EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021008 (Gene tree)
Gene ID: 110336517
Gene Symbol: Zfp579
Alias: 1110003A17Rik
Full Name: zinc finger protein 579
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 13243 bases
Position: chr19:1923236-1936478
Accession: 110336517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	1	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	2	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	3	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	4	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	5	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	6	7
MGP_PahariEiJ_P0045664	zf-C2H2	PF00096.26	5.6e-35	7	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	1	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	2	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	3	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	4	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	5	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	6	7
MGP_PahariEiJ_P0045665	zf-C2H2	PF00096.26	5.6e-35	7	7
MGP_PahariEiJ_P0045666	zf-C2H2	PF00096.26	6.8e-14	1	3
MGP_PahariEiJ_P0045666	zf-C2H2	PF00096.26	6.8e-14	2	3
MGP_PahariEiJ_P0045666	zf-C2H2	PF00096.26	6.8e-14	3	3
MGP_PahariEiJ_P0045666	zf-met	PF12874.7	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0045666	-	794	-	MGP_PahariEiJ_P0045666	236 (aa)	-	-
MGP_PahariEiJ_T0045667	-	366	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045664	-	2490	XM_021219117	MGP_PahariEiJ_P0045664	562 (aa)	XP_021074776	UPI000A307621
MGP_PahariEiJ_T0045665	-	2157	XM_021219118	MGP_PahariEiJ_P0045665	562 (aa)	XP_021074777	UPI000A307621
MGP_PahariEiJ_T0045662	-	1570	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045663	-	856	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0021008	Zfp579	79	36.986	MGP_PahariEiJ_G0012724	Zfp420	96	38.462
MGP_PahariEiJ_G0021008	Zfp579	85	35.366	MGP_PahariEiJ_G0012663	-	72	43.396
MGP_PahariEiJ_G0021008	Zfp579	75	43.860	MGP_PahariEiJ_G0021012	-	67	42.593
MGP_PahariEiJ_G0021008	Zfp579	75	39.773	MGP_PahariEiJ_G0013732	Zfp646	71	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021008	Zfp579	100	97.034	MGP_CAROLIEiJ_G0029140	Zfp579	100	97.034	Mus_caroli
MGP_PahariEiJ_G0021008	Zfp579	100	97.687	ENSMUSG00000051550	Zfp579	100	97.687	Mus_musculus
MGP_PahariEiJ_G0021008	Zfp579	100	97.153	MGP_SPRETEiJ_G0030193	Zfp579	100	97.153	Mus_spretus