EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021089 (Gene tree)
Gene ID: 110336519
Gene Symbol: Zc3h4
Alias: Bwq1|Kiaa1064-hp|LOC330474
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 36829 bases
Position: chr19:11821344-11858172
Accession: 110336519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0045911	zf-CCCH	PF00642.24	6.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0045911	-	6009	XM_021219119	MGP_PahariEiJ_P0045911	1251 (aa)	XP_021074778	UPI000A30FE27

Gene Model

Click here to download MGP_PahariEiJ_G0021089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0021089	Zc3h4	82	32.618	MGP_PahariEiJ_G0025723	Zc3h6	65	49.770

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021089	Zc3h4	98	87.772	ENSG00000130749	ZC3H4	95	87.229	Homo_sapiens
MGP_PahariEiJ_G0021089	Zc3h4	98	85.209	ENSANAG00000023963	ZC3H4	95	86.356	Aotus_nancymaae
MGP_PahariEiJ_G0021089	Zc3h4	98	88.434	ENSBTAG00000009286	ZC3H4	95	85.931	Bos_taurus
MGP_PahariEiJ_G0021089	Zc3h4	98	86.232	ENSCJAG00000011601	ZC3H4	95	87.681	Callithrix_jacchus
MGP_PahariEiJ_G0021089	Zc3h4	98	83.693	ENSCAFG00000004182	ZC3H4	95	84.677	Canis_familiaris
MGP_PahariEiJ_G0021089	Zc3h4	98	79.968	ENSCHIG00000013956	ZC3H4	95	83.760	Capra_hircus
MGP_PahariEiJ_G0021089	Zc3h4	89	87.704	ENSTSYG00000000926	ZC3H4	94	88.314	Carlito_syrichta
MGP_PahariEiJ_G0021089	Zc3h4	98	86.645	ENSCCAG00000037597	ZC3H4	96	87.811	Cebus_capucinus
MGP_PahariEiJ_G0021089	Zc3h4	98	86.887	ENSCATG00000039046	ZC3H4	95	86.345	Cercocebus_atys
MGP_PahariEiJ_G0021089	Zc3h4	94	86.376	ENSCLAG00000001032	ZC3H4	100	86.775	Chinchilla_lanigera
MGP_PahariEiJ_G0021089	Zc3h4	98	87.611	ENSCSAG00000002989	ZC3H4	98	87.068	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021089	Zc3h4	85	96.435	ENSCGRG00001016116	Zc3h4	100	96.435	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021089	Zc3h4	98	83.868	ENSDNOG00000003764	ZC3H4	95	84.189	Dasypus_novemcinctus
MGP_PahariEiJ_G0021089	Zc3h4	100	83.426	ENSDORG00000002726	Zc3h4	100	85.669	Dipodomys_ordii
MGP_PahariEiJ_G0021089	Zc3h4	76	97.802	ENSETEG00000005763	ZC3H4	74	97.826	Echinops_telfairi
MGP_PahariEiJ_G0021089	Zc3h4	98	87.400	ENSECAG00000024342	ZC3H4	99	86.538	Equus_caballus
MGP_PahariEiJ_G0021089	Zc3h4	81	82.143	ENSEEUG00000000519	ZC3H4	70	89.655	Erinaceus_europaeus
MGP_PahariEiJ_G0021089	Zc3h4	98	87.229	ENSFCAG00000004835	ZC3H4	95	87.871	Felis_catus
MGP_PahariEiJ_G0021089	Zc3h4	98	87.852	ENSGGOG00000013071	ZC3H4	95	87.309	Gorilla_gorilla
MGP_PahariEiJ_G0021089	Zc3h4	94	93.023	ENSSTOG00000016249	ZC3H4	99	93.023	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021089	Zc3h4	100	90.571	ENSJJAG00000019068	Zc3h4	100	89.937	Jaculus_jaculus
MGP_PahariEiJ_G0021089	Zc3h4	98	85.405	ENSLAFG00000001586	ZC3H4	95	84.788	Loxodonta_africana
MGP_PahariEiJ_G0021089	Zc3h4	98	87.530	ENSMFAG00000041518	ZC3H4	95	87.149	Macaca_fascicularis
MGP_PahariEiJ_G0021089	Zc3h4	98	87.530	ENSMLEG00000007946	ZC3H4	99	86.988	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021089	Zc3h4	100	96.414	ENSMAUG00000000068	Zc3h4	100	96.414	Mesocricetus_auratus
MGP_PahariEiJ_G0021089	Zc3h4	98	86.918	ENSMICG00000008786	ZC3H4	95	88.782	Microcebus_murinus
MGP_PahariEiJ_G0021089	Zc3h4	100	98.167	ENSMUSG00000059273	Zc3h4	100	98.167	Mus_musculus
MGP_PahariEiJ_G0021089	Zc3h4	100	97.458	MGP_SPRETEiJ_G0030312	Zc3h4	100	97.458	Mus_spretus
MGP_PahariEiJ_G0021089	Zc3h4	95	90.249	ENSMPUG00000005065	ZC3H4	95	88.662	Mustela_putorius_furo
MGP_PahariEiJ_G0021089	Zc3h4	100	92.442	ENSNGAG00000020090	Zc3h4	100	90.692	Nannospalax_galili
MGP_PahariEiJ_G0021089	Zc3h4	80	77.091	ENSMEUG00000009167	ZC3H4	73	84.081	Notamacropus_eugenii
MGP_PahariEiJ_G0021089	Zc3h4	88	89.924	ENSOPRG00000014889	ZC3H4	88	89.771	Ochotona_princeps
MGP_PahariEiJ_G0021089	Zc3h4	100	86.425	ENSODEG00000008320	ZC3H4	100	86.367	Octodon_degus
MGP_PahariEiJ_G0021089	Zc3h4	75	64.206	ENSOANG00000001794	ZC3H4	53	69.333	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0021089	Zc3h4	98	86.356	ENSOGAG00000031123	ZC3H4	77	87.843	Otolemur_garnettii
MGP_PahariEiJ_G0021089	Zc3h4	98	84.900	ENSPPRG00000023272	ZC3H4	95	85.944	Panthera_pardus
MGP_PahariEiJ_G0021089	Zc3h4	98	87.772	ENSPTRG00000011201	ZC3H4	95	87.229	Pan_troglodytes
MGP_PahariEiJ_G0021089	Zc3h4	98	87.852	ENSPANG00000021115	ZC3H4	95	87.309	Papio_anubis
MGP_PahariEiJ_G0021089	Zc3h4	98	69.952	ENSPSIG00000002241	ZC3H4	74	70.944	Pelodiscus_sinensis
MGP_PahariEiJ_G0021089	Zc3h4	100	96.653	ENSPEMG00000009762	Zc3h4	100	96.653	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021089	Zc3h4	93	89.085	ENSPPYG00000010167	ZC3H4	94	87.828	Pongo_abelii
MGP_PahariEiJ_G0021089	Zc3h4	73	81.494	ENSPCAG00000014919	ZC3H4	93	82.829	Procavia_capensis
MGP_PahariEiJ_G0021089	Zc3h4	98	86.677	ENSPCOG00000017169	ZC3H4	95	86.699	Propithecus_coquereli
MGP_PahariEiJ_G0021089	Zc3h4	94	83.207	ENSPVAG00000005687	ZC3H4	89	84.932	Pteropus_vampyrus
MGP_PahariEiJ_G0021089	Zc3h4	94	96.188	ENSRNOG00000015229	Zc3h4	100	87.620	Rattus_norvegicus
MGP_PahariEiJ_G0021089	Zc3h4	92	83.888	ENSRBIG00000027984	ZC3H4	95	77.912	Rhinopithecus_bieti
MGP_PahariEiJ_G0021089	Zc3h4	98	83.266	ENSRROG00000032920	ZC3H4	95	85.542	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021089	Zc3h4	92	88.835	ENSSBOG00000030914	ZC3H4	99	89.563	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021089	Zc3h4	84	85.443	ENSSARG00000014146	ZC3H4	74	88.235	Sorex_araneus
MGP_PahariEiJ_G0021089	Zc3h4	78	87.915	ENSSSCG00000003110	ZC3H4	78	74.603	Sus_scrofa
MGP_PahariEiJ_G0021089	Zc3h4	94	86.187	ENSVVUG00000000208	ZC3H4	98	75.848	Vulpes_vulpes