EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020917 (Gene tree)
Gene ID: 110335543
Gene Symbol: Lrpprc
Alias: 3110001K13Rik|Lrp130
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 86720 bases
Position: chr18:50403237-50489956
Accession: 110335543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0045269	PPR	PF01535.20	1.6e-27	1	3
MGP_PahariEiJ_P0045269	PPR	PF01535.20	1.6e-27	2	3
MGP_PahariEiJ_P0045269	PPR	PF01535.20	1.6e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0045269	-	4376	XM_021217727	MGP_PahariEiJ_P0045269	1392 (aa)	XP_021073386	UPI000A30EC43
MGP_PahariEiJ_T0045271	-	565	-	MGP_PahariEiJ_P0045271	141 (aa)	-	-
MGP_PahariEiJ_T0045270	-	673	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045273	-	2632	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045272	-	540	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045275	-	963	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045274	-	3881	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0020917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020917	Lrpprc	100	76.255	ENSG00000138095	LRPPRC	100	76.255	Homo_sapiens
MGP_PahariEiJ_G0020917	Lrpprc	94	57.883	ENSAPLG00000008902	LRPPRC	99	57.807	Anas_platyrhynchos
MGP_PahariEiJ_G0020917	Lrpprc	99	78.089	ENSBTAG00000016368	LRPPRC	99	78.089	Bos_taurus
MGP_PahariEiJ_G0020917	Lrpprc	99	76.884	ENSCAFG00000002527	LRPPRC	99	76.884	Canis_familiaris
MGP_PahariEiJ_G0020917	Lrpprc	99	76.095	ENSCAFG00020025995	LRPPRC	99	76.095	Canis_lupus_dingo
MGP_PahariEiJ_G0020917	Lrpprc	96	78.779	ENSTSYG00000013197	LRPPRC	96	78.779	Carlito_syrichta
MGP_PahariEiJ_G0020917	Lrpprc	100	62.633	ENSCPBG00000005446	LRPPRC	99	64.012	Chrysemys_picta_bellii
MGP_PahariEiJ_G0020917	Lrpprc	67	32.989	FBgn0284256	bsf	78	30.817	Drosophila_melanogaster
MGP_PahariEiJ_G0020917	Lrpprc	99	79.914	ENSEASG00005003715	LRPPRC	99	79.770	Equus_asinus_asinus
MGP_PahariEiJ_G0020917	Lrpprc	99	78.989	ENSECAG00000023814	LRPPRC	96	78.845	Equus_caballus
MGP_PahariEiJ_G0020917	Lrpprc	96	55.878	ENSGALG00000009967	LRPPRC	99	55.263	Gallus_gallus
MGP_PahariEiJ_G0020917	Lrpprc	97	63.950	ENSGAGG00000020227	LRPPRC	99	62.908	Gopherus_agassizii
MGP_PahariEiJ_G0020917	Lrpprc	100	76.395	ENSMLEG00000043673	LRPPRC	100	76.395	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020917	Lrpprc	96	56.493	ENSMGAG00000010201	LRPPRC	99	56.567	Meleagris_gallopavo
MGP_PahariEiJ_G0020917	Lrpprc	100	93.463	MGP_CAROLIEiJ_G0021927	Lrpprc	100	93.463	Mus_caroli
MGP_PahariEiJ_G0020917	Lrpprc	100	93.391	ENSMUSG00000024120	Lrpprc	100	93.391	Mus_musculus
MGP_PahariEiJ_G0020917	Lrpprc	100	93.750	MGP_SPRETEiJ_G0022843	Lrpprc	100	93.750	Mus_spretus
MGP_PahariEiJ_G0020917	Lrpprc	81	80.000	ENSMEUG00000004430	-	89	80.000	Notamacropus_eugenii
MGP_PahariEiJ_G0020917	Lrpprc	100	84.626	ENSPEMG00000022720	Lrpprc	100	84.626	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020917	Lrpprc	99	66.262	ENSPCIG00000006872	LRPPRC	99	66.262	Phascolarctos_cinereus
MGP_PahariEiJ_G0020917	Lrpprc	99	77.260	ENSPCOG00000001309	LRPPRC	99	77.188	Propithecus_coquereli
MGP_PahariEiJ_G0020917	Lrpprc	89	59.457	ENSSPUG00000005188	LRPPRC	99	59.218	Sphenodon_punctatus
MGP_PahariEiJ_G0020917	Lrpprc	66	76.471	ENSTBEG00000011055	-	66	76.471	Tupaia_belangeri
MGP_PahariEiJ_G0020917	Lrpprc	100	77.419	ENSUAMG00000022940	LRPPRC	100	77.419	Ursus_americanus
MGP_PahariEiJ_G0020917	Lrpprc	100	77.491	ENSUMAG00000012801	LRPPRC	100	77.580	Ursus_maritimus
MGP_PahariEiJ_G0020917	Lrpprc	99	75.808	ENSVVUG00000002339	LRPPRC	99	76.056	Vulpes_vulpes