENSUAMG00000013758	MRPS18A	100	79.592	Ursus_americanus
MGP_PahariEiJ_G0020648	Mrps18a	100	79.082	ENSUMAG00000005910	MRPS18A	100	79.082	Ursus_maritimus
MGP_PahariEiJ_G0020648	Mrps18a	100	77.551	ENSVVUG00000029092	-	100	77.551	Vulpes_vulpes
MGP_PahariEiJ_G0020648	Mrps18a	77	63.816	ENSVVUG00000022444	-	75	63.816	Vulpes_vulpes
MGP_PahariEiJ_G0020648	Mrps18a	99	63.946	ENSXETG00000003270	mrps18a	95	64.667	Xenopus_tropicalis
MGP_PahariEiJ_G0020648	Mrps18a	78	62.745	ENSXCOG00000007223	mrps18a	84	63.291	Xiphophorus_couchianus
MGP_PahariEiJ_G0020648	Mrps18a	85	62.500	ENSXMAG00000004867	mrps18a	84	63.291	Xiphophorus_maculatus