EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0020968 (Gene tree)
Gene ID: 110336621
Gene Symbol: Tsen34
Alias: 0610027F08Rik|Leng5
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 8451 bases
Position: chr19:563865-572315
Accession: 110336621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0045467	tRNA_int_endo	PF01974.17	7.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0045472	-	934	-	MGP_PahariEiJ_P0045472	168 (aa)	-	-
MGP_PahariEiJ_T0045471	-	481	-	MGP_PahariEiJ_P0045471	144 (aa)	-	-
MGP_PahariEiJ_T0045470	-	712	-	MGP_PahariEiJ_P0045470	159 (aa)	-	-
MGP_PahariEiJ_T0045468	-	723	-	MGP_PahariEiJ_P0045468	151 (aa)	-	-
MGP_PahariEiJ_T0045466	-	337	-	MGP_PahariEiJ_P0045466	85 (aa)	-	UPI000719A3ED
MGP_PahariEiJ_T0045469	-	1171	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045467	-	1971	-	MGP_PahariEiJ_P0045467	313 (aa)	XP_021074949	UPI000A3073F6

Gene Model

Click here to download MGP_PahariEiJ_G0020968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0020968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSG00000170892	TSEN34	100	88.498	Homo_sapiens
MGP_PahariEiJ_G0020968	Tsen34	94	37.162	ENSAPOG00000008579	-	93	37.162	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020968	Tsen34	99	38.141	ENSAPOG00000001248	tsen34	93	38.141	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020968	Tsen34	94	35.473	ENSAPOG00000012557	-	86	35.473	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0020968	Tsen34	92	87.108	ENSAMEG00000004585	TSEN34	100	87.108	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0020968	Tsen34	99	38.318	ENSACIG00000007110	tsen34	87	38.318	Amphilophus_citrinellus
MGP_PahariEiJ_G0020968	Tsen34	99	38.907	ENSAOCG00000006905	tsen34	93	38.907	Amphiprion_ocellaris
MGP_PahariEiJ_G0020968	Tsen34	99	39.228	ENSAPEG00000019171	tsen34	93	39.228	Amphiprion_percula
MGP_PahariEiJ_G0020968	Tsen34	100	44.969	ENSACAG00000016189	TSEN34	100	44.969	Anolis_carolinensis
MGP_PahariEiJ_G0020968	Tsen34	100	89.457	ENSANAG00000026113	TSEN34	100	89.457	Aotus_nancymaae
MGP_PahariEiJ_G0020968	Tsen34	99	38.339	ENSAMXG00000017568	tsen34	86	38.339	Astyanax_mexicanus
MGP_PahariEiJ_G0020968	Tsen34	100	87.580	ENSBTAG00000006486	TSEN34	100	87.580	Bos_taurus
MGP_PahariEiJ_G0020968	Tsen34	100	85.942	ENSCJAG00000001128	TSEN34	99	87.667	Callithrix_jacchus
MGP_PahariEiJ_G0020968	Tsen34	100	86.581	ENSCAFG00000002675	TSEN34	100	86.581	Canis_familiaris
MGP_PahariEiJ_G0020968	Tsen34	100	87.540	ENSCAFG00020018350	TSEN34	100	87.540	Canis_lupus_dingo
MGP_PahariEiJ_G0020968	Tsen34	100	84.345	ENSCHIG00000020705	TSEN34	100	84.345	Capra_hircus
MGP_PahariEiJ_G0020968	Tsen34	98	85.668	ENSTSYG00000028200	TSEN34	98	85.668	Carlito_syrichta
MGP_PahariEiJ_G0020968	Tsen34	66	78.095	ENSCAPG00000012811	-	99	78.095	Cavia_aperea
MGP_PahariEiJ_G0020968	Tsen34	99	81.447	ENSCPOG00000012672	TSEN34	99	81.447	Cavia_porcellus
MGP_PahariEiJ_G0020968	Tsen34	100	89.137	ENSCCAG00000036023	TSEN34	100	89.137	Cebus_capucinus
MGP_PahariEiJ_G0020968	Tsen34	96	86.333	ENSCATG00000033390	TSEN34	94	86.333	Cercocebus_atys
MGP_PahariEiJ_G0020968	Tsen34	100	84.984	ENSCLAG00000000618	TSEN34	100	84.984	Chinchilla_lanigera
MGP_PahariEiJ_G0020968	Tsen34	100	87.859	ENSCSAG00000001891	TSEN34	100	87.859	Chlorocebus_sabaeus
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSCANG00000040984	TSEN34	100	88.179	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0020968	Tsen34	100	93.987	ENSCGRG00001006296	Tsen34	100	93.987	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0020968	Tsen34	73	85.294	ENSCGRG00000008494	Tsen34	100	87.815	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0020968	Tsen34	96	38.944	ENSCSEG00000006278	tsen34	86	38.944	Cynoglossus_semilaevis
MGP_PahariEiJ_G0020968	Tsen34	99	37.539	ENSDARG00000061370	tsen34	89	37.855	Danio_rerio
MGP_PahariEiJ_G0020968	Tsen34	100	85.942	ENSDNOG00000039332	TSEN34	100	85.623	Dasypus_novemcinctus
MGP_PahariEiJ_G0020968	Tsen34	100	85.942	ENSDORG00000029071	Tsen34	100	85.942	Dipodomys_ordii
MGP_PahariEiJ_G0020968	Tsen34	100	87.859	ENSEASG00005021580	TSEN34	100	87.859	Equus_asinus_asinus
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSECAG00000019651	TSEN34	86	88.179	Equus_caballus
MGP_PahariEiJ_G0020968	Tsen34	60	82.011	ENSEEUG00000005692	TSEN34	66	82.011	Erinaceus_europaeus
MGP_PahariEiJ_G0020968	Tsen34	99	36.991	ENSELUG00000006262	tsen34	92	36.991	Esox_lucius
MGP_PahariEiJ_G0020968	Tsen34	100	86.581	ENSFCAG00000014045	TSEN34	100	86.581	Felis_catus
MGP_PahariEiJ_G0020968	Tsen34	84	80.682	ENSFDAG00000017995	TSEN34	98	82.171	Fukomys_damarensis
MGP_PahariEiJ_G0020968	Tsen34	62	39.196	ENSGMOG00000001961	tsen34	96	39.196	Gadus_morhua
MGP_PahariEiJ_G0020968	Tsen34	99	39.228	ENSGAFG00000016880	tsen34	93	39.228	Gambusia_affinis
MGP_PahariEiJ_G0020968	Tsen34	99	38.125	ENSGACG00000004800	tsen34	99	38.125	Gasterosteus_aculeatus
MGP_PahariEiJ_G0020968	Tsen34	100	46.082	ENSGAGG00000008982	TSEN34	73	46.082	Gopherus_agassizii
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSGGOG00000008197	TSEN34	100	88.498	Gorilla_gorilla
MGP_PahariEiJ_G0020968	Tsen34	100	84.810	ENSHGLG00000017619	TSEN34	100	84.810	Heterocephalus_glaber_female
MGP_PahariEiJ_G0020968	Tsen34	100	68.553	ENSHGLG00100008719	TSEN34	100	68.652	Heterocephalus_glaber_male
MGP_PahariEiJ_G0020968	Tsen34	96	38.487	ENSHCOG00000001368	tsen34	92	38.487	Hippocampus_comes
MGP_PahariEiJ_G0020968	Tsen34	96	36.859	ENSIPUG00000008359	tsen34	85	36.859	Ictalurus_punctatus
MGP_PahariEiJ_G0020968	Tsen34	100	85.942	ENSSTOG00000023816	TSEN34	100	85.942	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0020968	Tsen34	100	90.536	ENSJJAG00000016301	Tsen34	100	90.536	Jaculus_jaculus
MGP_PahariEiJ_G0020968	Tsen34	99	38.801	ENSKMAG00000007181	tsen34	82	40.065	Kryptolebias_marmoratus
MGP_PahariEiJ_G0020968	Tsen34	99	39.683	ENSLBEG00000015001	tsen34	94	39.683	Labrus_bergylta
MGP_PahariEiJ_G0020968	Tsen34	74	44.351	ENSLACG00000013346	-	99	44.351	Latimeria_chalumnae
MGP_PahariEiJ_G0020968	Tsen34	99	39.550	ENSLOCG00000001887	tsen34	97	39.550	Lepisosteus_oculatus
MGP_PahariEiJ_G0020968	Tsen34	100	86.520	ENSLAFG00000015215	TSEN34	100	85.670	Loxodonta_africana
MGP_PahariEiJ_G0020968	Tsen34	100	87.859	ENSMFAG00000044825	TSEN34	100	87.859	Macaca_fascicularis
MGP_PahariEiJ_G0020968	Tsen34	100	87.859	ENSMMUG00000016571	TSEN34	100	87.859	Macaca_mulatta
MGP_PahariEiJ_G0020968	Tsen34	100	87.859	ENSMNEG00000045457	TSEN34	100	87.859	Macaca_nemestrina
MGP_PahariEiJ_G0020968	Tsen34	96	72.333	ENSMLEG00000034295	TSEN34	93	72.333	Mandrillus_leucophaeus
MGP_PahariEiJ_G0020968	Tsen34	99	38.730	ENSMAMG00000018407	tsen34	95	38.019	Mastacembelus_armatus
MGP_PahariEiJ_G0020968	Tsen34	81	93.725	ENSMAUG00000019716	Tsen34	81	93.725	Mesocricetus_auratus
MGP_PahariEiJ_G0020968	Tsen34	100	90.415	ENSMICG00000002409	TSEN34	100	90.415	Microcebus_murinus
MGP_PahariEiJ_G0020968	Tsen34	100	95.925	ENSMOCG00000022190	Tsen34	100	95.925	Microtus_ochrogaster
MGP_PahariEiJ_G0020968	Tsen34	99	36.218	ENSMMOG00000009551	tsen34	99	34.936	Mola_mola
MGP_PahariEiJ_G0020968	Tsen34	99	58.013	ENSMODG00000003984	-	76	60.897	Monodelphis_domestica
MGP_PahariEiJ_G0020968	Tsen34	97	38.535	ENSMALG00000018918	tsen34	94	37.778	Monopterus_albus
MGP_PahariEiJ_G0020968	Tsen34	100	99.042	MGP_CAROLIEiJ_G0029099	Tsen34	100	99.042	Mus_caroli
MGP_PahariEiJ_G0020968	Tsen34	100	99.042	ENSMUSG00000035585	Tsen34	100	99.042	Mus_musculus
MGP_PahariEiJ_G0020968	Tsen34	100	99.361	MGP_SPRETEiJ_G0030152	Tsen34	100	99.361	Mus_spretus
MGP_PahariEiJ_G0020968	Tsen34	100	86.581	ENSMPUG00000010373	TSEN34	100	87.540	Mustela_putorius_furo
MGP_PahariEiJ_G0020968	Tsen34	100	86.349	ENSMLUG00000016894	TSEN34	100	86.349	Myotis_lucifugus
MGP_PahariEiJ_G0020968	Tsen34	86	87.687	ENSNGAG00000016187	Tsen34	97	87.687	Nannospalax_galili
MGP_PahariEiJ_G0020968	Tsen34	100	86.581	ENSNLEG00000006309	TSEN34	100	86.581	Nomascus_leucogenys
MGP_PahariEiJ_G0020968	Tsen34	99	60.256	ENSMEUG00000002978	TSEN34	99	60.256	Notamacropus_eugenii
MGP_PahariEiJ_G0020968	Tsen34	100	78.816	ENSODEG00000000096	TSEN34	100	78.816	Octodon_degus
MGP_PahariEiJ_G0020968	Tsen34	76	51.883	ENSOANG00000014747	-	99	52.917	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0020968	Tsen34	99	38.978	ENSORLG00015012740	tsen34	94	38.978	Oryzias_latipes_hsok
MGP_PahariEiJ_G0020968	Tsen34	100	87.220	ENSOGAG00000006966	TSEN34	100	87.220	Otolemur_garnettii
MGP_PahariEiJ_G0020968	Tsen34	91	80.702	ENSOARG00000002763	TSEN34	95	80.702	Ovis_aries
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSPPAG00000036935	TSEN34	100	88.179	Pan_paniscus
MGP_PahariEiJ_G0020968	Tsen34	100	86.901	ENSPPRG00000011779	TSEN34	100	86.901	Panthera_pardus
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSPTRG00000044768	-	100	88.498	Pan_troglodytes
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSPTRG00000011448	TSEN34	100	88.498	Pan_troglodytes
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSPANG00000012101	TSEN34	100	88.179	Papio_anubis
MGP_PahariEiJ_G0020968	Tsen34	96	38.111	ENSPKIG00000014674	tsen34	90	38.436	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0020968	Tsen34	100	97.125	ENSPEMG00000014535	Tsen34	100	97.125	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0020968	Tsen34	99	39.557	ENSPFOG00000008679	tsen34	93	39.365	Poecilia_formosa
MGP_PahariEiJ_G0020968	Tsen34	99	38.462	ENSPLAG00000017309	tsen34	93	39.048	Poecilia_latipinna
MGP_PahariEiJ_G0020968	Tsen34	99	39.557	ENSPMEG00000005235	tsen34	93	39.365	Poecilia_mexicana
MGP_PahariEiJ_G0020968	Tsen34	99	38.854	ENSPREG00000021784	tsen34	93	38.854	Poecilia_reticulata
MGP_PahariEiJ_G0020968	Tsen34	100	89.137	ENSPPYG00000010376	TSEN34	96	89.137	Pongo_abelii
MGP_PahariEiJ_G0020968	Tsen34	99	88.141	ENSPCAG00000012359	TSEN34	100	88.141	Procavia_capensis
MGP_PahariEiJ_G0020968	Tsen34	100	90.127	ENSPCOG00000013843	TSEN34	100	90.127	Propithecus_coquereli
MGP_PahariEiJ_G0020968	Tsen34	100	83.706	ENSPVAG00000015570	TSEN34	100	83.706	Pteropus_vampyrus
MGP_PahariEiJ_G0020968	Tsen34	99	36.562	ENSPNAG00000028698	tsen34	86	36.562	Pygocentrus_nattereri
MGP_PahariEiJ_G0020968	Tsen34	100	99.361	ENSRNOG00000055179	Tsen34	100	99.361	Rattus_norvegicus
MGP_PahariEiJ_G0020968	Tsen34	100	99.361	ENSRNOG00000059572	Tsen34l1	100	99.361	Rattus_norvegicus
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSRBIG00000034430	TSEN34	100	88.498	Rhinopithecus_bieti
MGP_PahariEiJ_G0020968	Tsen34	100	88.498	ENSRROG00000024217	TSEN34	100	88.498	Rhinopithecus_roxellana
MGP_PahariEiJ_G0020968	Tsen34	96	89.000	ENSSBOG00000016017	TSEN34	97	88.963	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0020968	Tsen34	70	57.078	ENSSHAG00000009295	-	99	58.904	Sarcophilus_harrisii
MGP_PahariEiJ_G0020968	Tsen34	72	36.283	ENSSFOG00015017579	tsen34	80	36.283	Scleropages_formosus
MGP_PahariEiJ_G0020968	Tsen34	96	40.132	ENSSMAG00000005214	tsen34	93	40.132	Scophthalmus_maximus
MGP_PahariEiJ_G0020968	Tsen34	99	39.297	ENSSDUG00000005391	tsen34	91	39.297	Seriola_dumerili
MGP_PahariEiJ_G0020968	Tsen34	99	39.617	ENSSLDG00000006144	tsen34	88	39.617	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0020968	Tsen34	94	75.839	ENSSARG00000005857	TSEN34	79	75.839	Sorex_araneus
MGP_PahariEiJ_G0020968	Tsen34	100	41.433	ENSSPUG00000008447	TSEN34	100	41.433	Sphenodon_punctatus
MGP_PahariEiJ_G0020968	Tsen34	99	37.942	ENSSPAG00000010512	tsen34	92	37.621	Stegastes_partitus
MGP_PahariEiJ_G0020968	Tsen34	100	86.984	ENSSSCG00000003268	TSEN34	100	87.540	Sus_scrofa
MGP_PahariEiJ_G0020968	Tsen34	99	38.339	ENSTNIG00000011201	tsen34	99	39.308	Tetraodon_nigroviridis
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSTTRG00000006571	TSEN34	100	88.179	Tursiops_truncatus
MGP_PahariEiJ_G0020968	Tsen34	100	88.179	ENSUAMG00000008701	TSEN34	100	88.179	Ursus_americanus
MGP_PahariEiJ_G0020968	Tsen34	100	87.540	ENSVVUG00000008211	TSEN34	100	87.540	Vulpes_vulpes
MGP_PahariEiJ_G0020968	Tsen34	100	42.500	ENSXETG00000004597	tsen34	100	43.302	Xenopus_tropicalis
MGP_PahariEiJ_G0020968	Tsen34	99	38.907	ENSXMAG00000024266	tsen34	93	38.907	Xiphophorus_maculatus