EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0021127 (Gene tree)
Gene ID: 110336469
Gene Symbol: Sympk
Alias: 1500016F02Rik|4632415H16Rik
Full Name: symplekin
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 29115 bases
Position: chr19:14537531-14566645
Accession: 110336469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0046021	Symplekin_C	PF12295.8	1.4e-73	1	1
MGP_PahariEiJ_P0046026	Symplekin_C	PF12295.8	5.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0046021	-	4099	XM_021219046	MGP_PahariEiJ_P0046021	1276 (aa)	XP_021074705	UPI000A309EDA
MGP_PahariEiJ_T0046023	-	4762	-	MGP_PahariEiJ_P0046023	233 (aa)	-	-
MGP_PahariEiJ_T0046022	-	841	-	MGP_PahariEiJ_P0046022	198 (aa)	-	-
MGP_PahariEiJ_T0046025	-	1073	-	-	- (aa)	-	-
MGP_PahariEiJ_T0046024	-	799	-	-	- (aa)	-	-
MGP_PahariEiJ_T0046027	-	616	-	-	- (aa)	-	-
MGP_PahariEiJ_T0046026	-	479	-	MGP_PahariEiJ_P0046026	142 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0021127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0021127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSG00000125755	SYMPK	100	99.296	Homo_sapiens
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSAPOG00000015934	sympk	97	73.648	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0021127	Sympk	100	93.667	ENSAMEG00000000680	SYMPK	100	93.901	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSACIG00000006357	sympk	92	74.817	Amphilophus_citrinellus
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSAOCG00000024124	sympk	92	74.472	Amphiprion_ocellaris
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSAPEG00000003465	sympk	92	73.422	Amphiprion_percula
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSATEG00000008472	sympk	91	74.439	Anabas_testudineus
MGP_PahariEiJ_G0021127	Sympk	77	96.330	ENSACAG00000004126	SYMPK	97	78.577	Anolis_carolinensis
MGP_PahariEiJ_G0021127	Sympk	100	94.449	ENSANAG00000021087	SYMPK	100	100.000	Aotus_nancymaae
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSACLG00000001813	sympk	91	74.281	Astatotilapia_calliptera
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSAMXG00000013677	sympk	91	73.684	Astyanax_mexicanus
MGP_PahariEiJ_G0021127	Sympk	100	93.120	ENSBTAG00000012101	SYMPK	100	93.432	Bos_taurus
MGP_PahariEiJ_G0021127	Sympk	95	97.170	ENSCJAG00000012172	SYMPK	99	95.767	Callithrix_jacchus
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSCAFG00000004376	SYMPK	100	94.292	Canis_familiaris
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSCAFG00020001815	SYMPK	100	94.292	Canis_lupus_dingo
MGP_PahariEiJ_G0021127	Sympk	100	93.511	ENSCHIG00000026784	SYMPK	100	93.745	Capra_hircus
MGP_PahariEiJ_G0021127	Sympk	100	94.067	ENSTSYG00000006268	SYMPK	100	98.400	Carlito_syrichta
MGP_PahariEiJ_G0021127	Sympk	83	94.559	ENSCAPG00000005112	SYMPK	96	94.559	Cavia_aperea
MGP_PahariEiJ_G0021127	Sympk	100	90.062	ENSCPOG00000010434	SYMPK	100	89.984	Cavia_porcellus
MGP_PahariEiJ_G0021127	Sympk	100	93.823	ENSCCAG00000036309	SYMPK	100	100.000	Cebus_capucinus
MGP_PahariEiJ_G0021127	Sympk	100	94.058	ENSCATG00000045107	SYMPK	100	99.200	Cercocebus_atys
MGP_PahariEiJ_G0021127	Sympk	100	93.823	ENSCLAG00000001206	SYMPK	100	93.745	Chinchilla_lanigera
MGP_PahariEiJ_G0021127	Sympk	100	94.058	ENSCSAG00000003115	SYMPK	100	94.297	Chlorocebus_sabaeus
MGP_PahariEiJ_G0021127	Sympk	77	99.083	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
MGP_PahariEiJ_G0021127	Sympk	98	82.911	ENSCPBG00000007170	SYMPK	99	83.134	Chrysemys_picta_bellii
MGP_PahariEiJ_G0021127	Sympk	77	64.220	ENSCING00000021232	-	96	48.918	Ciona_intestinalis
MGP_PahariEiJ_G0021127	Sympk	77	63.303	ENSCSAVG00000005154	-	100	47.887	Ciona_savignyi
MGP_PahariEiJ_G0021127	Sympk	100	91.693	ENSCANG00000040907	SYMPK	100	99.200	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0021127	Sympk	92	94.872	ENSCGRG00001010086	Sympk	100	94.872	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0021127	Sympk	77	84.404	ENSCSEG00000016802	sympk	91	73.812	Cynoglossus_semilaevis
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSCVAG00000015093	sympk	81	73.415	Cyprinodon_variegatus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSDARG00000059553	sympk	89	73.345	Danio_rerio
MGP_PahariEiJ_G0021127	Sympk	99	92.987	ENSDNOG00000016149	SYMPK	98	93.223	Dasypus_novemcinctus
MGP_PahariEiJ_G0021127	Sympk	82	52.991	FBgn0037371	Sym	95	36.444	Drosophila_melanogaster
MGP_PahariEiJ_G0021127	Sympk	77	81.651	ENSEBUG00000000387	sympk	89	62.558	Eptatretus_burgeri
MGP_PahariEiJ_G0021127	Sympk	100	93.516	ENSEASG00005014227	SYMPK	100	93.906	Equus_asinus_asinus
MGP_PahariEiJ_G0021127	Sympk	100	93.516	ENSECAG00000008163	SYMPK	100	93.906	Equus_caballus
MGP_PahariEiJ_G0021127	Sympk	77	98.165	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSELUG00000000850	sympk	88	75.157	Esox_lucius
MGP_PahariEiJ_G0021127	Sympk	99	97.674	ENSFCAG00000007337	SYMPK	100	94.214	Felis_catus
MGP_PahariEiJ_G0021127	Sympk	100	93.516	ENSFDAG00000011272	SYMPK	100	93.750	Fukomys_damarensis
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSFHEG00000010274	sympk	90	74.750	Fundulus_heteroclitus
MGP_PahariEiJ_G0021127	Sympk	89	75.000	ENSGMOG00000002357	sympk	99	72.970	Gadus_morhua
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSGAFG00000010976	sympk	91	74.887	Gambusia_affinis
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSGACG00000002735	sympk	98	74.587	Gasterosteus_aculeatus
MGP_PahariEiJ_G0021127	Sympk	77	95.413	ENSGAGG00000012538	-	88	84.580	Gopherus_agassizii
MGP_PahariEiJ_G0021127	Sympk	100	93.980	ENSGGOG00000003410	SYMPK	100	99.200	Gorilla_gorilla
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSHBUG00000023564	sympk	91	74.575	Haplochromis_burtoni
MGP_PahariEiJ_G0021127	Sympk	100	89.688	ENSHGLG00000005228	SYMPK	100	89.688	Heterocephalus_glaber_female
MGP_PahariEiJ_G0021127	Sympk	100	89.244	ENSHGLG00100018571	SYMPK	100	89.322	Heterocephalus_glaber_male
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSHCOG00000017400	sympk	91	70.577	Hippocampus_comes
MGP_PahariEiJ_G0021127	Sympk	77	88.073	ENSIPUG00000024020	SYMPK	95	69.942	Ictalurus_punctatus
MGP_PahariEiJ_G0021127	Sympk	100	94.605	ENSSTOG00000001534	SYMPK	100	94.840	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0021127	Sympk	100	93.828	ENSJJAG00000006633	Sympk	100	93.906	Jaculus_jaculus
MGP_PahariEiJ_G0021127	Sympk	77	84.404	ENSKMAG00000016292	sympk	90	74.771	Kryptolebias_marmoratus
MGP_PahariEiJ_G0021127	Sympk	77	88.073	ENSLBEG00000027913	sympk	96	70.785	Labrus_bergylta
MGP_PahariEiJ_G0021127	Sympk	77	93.578	ENSLACG00000016497	SYMPK	100	71.300	Latimeria_chalumnae
MGP_PahariEiJ_G0021127	Sympk	100	93.589	ENSLAFG00000008726	SYMPK	100	93.589	Loxodonta_africana
MGP_PahariEiJ_G0021127	Sympk	77	99.083	ENSMFAG00000030093	-	90	90.079	Macaca_fascicularis
MGP_PahariEiJ_G0021127	Sympk	100	94.058	ENSMMUG00000015428	SYMPK	100	99.200	Macaca_mulatta
MGP_PahariEiJ_G0021127	Sympk	100	94.292	ENSMNEG00000019439	SYMPK	100	99.200	Macaca_nemestrina
MGP_PahariEiJ_G0021127	Sympk	100	94.292	ENSMLEG00000040508	SYMPK	100	99.200	Mandrillus_leucophaeus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSMAMG00000010486	sympk	89	74.679	Mastacembelus_armatus
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSMZEG00005014146	sympk	91	74.281	Maylandia_zebra
MGP_PahariEiJ_G0021127	Sympk	100	94.906	ENSMAUG00000015657	Sympk	100	94.906	Mesocricetus_auratus
MGP_PahariEiJ_G0021127	Sympk	100	93.745	ENSMICG00000001871	SYMPK	100	97.600	Microcebus_murinus
MGP_PahariEiJ_G0021127	Sympk	100	97.109	ENSMOCG00000008388	Sympk	100	97.109	Microtus_ochrogaster
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSMMOG00000019227	sympk	93	72.495	Mola_mola
MGP_PahariEiJ_G0021127	Sympk	97	87.964	ENSMODG00000021534	SYMPK	96	87.932	Monodelphis_domestica
MGP_PahariEiJ_G0021127	Sympk	73	69.681	ENSMALG00000008347	sympk	96	70.000	Monopterus_albus
MGP_PahariEiJ_G0021127	Sympk	100	99.062	MGP_CAROLIEiJ_G0029267	Sympk	100	99.062	Mus_caroli
MGP_PahariEiJ_G0021127	Sympk	100	98.592	ENSMUSG00000023118	Sympk	100	98.292	Mus_musculus
MGP_PahariEiJ_G0021127	Sympk	100	97.975	MGP_SPRETEiJ_G0030351	-	100	97.975	Mus_spretus
MGP_PahariEiJ_G0021127	Sympk	100	92.260	ENSMPUG00000005505	SYMPK	100	92.494	Mustela_putorius_furo
MGP_PahariEiJ_G0021127	Sympk	77	99.083	ENSMLUG00000001359	SYMPK	100	90.089	Myotis_lucifugus
MGP_PahariEiJ_G0021127	Sympk	100	95.149	ENSNGAG00000000820	Sympk	100	95.149	Nannospalax_galili
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSNBRG00000018101	sympk	92	75.163	Neolamprologus_brichardi
MGP_PahariEiJ_G0021127	Sympk	100	80.841	ENSNLEG00000002369	SYMPK	100	81.231	Nomascus_leucogenys
MGP_PahariEiJ_G0021127	Sympk	77	98.165	ENSMEUG00000003866	SYMPK	80	91.228	Notamacropus_eugenii
MGP_PahariEiJ_G0021127	Sympk	100	91.719	ENSOPRG00000009967	SYMPK	100	91.719	Ochotona_princeps
MGP_PahariEiJ_G0021127	Sympk	100	94.219	ENSODEG00000007519	SYMPK	100	93.984	Octodon_degus
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSONIG00000016802	sympk	96	73.964	Oreochromis_niloticus
MGP_PahariEiJ_G0021127	Sympk	76	96.684	ENSOCUG00000005511	SYMPK	90	96.684	Oryctolagus_cuniculus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSORLG00000015338	sympk	96	74.367	Oryzias_latipes
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSORLG00020004402	sympk	90	75.574	Oryzias_latipes_hni
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSORLG00015005712	sympk	90	75.666	Oryzias_latipes_hsok
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSOMEG00000022561	sympk	90	75.369	Oryzias_melastigma
MGP_PahariEiJ_G0021127	Sympk	100	94.527	ENSOGAG00000013483	SYMPK	100	94.840	Otolemur_garnettii
MGP_PahariEiJ_G0021127	Sympk	100	88.673	ENSOARG00000010349	SYMPK	100	88.829	Ovis_aries
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSPPAG00000043204	SYMPK	100	99.200	Pan_paniscus
MGP_PahariEiJ_G0021127	Sympk	100	93.901	ENSPPRG00000004282	SYMPK	100	94.214	Panthera_pardus
MGP_PahariEiJ_G0021127	Sympk	100	91.712	ENSPTIG00000015420	SYMPK	100	91.790	Panthera_tigris_altaica
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSPTRG00000011169	SYMPK	100	99.200	Pan_troglodytes
MGP_PahariEiJ_G0021127	Sympk	100	93.980	ENSPANG00000019930	SYMPK	100	99.200	Papio_anubis
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSPKIG00000017132	sympk	96	72.458	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0021127	Sympk	100	97.185	ENSPEMG00000007564	Sympk	100	97.185	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0021127	Sympk	77	84.404	ENSPMAG00000004936	sympk	100	65.484	Petromyzon_marinus
MGP_PahariEiJ_G0021127	Sympk	98	87.283	ENSPCIG00000024476	SYMPK	99	86.813	Phascolarctos_cinereus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSPFOG00000001194	sympk	90	74.819	Poecilia_formosa
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSPLAG00000012995	sympk	90	74.728	Poecilia_latipinna
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSPMEG00000008099	sympk	90	74.728	Poecilia_mexicana
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSPREG00000006176	sympk	90	74.977	Poecilia_reticulata
MGP_PahariEiJ_G0021127	Sympk	87	97.032	ENSPPYG00000010135	SYMPK	99	97.032	Pongo_abelii
MGP_PahariEiJ_G0021127	Sympk	94	89.708	ENSPCAG00000005182	SYMPK	94	89.708	Procavia_capensis
MGP_PahariEiJ_G0021127	Sympk	100	94.527	ENSPCOG00000023740	SYMPK	100	99.200	Propithecus_coquereli
MGP_PahariEiJ_G0021127	Sympk	97	93.167	ENSPVAG00000001355	SYMPK	100	93.408	Pteropus_vampyrus
MGP_PahariEiJ_G0021127	Sympk	77	86.239	ENSPNYG00000011455	sympk	90	74.485	Pundamilia_nyererei
MGP_PahariEiJ_G0021127	Sympk	89	73.542	ENSPNAG00000016505	sympk	89	75.179	Pygocentrus_nattereri
MGP_PahariEiJ_G0021127	Sympk	100	98.203	ENSRNOG00000014353	Sympk	100	98.203	Rattus_norvegicus
MGP_PahariEiJ_G0021127	Sympk	99	94.118	ENSRBIG00000040963	SYMPK	100	99.200	Rhinopithecus_bieti
MGP_PahariEiJ_G0021127	Sympk	100	94.136	ENSRROG00000024834	SYMPK	97	97.665	Rhinopithecus_roxellana
MGP_PahariEiJ_G0021127	Sympk	100	94.292	ENSSBOG00000034497	SYMPK	100	100.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0021127	Sympk	90	90.476	ENSSHAG00000003139	SYMPK	99	90.476	Sarcophilus_harrisii
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSSFOG00015006974	sympk	90	75.914	Scleropages_formosus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSSMAG00000018130	sympk	72	74.158	Scophthalmus_maximus
MGP_PahariEiJ_G0021127	Sympk	93	70.539	ENSSDUG00000007092	sympk	91	74.101	Seriola_dumerili
MGP_PahariEiJ_G0021127	Sympk	93	70.691	ENSSLDG00000014774	sympk	96	71.757	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0021127	Sympk	77	99.083	ENSSARG00000004274	-	65	100.000	Sorex_araneus
MGP_PahariEiJ_G0021127	Sympk	97	82.035	ENSSPUG00000002789	SYMPK	96	81.250	Sphenodon_punctatus
MGP_PahariEiJ_G0021127	Sympk	77	87.156	ENSSPAG00000000854	sympk	90	74.549	Stegastes_partitus
MGP_PahariEiJ_G0021127	Sympk	100	94.058	ENSSSCG00000003093	SYMPK	100	94.214	Sus_scrofa
MGP_PahariEiJ_G0021127	Sympk	88	73.203	ENSTRUG00000010202	sympk	91	73.874	Takifugu_rubripes
MGP_PahariEiJ_G0021127	Sympk	77	83.486	ENSTNIG00000017855	sympk	98	73.333	Tetraodon_nigroviridis
MGP_PahariEiJ_G0021127	Sympk	88	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
MGP_PahariEiJ_G0021127	Sympk	100	85.692	ENSTTRG00000014311	SYMPK	100	85.927	Tursiops_truncatus
MGP_PahariEiJ_G0021127	Sympk	100	91.712	ENSUAMG00000022272	SYMPK	95	96.912	Ursus_americanus
MGP_PahariEiJ_G0021127	Sympk	100	93.823	ENSUMAG00000023698	SYMPK	100	94.136	Ursus_maritimus
MGP_PahariEiJ_G0021127	Sympk	89	96.482	ENSVVUG00000003024	SYMPK	99	96.482	Vulpes_vulpes
MGP_PahariEiJ_G0021127	Sympk	90	72.357	ENSXETG00000024453	sympk	94	72.444	Xenopus_tropicalis
MGP_PahariEiJ_G0021127	Sympk	78	84.685	ENSXCOG00000015368	sympk	100	74.283	Xiphophorus_couchianus
MGP_PahariEiJ_G0021127	Sympk	77	85.321	ENSXMAG00000005737	sympk	90	74.819	Xiphophorus_maculatus