EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021074 (Gene tree)
Gene ID: 110336884
Gene Symbol: -
Alias: 9430097C02Rik|Gltscr2
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 10315 bases
Position: chr19:11366497-11376811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0045849	Nop53	PF07767.11	4.4e-89	1	1
MGP_PahariEiJ_P0045851	Nop53	PF07767.11	1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0045851	-	1276	-	MGP_PahariEiJ_P0045851	188 (aa)	-	-
MGP_PahariEiJ_T0045850	-	1585	-	-	- (aa)	-	-
MGP_PahariEiJ_T0045849	-	3356	-	MGP_PahariEiJ_P0045849	430 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021074	-	100	77.660	ENSG00000105373	NOP53	99	93.827	Homo_sapiens
MGP_PahariEiJ_G0021074	-	95	43.885	ENSAPOG00000006446	nop53	85	45.521	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021074	-	96	72.471	ENSAMEG00000015214	NOP53	85	72.877	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021074	-	80	54.000	ENSACIG00000002467	nop53	98	46.133	Amphilophus_citrinellus
MGP_PahariEiJ_G0021074	-	95	44.712	ENSAOCG00000007002	nop53	85	45.388	Amphiprion_ocellaris
MGP_PahariEiJ_G0021074	-	95	44.844	ENSAPEG00000024564	nop53	85	45.564	Amphiprion_percula
MGP_PahariEiJ_G0021074	-	91	44.862	ENSATEG00000021860	nop53	85	45.316	Anabas_testudineus
MGP_PahariEiJ_G0021074	-	99	55.789	ENSACAG00000011362	-	100	56.376	Anolis_carolinensis
MGP_PahariEiJ_G0021074	-	99	78.075	ENSANAG00000007933	NOP53	90	74.696	Aotus_nancymaae
MGP_PahariEiJ_G0021074	-	95	44.869	ENSACLG00000011832	nop53	86	45.823	Astatotilapia_calliptera
MGP_PahariEiJ_G0021074	-	96	47.458	ENSAMXG00000014883	nop53	85	47.242	Astyanax_mexicanus
MGP_PahariEiJ_G0021074	-	100	79.787	ENSBTAG00000021192	NOP53	77	77.670	Bos_taurus
MGP_PahariEiJ_G0021074	-	100	77.895	ENSCJAG00000011385	NOP53	85	79.710	Callithrix_jacchus
MGP_PahariEiJ_G0021074	-	99	80.319	ENSCAFG00000004080	NOP53	85	79.612	Canis_familiaris
MGP_PahariEiJ_G0021074	-	99	80.214	ENSCHIG00000009393	NOP53	85	78.345	Capra_hircus
MGP_PahariEiJ_G0021074	-	96	68.599	ENSTSYG00000036631	NOP53	83	68.599	Carlito_syrichta
MGP_PahariEiJ_G0021074	-	99	79.144	ENSCAPG00000013148	NOP53	100	79.551	Cavia_aperea
MGP_PahariEiJ_G0021074	-	99	78.610	ENSCPOG00000015665	NOP53	85	79.218	Cavia_porcellus
MGP_PahariEiJ_G0021074	-	100	81.383	ENSCCAG00000025477	NOP53	85	80.097	Cebus_capucinus
MGP_PahariEiJ_G0021074	-	100	80.319	ENSCATG00000032842	NOP53	85	80.340	Cercocebus_atys
MGP_PahariEiJ_G0021074	-	100	79.255	ENSCLAG00000001860	NOP53	85	78.293	Chinchilla_lanigera
MGP_PahariEiJ_G0021074	-	100	79.255	ENSCSAG00000002928	NOP53	85	80.097	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021074	-	99	60.428	ENSCPBG00000009047	NOP53	97	58.255	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021074	-	96	31.925	ENSCING00000021395	-	93	33.023	Ciona_intestinalis
MGP_PahariEiJ_G0021074	-	100	37.629	ENSCSAVG00000006009	-	92	33.484	Ciona_savignyi
MGP_PahariEiJ_G0021074	-	100	79.787	ENSCANG00000039648	NOP53	84	72.087	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021074	-	100	85.638	ENSCGRG00001019033	Nop53	85	87.379	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021074	-	98	46.486	ENSCSEG00000014834	nop53	86	43.914	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021074	-	95	45.116	ENSCVAG00000005940	nop53	86	46.635	Cyprinodon_variegatus
MGP_PahariEiJ_G0021074	-	99	51.613	ENSDARG00000100452	nop53	100	51.813	Danio_rerio
MGP_PahariEiJ_G0021074	-	100	79.787	ENSDNOG00000005165	NOP53	77	79.126	Dasypus_novemcinctus
MGP_PahariEiJ_G0021074	-	51	81.193	ENSDORG00000016339	-	75	81.193	Dipodomys_ordii
MGP_PahariEiJ_G0021074	-	98	30.851	FBgn0030061	CG1785	55	30.483	Drosophila_melanogaster
MGP_PahariEiJ_G0021074	-	99	72.193	ENSETEG00000003679	-	57	72.646	Echinops_telfairi
MGP_PahariEiJ_G0021074	-	96	42.961	ENSEBUG00000012747	nop53	85	44.175	Eptatretus_burgeri
MGP_PahariEiJ_G0021074	-	96	78.155	ENSEASG00005004345	NOP53	81	79.036	Equus_asinus_asinus
MGP_PahariEiJ_G0021074	-	100	78.866	ENSECAG00000026850	NOP53	81	79.277	Equus_caballus
MGP_PahariEiJ_G0021074	-	68	93.939	ENSEEUG00000005287	NOP53	72	93.939	Erinaceus_europaeus
MGP_PahariEiJ_G0021074	-	95	50.237	ENSELUG00000001525	nop53	86	50.000	Esox_lucius
MGP_PahariEiJ_G0021074	-	100	81.579	ENSFCAG00000010861	NOP53	85	79.469	Felis_catus
MGP_PahariEiJ_G0021074	-	96	63.614	ENSFDAG00000010478	NOP53	83	63.221	Fukomys_damarensis
MGP_PahariEiJ_G0021074	-	95	47.129	ENSFHEG00000017763	nop53	83	46.890	Fundulus_heteroclitus
MGP_PahariEiJ_G0021074	-	95	43.066	ENSGMOG00000014299	nop53	85	42.336	Gadus_morhua
MGP_PahariEiJ_G0021074	-	96	53.110	ENSGALG00000039473	NOP53	68	53.589	Gallus_gallus
MGP_PahariEiJ_G0021074	-	95	45.476	ENSGAFG00000013301	nop53	84	46.154	Gambusia_affinis
MGP_PahariEiJ_G0021074	-	95	46.043	ENSGACG00000005766	nop53	90	44.875	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021074	-	99	79.144	ENSGGOG00000005462	NOP53	81	80.729	Gorilla_gorilla
MGP_PahariEiJ_G0021074	-	95	69.157	ENSGGOG00000024728	-	84	71.325	Gorilla_gorilla
MGP_PahariEiJ_G0021074	-	95	45.542	ENSHBUG00000023625	nop53	86	46.265	Haplochromis_burtoni
MGP_PahariEiJ_G0021074	-	99	78.610	ENSHGLG00000018240	NOP53	85	77.616	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021074	-	73	88.189	ENSHGLG00100015613	NOP53	81	88.189	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021074	-	95	43.230	ENSHCOG00000017133	nop53	86	43.705	Hippocampus_comes
MGP_PahariEiJ_G0021074	-	96	51.095	ENSIPUG00000008154	nop53	76	51.338	Ictalurus_punctatus
MGP_PahariEiJ_G0021074	-	100	82.979	ENSSTOG00000022092	NOP53	85	81.553	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021074	-	99	80.214	ENSJJAG00000007854	Nop53	85	81.995	Jaculus_jaculus
MGP_PahariEiJ_G0021074	-	91	43.358	ENSKMAG00000020756	nop53	85	43.424	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021074	-	95	45.278	ENSLBEG00000011432	nop53	86	46.005	Labrus_bergylta
MGP_PahariEiJ_G0021074	-	100	57.143	ENSLACG00000018320	NOP53	100	51.707	Latimeria_chalumnae
MGP_PahariEiJ_G0021074	-	95	49.395	ENSLOCG00000014178	nop53	85	49.879	Lepisosteus_oculatus
MGP_PahariEiJ_G0021074	-	100	80.319	ENSMFAG00000045103	NOP53	85	80.825	Macaca_fascicularis
MGP_PahariEiJ_G0021074	-	100	79.787	ENSMMUG00000013348	NOP53	99	93.827	Macaca_mulatta
MGP_PahariEiJ_G0021074	-	100	79.787	ENSMNEG00000042540	NOP53	82	80.583	Macaca_nemestrina
MGP_PahariEiJ_G0021074	-	96	67.554	ENSMLEG00000032475	NOP53	85	66.667	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021074	-	95	46.283	ENSMAMG00000012652	nop53	86	46.763	Mastacembelus_armatus
MGP_PahariEiJ_G0021074	-	89	47.258	ENSMZEG00005005033	nop53	85	48.042	Maylandia_zebra
MGP_PahariEiJ_G0021074	-	100	84.043	ENSMAUG00000012617	Nop53	85	84.709	Mesocricetus_auratus
MGP_PahariEiJ_G0021074	-	99	76.471	ENSMICG00000005580	NOP53	88	77.941	Microcebus_murinus
MGP_PahariEiJ_G0021074	-	99	87.701	ENSMOCG00000008367	Nop53	85	88.808	Microtus_ochrogaster
MGP_PahariEiJ_G0021074	-	95	45.036	ENSMMOG00000006515	nop53	85	46.489	Mola_mola
MGP_PahariEiJ_G0021074	-	100	71.277	ENSMODG00000008721	NOP53	79	66.990	Monodelphis_domestica
MGP_PahariEiJ_G0021074	-	95	45.012	ENSMALG00000020350	nop53	82	46.715	Monopterus_albus
MGP_PahariEiJ_G0021074	-	100	96.277	MGP_CAROLIEiJ_G0029218	Nop53	100	96.277	Mus_caroli
MGP_PahariEiJ_G0021074	-	100	96.809	ENSMUSG00000041560	Nop53	85	96.117	Mus_musculus
MGP_PahariEiJ_G0021074	-	100	97.340	MGP_SPRETEiJ_G0030298	Nop53	100	97.340	Mus_spretus
MGP_PahariEiJ_G0021074	-	100	79.058	ENSMPUG00000004456	NOP53	85	79.277	Mustela_putorius_furo
MGP_PahariEiJ_G0021074	-	100	92.126	ENSMLUG00000027066	-	100	81.343	Myotis_lucifugus
MGP_PahariEiJ_G0021074	-	100	85.263	ENSNGAG00000019894	Nop53	85	84.783	Nannospalax_galili
MGP_PahariEiJ_G0021074	-	95	39.416	ENSNBRG00000002057	nop53	82	40.146	Neolamprologus_brichardi
MGP_PahariEiJ_G0021074	-	86	65.854	ENSNLEG00000028326	-	87	66.396	Nomascus_leucogenys
MGP_PahariEiJ_G0021074	-	100	79.255	ENSNLEG00000003143	NOP53	85	80.340	Nomascus_leucogenys
MGP_PahariEiJ_G0021074	-	76	69.014	ENSMEUG00000002525	-	100	58.602	Notamacropus_eugenii
MGP_PahariEiJ_G0021074	-	99	78.075	ENSODEG00000006707	NOP53	85	78.484	Octodon_degus
MGP_PahariEiJ_G0021074	-	95	45.626	ENSONIG00000016624	nop53	86	46.062	Oreochromis_niloticus
MGP_PahariEiJ_G0021074	-	93	50.857	ENSORLG00000008659	nop53	85	45.278	Oryzias_latipes
MGP_PahariEiJ_G0021074	-	93	50.286	ENSORLG00020019916	nop53	82	41.889	Oryzias_latipes_hni
MGP_PahariEiJ_G0021074	-	95	46.154	ENSORLG00015001315	nop53	85	47.494	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021074	-	98	49.462	ENSOMEG00000018244	nop53	86	46.763	Oryzias_melastigma
MGP_PahariEiJ_G0021074	-	96	59.767	ENSOARG00000011414	NOP53	85	59.767	Ovis_aries
MGP_PahariEiJ_G0021074	-	100	74.468	ENSPPAG00000002927	-	85	77.913	Pan_paniscus
MGP_PahariEiJ_G0021074	-	99	67.380	ENSPPAG00000032995	-	80	66.667	Pan_paniscus
MGP_PahariEiJ_G0021074	-	98	71.658	ENSPPAG00000029337	-	84	68.510	Pan_paniscus
MGP_PahariEiJ_G0021074	-	100	81.053	ENSPPRG00000008954	NOP53	85	78.986	Panthera_pardus
MGP_PahariEiJ_G0021074	-	100	79.255	ENSPTRG00000011215	NOP53	85	80.340	Pan_troglodytes
MGP_PahariEiJ_G0021074	-	98	71.658	ENSPTRG00000052493	-	84	68.510	Pan_troglodytes
MGP_PahariEiJ_G0021074	-	99	79.144	ENSPTRG00000043520	-	85	74.696	Pan_troglodytes
MGP_PahariEiJ_G0021074	-	100	78.723	ENSPANG00000002964	NOP53	85	80.583	Papio_anubis
MGP_PahariEiJ_G0021074	-	95	48.921	ENSPKIG00000000127	nop53	85	49.157	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021074	-	98	47.568	ENSPMGG00000021579	nop53	85	46.154	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0021074	-	100	90.957	ENSPEMG00000006856	Nop53	85	90.777	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021074	-	65	59.836	ENSPMAG00000009638	-	94	59.836	Petromyzon_marinus
MGP_PahariEiJ_G0021074	-	51	38.596	ENSPMAG00000001501	-	82	39.367	Petromyzon_marinus
MGP_PahariEiJ_G0021074	-	99	70.588	ENSPCIG00000016718	NOP53	86	62.945	Phascolarctos_cinereus
MGP_PahariEiJ_G0021074	-	95	46.905	ENSPFOG00000002839	nop53	86	46.905	Poecilia_formosa
MGP_PahariEiJ_G0021074	-	95	46.905	ENSPLAG00000006675	nop53	86	46.905	Poecilia_latipinna
MGP_PahariEiJ_G0021074	-	52	43.966	ENSPLAG00000009285	-	69	43.966	Poecilia_latipinna
MGP_PahariEiJ_G0021074	-	52	43.966	ENSPMEG00000006978	nop53	69	43.966	Poecilia_mexicana
MGP_PahariEiJ_G0021074	-	95	46.667	ENSPMEG00000009589	nop53	86	47.143	Poecilia_mexicana
MGP_PahariEiJ_G0021074	-	95	42.651	ENSPREG00000008711	nop53	84	42.926	Poecilia_reticulata
MGP_PahariEiJ_G0021074	-	96	71.566	ENSPPYG00000010181	NOP53	84	72.816	Pongo_abelii
MGP_PahariEiJ_G0021074	-	100	79.894	ENSPCAG00000007692	NOP53	81	78.811	Procavia_capensis
MGP_PahariEiJ_G0021074	-	77	91.379	ENSPCOG00000016124	NOP53	83	90.551	Propithecus_coquereli
MGP_PahariEiJ_G0021074	-	99	77.083	ENSPVAG00000014671	NOP53	63	78.868	Pteropus_vampyrus
MGP_PahariEiJ_G0021074	-	95	44.869	ENSPNYG00000001341	nop53	86	45.823	Pundamilia_nyererei
MGP_PahariEiJ_G0021074	-	96	50.242	ENSPNAG00000012520	nop53	86	49.880	Pygocentrus_nattereri
MGP_PahariEiJ_G0021074	-	100	92.021	ENSRNOG00000013023	Nop53	85	92.718	Rattus_norvegicus
MGP_PahariEiJ_G0021074	-	100	79.255	ENSRBIG00000036427	NOP53	85	80.097	Rhinopithecus_bieti
MGP_PahariEiJ_G0021074	-	100	79.787	ENSRROG00000042298	NOP53	85	80.340	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021074	-	100	78.723	ENSSBOG00000033115	NOP53	85	79.612	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021074	-	100	71.277	ENSSHAG00000002239	NOP53	100	66.828	Sarcophilus_harrisii
MGP_PahariEiJ_G0021074	-	95	51.699	ENSSFOG00015007062	gltscr2	85	51.699	Scleropages_formosus
MGP_PahariEiJ_G0021074	-	95	45.803	ENSSMAG00000000212	nop53	86	45.324	Scophthalmus_maximus
MGP_PahariEiJ_G0021074	-	95	45.411	ENSSDUG00000010575	nop53	85	45.874	Seriola_dumerili
MGP_PahariEiJ_G0021074	-	95	45.036	ENSSLDG00000000140	nop53	83	45.499	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021074	-	99	75.806	ENSSARG00000014109	NOP53	72	75.072	Sorex_araneus
MGP_PahariEiJ_G0021074	-	98	59.358	ENSSPUG00000004420	NOP53	80	51.075	Sphenodon_punctatus
MGP_PahariEiJ_G0021074	-	95	44.550	ENSSPAG00000000318	nop53	86	45.215	Stegastes_partitus
MGP_PahariEiJ_G0021074	-	99	78.075	ENSSSCG00000022774	NOP53	85	74.939	Sus_scrofa
MGP_PahariEiJ_G0021074	-	95	43.885	ENSTRUG00000004944	nop53	85	45.084	Takifugu_rubripes
MGP_PahariEiJ_G0021074	-	72	89.764	ENSTBEG00000008708	NOP53	65	89.764	Tupaia_belangeri
MGP_PahariEiJ_G0021074	-	100	77.249	ENSTTRG00000011831	NOP53	85	76.755	Tursiops_truncatus
MGP_PahariEiJ_G0021074	-	99	72.487	ENSUAMG00000028254	NOP53	85	73.123	Ursus_americanus
MGP_PahariEiJ_G0021074	-	73	76.025	ENSVVUG00000023365	NOP53	63	75.796	Vulpes_vulpes
MGP_PahariEiJ_G0021074	-	91	66.372	ENSXETG00000002782	nop53	87	50.485	Xenopus_tropicalis
MGP_PahariEiJ_G0021074	-	98	49.730	ENSXCOG00000004436	nop53	85	46.635	Xiphophorus_couchianus
MGP_PahariEiJ_G0021074	-	98	49.730	ENSXMAG00000002589	nop53	86	46.336	Xiphophorus_maculatus